RNA–Protein interactions for RNA: YDL130W

RPP1B, Transcript of Ribosomal protein P1 beta, yeastyeast

Gene RPP1B, Length 321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPP1BYDL130W MSB4Q12317 492 aa20.29■□□□□ 0.84
RPP1BYDL130W CTF4Q01454 927 aa20.28■□□□□ 0.84
RPP1BYDL130W SPT7P35177 1332 aa20.27■□□□□ 0.83
RPP1BYDL130W GRX1P25373 110 aaKnown RBP20.22■□□□□ 0.83
RPP1BYDL130W BDF1P35817 686 aa20.22■□□□□ 0.83
RPP1BYDL130W NUP145P49687 1317 aa20.22■□□□□ 0.83
RPP1BYDL130W YBP2P53169 641 aa20.21■□□□□ 0.83
RPP1BYDL130W RIM15P43565 1770 aa20.19■□□□□ 0.82
RPP1BYDL130W AOS1Q06624 347 aa20.19■□□□□ 0.82
RPP1BYDL130W ALD3P54114 506 aa20.17■□□□□ 0.82
RPP1BYDL130W GRE2Q12068 342 aaKnown RBP20.17■□□□□ 0.82
RPP1BYDL130W RAD4P14736 754 aa20.16■□□□□ 0.82
RPP1BYDL130W RRP46P53256 223 aaPredicted RBP20.16■□□□□ 0.82
RPP1BYDL130W RPG1P38249 964 aaKnown RBP20.15■□□□□ 0.82
RPP1BYDL130W BUG1Q12191 341 aa20.15■□□□□ 0.82
RPP1BYDL130W NTH2P35172 780 aa20.12■□□□□ 0.81
RPP1BYDL130W TUM1Q08686 304 aaKnown RBP20.1■□□□□ 0.81
RPP1BYDL130W KCC4P25389 1037 aa20.08■□□□□ 0.81
RPP1BYDL130W RTR1P40084 226 aaPredicted RBP20.07■□□□□ 0.8
RPP1BYDL130W UTP22P53254 1237 aaPredicted RBP20.05■□□□□ 0.8
RPP1BYDL130W RMT2Q03305 412 aa20.05■□□□□ 0.8
RPP1BYDL130W IOC4Q04213 475 aa20.05■□□□□ 0.8
RPP1BYDL130W ALE1Q08548 619 aa20.01■□□□□ 0.79
RPP1BYDL130W PRD1P25375 712 aa20■□□□□ 0.79
RPP1BYDL130W YNL050CP53952 270 aa19.99■□□□□ 0.79
RPP1BYDL130W TOS1P38288 455 aa19.98■□□□□ 0.79
RPP1BYDL130W UGA3P26370 528 aa19.97■□□□□ 0.79
RPP1BYDL130W HPC2Q01448 625 aa19.97■□□□□ 0.79
RPP1BYDL130W NOP53Q12080 455 aaKnown RBP19.96■□□□□ 0.79
RPP1BYDL130W NSE3Q05541 303 aa19.94■□□□□ 0.78
RPP1BYDL130W BUD27P43573 796 aaKnown RBP RIP-Chip data19.93■□□□□ 0.78not detected
RPP1BYDL130W SAP155P43612 1002 aa19.93■□□□□ 0.78
RPP1BYDL130W NYV1Q12255 253 aa19.93■□□□□ 0.78
RPP1BYDL130W TEA1P47988 759 aa19.92■□□□□ 0.78
RPP1BYDL130W MDG1P53885 366 aa19.92■□□□□ 0.78
RPP1BYDL130W SSA1P10591 642 aaKnown RBP19.9■□□□□ 0.78
RPP1BYDL130W ZDS1P50111 915 aaKnown RBP19.9■□□□□ 0.78
RPP1BYDL130W MPP10P47083 593 aaKnown RBP19.89■□□□□ 0.77
RPP1BYDL130W THI22Q06490 572 aa19.88■□□□□ 0.77
RPP1BYDL130W PHM7Q12252 991 aa19.88■□□□□ 0.77
RPP1BYDL130W RIX7Q07844 837 aaKnown RBP19.87■□□□□ 0.77
RPP1BYDL130W SER1P33330 395 aaKnown RBP19.85■□□□□ 0.77
RPP1BYDL130W MAM1P40065 302 aa19.85■□□□□ 0.77
RPP1BYDL130W EAF6P47128 113 aa19.85■□□□□ 0.77
RPP1BYDL130W YDL144CQ07589 356 aa19.85■□□□□ 0.77
RPP1BYDL130W SSP2Q08646 371 aa19.85■□□□□ 0.77
RPP1BYDL130W MSN5P52918 1224 aa19.84■□□□□ 0.77
RPP1BYDL130W CTI6Q08923 506 aa19.84■□□□□ 0.77
RPP1BYDL130W RRT14P40470 206 aa19.83■□□□□ 0.77
RPP1BYDL130W YFR016CP43597 1233 aaKnown RBP19.83■□□□□ 0.77
RPP1BYDL130W RTT109Q07794 436 aa19.8■□□□□ 0.76
RPP1BYDL130W BMS1Q08965 1183 aaKnown RBP19.8■□□□□ 0.76
RPP1BYDL130W LYS2P07702 1392 aa19.8■□□□□ 0.76
RPP1BYDL130W YGL082WP53155 381 aa19.79■□□□□ 0.76
RPP1BYDL130W COQ4O13525 335 aa19.78■□□□□ 0.76
RPP1BYDL130W LPD1P09624 499 aaKnown RBP19.77■□□□□ 0.76
RPP1BYDL130W YBR287WP38355 427 aa19.77■□□□□ 0.76
RPP1BYDL130W GYP7P48365 746 aa19.77■□□□□ 0.76
RPP1BYDL130W TPD3P31383 635 aa19.75■□□□□ 0.75
RPP1BYDL130W CTT1P06115 562 aa19.73■□□□□ 0.75
RPP1BYDL130W YKL222CP35995 705 aa19.73■□□□□ 0.75
RPP1BYDL130W HEF3P53978 1044 aaKnown RBP19.71■□□□□ 0.75
RPP1BYDL130W RAT1Q02792 1006 aaKnown RBP19.71■□□□□ 0.75
RPP1BYDL130W ARG8P18544 423 aa19.7■□□□□ 0.74
RPP1BYDL130W ERT1P38140 529 aa19.7■□□□□ 0.74
RPP1BYDL130W ZDS2P54786 942 aa19.7■□□□□ 0.74
RPP1BYDL130W APL2P36000 726 aaPredicted RBP19.69■□□□□ 0.74
RPP1BYDL130W CWH41P53008 833 aa19.69■□□□□ 0.74
RPP1BYDL130W VPS64Q03944 604 aa19.69■□□□□ 0.74
RPP1BYDL130W UTP10P42945 1769 aaKnown RBP19.69■□□□□ 0.74
RPP1BYDL130W YER156CP40093 338 aaKnown RBP19.68■□□□□ 0.74
RPP1BYDL130W YOL057WQ08225 711 aa19.67■□□□□ 0.74
RPP1BYDL130W YPR204WQ08995 1032 aa19.67■□□□□ 0.74
RPP1BYDL130W RPP0P05317 312 aaKnown RBP19.65■□□□□ 0.74
RPP1BYDL130W DCD1P06773 312 aa19.65■□□□□ 0.74
RPP1BYDL130W PFF1P38244 976 aa19.65■□□□□ 0.74
RPP1BYDL130W KIN4Q01919 800 aa19.63■□□□□ 0.73
RPP1BYDL130W DIB1Q06819 143 aaPredicted RBP19.63■□□□□ 0.73
RPP1BYDL130W BDF2Q07442 638 aa19.62■□□□□ 0.73
RPP1BYDL130W SRT1Q03175 343 aa19.61■□□□□ 0.73
RPP1BYDL130W IRC3Q06683 689 aa19.6■□□□□ 0.73
RPP1BYDL130W SUI2P20459 304 aaKnown RBP19.59■□□□□ 0.73
RPP1BYDL130W SMY1P32364 656 aaKnown RBP19.59■□□□□ 0.73
RPP1BYDL130W DNM1P54861 757 aa19.59■□□□□ 0.73
RPP1BYDL130W VPS27P40343 622 aaKnown RBP19.58■□□□□ 0.72
RPP1BYDL130W PKH1Q03407 766 aa19.55■□□□□ 0.72
RPP1BYDL130W HAT1Q12341 374 aa19.55■□□□□ 0.72
RPP1BYDL130W ERO1Q03103 563 aa19.54■□□□□ 0.72
RPP1BYDL130W YLR271WQ06152 274 aa19.54■□□□□ 0.72
RPP1BYDL130W SSK22P25390 1331 aaPredicted RBP19.52■□□□□ 0.72
RPP1BYDL130W CST6P40535 587 aa19.52■□□□□ 0.72
RPP1BYDL130W CDC45Q08032 650 aa19.52■□□□□ 0.72
RPP1BYDL130W YDR306CQ06640 478 aa19.51■□□□□ 0.71
RPP1BYDL130W SWI1P09547 1314 aa19.51■□□□□ 0.71
RPP1BYDL130W CAF20P12962 161 aaKnown RBP19.5■□□□□ 0.71
RPP1BYDL130W SQS1P53866 767 aaKnown RBP19.5■□□□□ 0.71
RPP1BYDL130W MRP7P12687 371 aa19.49■□□□□ 0.71
RPP1BYDL130W SIT4P20604 311 aa19.49■□□□□ 0.71
RPP1BYDL130W NUP133P36161 1157 aa19.47■□□□□ 0.71
RPP1BYDL130W YJR008WP47085 338 aa19.45■□□□□ 0.7
Retrieved 100 of 5,963 RNA–protein pairs in 47.5 ms