RNA–Protein interactions for RNA: YDR121W

DPB4, Transcript of Subunit of DNA pol epsilon and of ISW2 chromatin accessibility complex, yeastyeast

Gene DPB4, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DPB4YDR121W PTC2P39966 464 aaKnown RBP6.34□□□□□ -1.39
DPB4YDR121W YGR273CP53329 174 aa6.34□□□□□ -1.39
DPB4YDR121W YMR196WQ04336 1088 aa6.34□□□□□ -1.39
DPB4YDR121W NOP53Q12080 455 aaKnown RBP6.33□□□□□ -1.4
DPB4YDR121W SET1P38827 1080 aaKnown RBP6.31□□□□□ -1.4
DPB4YDR121W VPS70P47161 811 aa6.31□□□□□ -1.4
DPB4YDR121W NMA111P53920 997 aa6.3□□□□□ -1.4
DPB4YDR121W SLI15P38283 698 aa6.29□□□□□ -1.4
DPB4YDR121W BUD21Q08492 214 aaPredicted RBP6.29□□□□□ -1.4
DPB4YDR121W RLF2Q12495 606 aa6.29□□□□□ -1.4
DPB4YDR121W YPR015CQ12531 247 aa6.29□□□□□ -1.4
DPB4YDR121W RAS1P01119 309 aa6.28□□□□□ -1.4
DPB4YDR121W RAM1P22007 431 aa6.28□□□□□ -1.4
DPB4YDR121W YPR148CQ06523 435 aa6.27□□□□□ -1.41
DPB4YDR121W DPL1Q05567 589 aa6.26□□□□□ -1.41
DPB4YDR121W GLN1P32288 370 aaKnown RBP6.25□□□□□ -1.41
DPB4YDR121W GCN2P15442 1659 aa6.25□□□□□ -1.41
DPB4YDR121W PDR11P40550 1411 aa6.25□□□□□ -1.41
DPB4YDR121W NUP192P47054 1683 aa6.23□□□□□ -1.41
DPB4YDR121W APP1P53933 587 aa6.23□□□□□ -1.41
DPB4YDR121W KRE5P22023 1365 aa6.22□□□□□ -1.41
DPB4YDR121W CFT1Q06632 1357 aaKnown RBP6.22□□□□□ -1.41
DPB4YDR121W BCK1Q01389 1478 aa6.21□□□□□ -1.42
DPB4YDR121W YRF1-2P40105 1681 aa6.2□□□□□ -1.42
DPB4YDR121W SDH2P21801 266 aa6.18□□□□□ -1.42
DPB4YDR121W ISU2Q12056 156 aa6.18□□□□□ -1.42
DPB4YDR121W KEX1P09620 729 aa6.17□□□□□ -1.42
DPB4YDR121W KIN1P13185 1064 aa6.17□□□□□ -1.42
DPB4YDR121W AMS1P22855 1083 aa6.17□□□□□ -1.42
DPB4YDR121W DSF2P38213 736 aa6.17□□□□□ -1.42
DPB4YDR121W RIA1P53893 1110 aa6.17□□□□□ -1.42
DPB4YDR121W PBS2P08018 668 aa6.16□□□□□ -1.42
DPB4YDR121W RRP5Q05022 1729 aaKnown RBP6.16□□□□□ -1.42
DPB4YDR121W TRK1P12685 1235 aa6.14□□□□□ -1.43
DPB4YDR121W YNR029CP53729 429 aaKnown RBP6.14□□□□□ -1.43
DPB4YDR121W CDC73Q06697 393 aa6.14□□□□□ -1.43
DPB4YDR121W SSM4P40318 1319 aa6.14□□□□□ -1.43
DPB4YDR121W TY3B-IQ7LHG5 1498 aaKnown RBP6.14□□□□□ -1.43
DPB4YDR121W YNR021WP53723 404 aaKnown RBP6.13□□□□□ -1.43
DPB4YDR121W GLC3P32775 704 aa6.12□□□□□ -1.43
DPB4YDR121W MRX12P47084 519 aa6.12□□□□□ -1.43
DPB4YDR121W IKI3Q06706 1349 aaKnown RBP6.12□□□□□ -1.43
DPB4YDR121W TY4B-HP0C2J7 1802 aa6.11□□□□□ -1.43
DPB4YDR121W TY4B-JP47024 1803 aa6.11□□□□□ -1.43
DPB4YDR121W PDR1P12383 1068 aa6.1□□□□□ -1.43
DPB4YDR121W YMR074CQ04773 145 aa6.1□□□□□ -1.43
DPB4YDR121W UBP14P38237 781 aaKnown RBP6.09□□□□□ -1.43
DPB4YDR121W SAS4Q04003 481 aa6.09□□□□□ -1.43
DPB4YDR121W YLR326WQ06170 240 aaKnown RBP6.09□□□□□ -1.43
DPB4YDR121W GYP1Q08484 637 aa6.09□□□□□ -1.43
DPB4YDR121W IES2P40154 320 aa6.08□□□□□ -1.44
DPB4YDR121W MAM3Q12296 706 aa6.08□□□□□ -1.44
DPB4YDR121W ENT1Q12518 454 aa6.08□□□□□ -1.44
DPB4YDR121W RAV1P47104 1357 aa6.07□□□□□ -1.44
DPB4YDR121W RAD9P14737 1309 aa6.07□□□□□ -1.44
DPB4YDR121W ENV9Q08651 330 aa6.07□□□□□ -1.44
DPB4YDR121W CAB1Q04430 367 aa6.06□□□□□ -1.44
DPB4YDR121W HGH1P48362 394 aaKnown RBP6.05□□□□□ -1.44
DPB4YDR121W IMH1Q06704 911 aaKnown RBP6.05□□□□□ -1.44
DPB4YDR121W AIM7Q12156 149 aa6.05□□□□□ -1.44
DPB4YDR121W URB1P34241 1764 aaKnown RBP6.05□□□□□ -1.44
DPB4YDR121W FKS3Q04952 1785 aa6.04□□□□□ -1.44
DPB4YDR121W PCS60P38137 543 aaKnown RBP RIP-Chip data6.04□□□□□ -1.44not detected
DPB4YDR121W DIT2P21595 489 aa6.03□□□□□ -1.44
DPB4YDR121W GUA1P38625 525 aaKnown RBP6.02□□□□□ -1.45
DPB4YDR121W YPL062WQ02781 134 aa6.02□□□□□ -1.45
DPB4YDR121W REF2P42073 533 aaPredicted RBP6.01□□□□□ -1.45
DPB4YDR121W ALD4P46367 519 aaKnown RBP6.01□□□□□ -1.45
DPB4YDR121W NUP42P49686 430 aaKnown RBP6.01□□□□□ -1.45
DPB4YDR121W BUD20Q08004 166 aaPredicted RBP6□□□□□ -1.45
DPB4YDR121W YEL077CQ3E7X8 1277 aa6□□□□□ -1.45
DPB4YDR121W RTC1Q08281 1341 aa5.99□□□□□ -1.45
DPB4YDR121W VHR2P40041 505 aa5.99□□□□□ -1.45
DPB4YDR121W GAP1P19145 602 aaPredicted RBP5.97□□□□□ -1.45
DPB4YDR121W RAD54P32863 898 aa5.97□□□□□ -1.45
DPB4YDR121W PRP45P28004 379 aaPredicted RBP5.96□□□□□ -1.46
DPB4YDR121W MRF1P30775 413 aaPredicted RBP5.96□□□□□ -1.46
DPB4YDR121W PAF1P38351 445 aa5.96□□□□□ -1.46
DPB4YDR121W MAK21Q12176 1025 aaKnown RBP5.96□□□□□ -1.46
DPB4YDR121W YRF1-3P0CX14 1859 aa5.96□□□□□ -1.46
DPB4YDR121W YRF1-7P0CX15 1859 aa5.96□□□□□ -1.46
DPB4YDR121W YRF1-6P53819 1859 aa5.96□□□□□ -1.46
DPB4YDR121W YIL177CP40434 1758 aa5.95□□□□□ -1.46
DPB4YDR121W YJL225CP40889 1758 aa5.95□□□□□ -1.46
DPB4YDR121W STR2P47164 639 aa5.95□□□□□ -1.46
DPB4YDR121W ATF2P53296 535 aa5.95□□□□□ -1.46
DPB4YDR121W YDR090CQ03193 310 aa5.95□□□□□ -1.46
DPB4YDR121W PRT1P06103 763 aaKnown RBP5.94□□□□□ -1.46
DPB4YDR121W CPS1P27614 576 aa5.94□□□□□ -1.46
DPB4YDR121W TFB3Q03290 321 aa5.94□□□□□ -1.46
DPB4YDR121W YML020WQ03722 664 aa5.94□□□□□ -1.46
DPB4YDR121W TAF5P38129 798 aa5.93□□□□□ -1.46
DPB4YDR121W HPC2Q01448 625 aa5.93□□□□□ -1.46
DPB4YDR121W RPP1BP10622 106 aaKnown RBP5.92□□□□□ -1.46
DPB4YDR121W ISM1P48526 1002 aa5.92□□□□□ -1.46
DPB4YDR121W RCM1P53972 490 aa5.92□□□□□ -1.46
DPB4YDR121W PSK1P31374 1356 aa5.92□□□□□ -1.46
DPB4YDR121W PPH3P32345 308 aa5.91□□□□□ -1.46
DPB4YDR121W AIR1P40507 360 aaKnown RBP5.91□□□□□ -1.46
DPB4YDR121W RPN11P43588 306 aaKnown RBP5.91□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 159.5 ms