RNA–Protein interactions for RNA: YDR234W

LYS4, Transcript of Homoaconitase, yeastyeast

Gene LYS4, Length 2,082 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LYS4YDR234W FKS3Q04952 1785 aa13.55□□□□□ -0.24
LYS4YDR234W CSI1Q04368 295 aa13.55□□□□□ -0.24
LYS4YDR234W MIF2P35201 549 aa13.53□□□□□ -0.24
LYS4YDR234W XKS1P42826 600 aa13.53□□□□□ -0.24
LYS4YDR234W RCR1P38212 213 aa13.52□□□□□ -0.24
LYS4YDR234W PTP3P40048 928 aa13.52□□□□□ -0.25
LYS4YDR234W YIR014WP40570 242 aa13.52□□□□□ -0.25
LYS4YDR234W YGR122WP53272 402 aa13.51□□□□□ -0.25
LYS4YDR234W SPO1P53541 631 aa13.51□□□□□ -0.25
LYS4YDR234W YNG2P38806 282 aaKnown RBP13.5□□□□□ -0.25
LYS4YDR234W TCB1Q12466 1186 aa13.5□□□□□ -0.25
LYS4YDR234W EDE1P34216 1381 aa13.49□□□□□ -0.25
LYS4YDR234W CTF4Q01454 927 aa13.48□□□□□ -0.25
LYS4YDR234W YPP1P46951 817 aa13.48□□□□□ -0.25
LYS4YDR234W NSE3Q05541 303 aa13.46□□□□□ -0.26
LYS4YDR234W RAD24P32641 659 aa13.45□□□□□ -0.26
LYS4YDR234W RPS19AP07280 144 aaKnown RBP13.44□□□□□ -0.26
LYS4YDR234W RPS19BP07281 144 aaPredicted RBP13.44□□□□□ -0.26
LYS4YDR234W KCC4P25389 1037 aa13.44□□□□□ -0.26
LYS4YDR234W UGA3P26370 528 aa13.44□□□□□ -0.26
LYS4YDR234W INP54Q08227 384 aaKnown RBP13.44□□□□□ -0.26
LYS4YDR234W RAD4P14736 754 aa13.44□□□□□ -0.26
LYS4YDR234W NUP145P49687 1317 aa13.43□□□□□ -0.26
LYS4YDR234W SWC3P31376 625 aa13.43□□□□□ -0.26
LYS4YDR234W ZDS2P54786 942 aa13.43□□□□□ -0.26
LYS4YDR234W NKP2Q06162 153 aa13.43□□□□□ -0.26
LYS4YDR234W RFC1P38630 861 aaKnown RBP13.42□□□□□ -0.26
LYS4YDR234W ALE1Q08548 619 aa13.42□□□□□ -0.26
LYS4YDR234W PCT1P13259 424 aa13.41□□□□□ -0.26
LYS4YDR234W NMD2P38798 1089 aaKnown RBP13.41□□□□□ -0.26
LYS4YDR234W YOL057WQ08225 711 aa13.41□□□□□ -0.26
LYS4YDR234W EAF7P53911 425 aaKnown RBP13.4□□□□□ -0.26
LYS4YDR234W NOP8Q08287 484 aaPredicted RBP13.4□□□□□ -0.26
LYS4YDR234W REB1P21538 810 aa13.38□□□□□ -0.27
LYS4YDR234W ADE16P54113 591 aaKnown RBP13.38□□□□□ -0.27
LYS4YDR234W RLF2Q12495 606 aa13.38□□□□□ -0.27
LYS4YDR234W ENT1Q12518 454 aa13.38□□□□□ -0.27
LYS4YDR234W RSF2P46974 1380 aa13.37□□□□□ -0.27
LYS4YDR234W MRP7P12687 371 aa13.37□□□□□ -0.27
LYS4YDR234W DJP1P40564 432 aa13.36□□□□□ -0.27
LYS4YDR234W ECM16Q04217 1267 aaKnown RBP13.35□□□□□ -0.27
LYS4YDR234W YDR306CQ06640 478 aa13.35□□□□□ -0.27
LYS4YDR234W CLC1P17891 233 aa13.34□□□□□ -0.27
LYS4YDR234W OSM1P21375 501 aaKnown RBP13.34□□□□□ -0.27
LYS4YDR234W BOI2P39969 1040 aa13.33□□□□□ -0.27
LYS4YDR234W LYS2P07702 1392 aa13.33□□□□□ -0.28
LYS4YDR234W NUP133P36161 1157 aa13.32□□□□□ -0.28
LYS4YDR234W BRN1P38170 754 aa13.32□□□□□ -0.28
LYS4YDR234W IES2P40154 320 aa13.32□□□□□ -0.28
LYS4YDR234W APP1P53933 587 aa13.32□□□□□ -0.28
LYS4YDR234W FRK1Q03002 865 aaPredicted RBP13.32□□□□□ -0.28
LYS4YDR234W RAD50P12753 1312 aa13.32□□□□□ -0.28
LYS4YDR234W DLD1P32891 587 aa13.31□□□□□ -0.28
LYS4YDR234W GCD7P32502 381 aaPredicted RBP13.3□□□□□ -0.28
LYS4YDR234W MEC3Q02574 474 aa13.3□□□□□ -0.28
LYS4YDR234W ENV9Q08651 330 aa13.3□□□□□ -0.28
LYS4YDR234W YRF1-3P0CX14 1859 aa13.3□□□□□ -0.28
LYS4YDR234W YRF1-7P0CX15 1859 aa13.3□□□□□ -0.28
LYS4YDR234W YRF1-6P53819 1859 aa13.3□□□□□ -0.28
LYS4YDR234W YKL133CP36066 463 aa13.29□□□□□ -0.28
LYS4YDR234W SNF7P39929 240 aaKnown RBP13.29□□□□□ -0.28
LYS4YDR234W BDP1P46678 594 aa13.28□□□□□ -0.28
LYS4YDR234W GCR2Q01722 534 aa13.28□□□□□ -0.28
LYS4YDR234W DNM1P54861 757 aa13.28□□□□□ -0.28
LYS4YDR234W VPS64Q03944 604 aa13.27□□□□□ -0.28
LYS4YDR234W ATG13Q06628 738 aa13.27□□□□□ -0.29
LYS4YDR234W SWI1P09547 1314 aa13.26□□□□□ -0.29
LYS4YDR234W ROX1P25042 368 aa13.26□□□□□ -0.29
LYS4YDR234W HXT13P39924 564 aa13.26□□□□□ -0.29
LYS4YDR234W YBP2P53169 641 aa13.26□□□□□ -0.29
LYS4YDR234W CST6P40535 587 aa13.25□□□□□ -0.29
LYS4YDR234W HXT17P53631 564 aa13.25□□□□□ -0.29
LYS4YDR234W CDC16P09798 840 aa13.25□□□□□ -0.29
LYS4YDR234W VPS24P36095 224 aaKnown RBP13.24□□□□□ -0.29
LYS4YDR234W TUM1Q08686 304 aaKnown RBP13.24□□□□□ -0.29
LYS4YDR234W VAS1P07806 1104 aaKnown RBP13.23□□□□□ -0.29
LYS4YDR234W APL2P36000 726 aaPredicted RBP13.23□□□□□ -0.29
LYS4YDR234W RMD1Q03441 430 aa13.23□□□□□ -0.29
LYS4YDR234W LPD1P09624 499 aaKnown RBP13.22□□□□□ -0.29
LYS4YDR234W SRS2P12954 1174 aa13.22□□□□□ -0.29
LYS4YDR234W ITC1P53125 1264 aa13.22□□□□□ -0.29
LYS4YDR234W RMT2Q03305 412 aa13.22□□□□□ -0.29
LYS4YDR234W YPR148CQ06523 435 aa13.22□□□□□ -0.29
LYS4YDR234W UBP12P39538 1254 aa13.2□□□□□ -0.3
LYS4YDR234W YFR006WP43590 535 aa13.2□□□□□ -0.3
LYS4YDR234W ROM2P51862 1356 aaKnown RBP13.2□□□□□ -0.3
LYS4YDR234W HXT10P43581 546 aa13.19□□□□□ -0.3
LYS4YDR234W MSP1P28737 362 aa13.18□□□□□ -0.3
LYS4YDR234W NOP53Q12080 455 aaKnown RBP13.18□□□□□ -0.3
LYS4YDR234W YJR008WP47085 338 aa13.17□□□□□ -0.3
LYS4YDR234W YPR204WQ08995 1032 aa13.17□□□□□ -0.3
LYS4YDR234W HGH1P48362 394 aaKnown RBP13.17□□□□□ -0.3
LYS4YDR234W LSP1Q12230 341 aaKnown RBP13.17□□□□□ -0.3
LYS4YDR234W COBP00163 385 aa13.16□□□□□ -0.3
LYS4YDR234W SLA1P32790 1244 aa13.16□□□□□ -0.3
LYS4YDR234W FCP1Q03254 732 aa13.16□□□□□ -0.3
LYS4YDR234W NOT3P06102 836 aaKnown RBP13.15□□□□□ -0.3
LYS4YDR234W IMH1Q06704 911 aaKnown RBP13.15□□□□□ -0.3
LYS4YDR234W SLN1P39928 1220 aaPredicted RBP13.14□□□□□ -0.31
LYS4YDR234W NCB2Q92317 146 aa13.14□□□□□ -0.31
Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms