RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 GGT6Q6P531 493 aa25.8■■□□□ 1.72
PHGDH-230ENST00000641927 UNC13BO14795 1591 aa25.79■■□□□ 1.72
PHGDH-230ENST00000641927 CCER1Q8TC90 406 aaPredicted RBP25.77■■□□□ 1.72
PHGDH-230ENST00000641927 KANK1Q14678 1352 aa25.76■■□□□ 1.71
PHGDH-230ENST00000641927 BCORL1Q5H9F3 1711 aa25.76■■□□□ 1.71
PHGDH-230ENST00000641927 SIGLEC1Q9BZZ2 1709 aa25.76■■□□□ 1.71
PHGDH-230ENST00000641927 AGLP35573 1532 aa25.76■■□□□ 1.71
PHGDH-230ENST00000641927 DEPDC5O75140 1603 aa25.76■■□□□ 1.71
PHGDH-230ENST00000641927 SLC4A1APQ9BWU0 796 aaKnown RBP25.75■■□□□ 1.71
PHGDH-230ENST00000641927 DHX57Q6P158 1386 aaKnown RBP25.75■■□□□ 1.71
PHGDH-230ENST00000641927 RNF17Q9BXT8 1623 aaKnown RBP25.75■■□□□ 1.71
PHGDH-230ENST00000641927 MPHOSPH9Q99550 1183 aa25.74■■□□□ 1.71
PHGDH-230ENST00000641927 MLECQ14165 292 aa25.74■■□□□ 1.71
PHGDH-230ENST00000641927 PRDM15P57071 1507 aaPredicted RBP25.72■■□□□ 1.71
PHGDH-230ENST00000641927 MROH1Q8NDA8 1641 aa25.72■■□□□ 1.71
PHGDH-230ENST00000641927 KDM5DQ9BY66 1539 aa25.72■■□□□ 1.71
PHGDH-230ENST00000641927 PZPP20742 1482 aa25.71■■□□□ 1.71
PHGDH-230ENST00000641927 FAM135AQ9P2D6 1515 aa25.71■■□□□ 1.71
PHGDH-230ENST00000641927 IQGAP3Q86VI3 1631 aa25.69■■□□□ 1.7
PHGDH-230ENST00000641927 WASHC2CQ9Y4E1 1318 aa25.68■■□□□ 1.7
PHGDH-230ENST00000641927 PKD2Q13563 968 aa25.65■■□□□ 1.7
PHGDH-230ENST00000641927 VWDEQ8N2E2 1590 aa25.65■■□□□ 1.7
PHGDH-230ENST00000641927 FOXD1Q16676 465 aa25.64■■□□□ 1.69
PHGDH-230ENST00000641927 CEP152O94986 1710 aa25.62■■□□□ 1.69
PHGDH-230ENST00000641927 ESF1Q9H501 851 aaKnown RBP25.62■■□□□ 1.69
PHGDH-230ENST00000641927 ABCC3O15438 1527 aa25.61■■□□□ 1.69
PHGDH-230ENST00000641927 PPP6R1Q9UPN7 881 aa25.6■■□□□ 1.69
PHGDH-230ENST00000641927 TET3O43151 1660 aa25.59■■□□□ 1.69
PHGDH-230ENST00000641927 LMTK2Q8IWU2 1503 aa25.58■■□□□ 1.69
PHGDH-230ENST00000641927 ZC3H13Q5T200 1668 aaKnown RBP25.58■■□□□ 1.68
PHGDH-230ENST00000641927 CLTCQ00610 1675 aaKnown RBP25.55■■□□□ 1.68
PHGDH-230ENST00000641927 EFCAB6Q5THR3 1501 aa25.54■■□□□ 1.68
PHGDH-230ENST00000641927 CAMSAP1Q5T5Y3 1602 aa25.54■■□□□ 1.68
PHGDH-230ENST00000641927 E9PCH4 1651 aa25.53■■□□□ 1.68
PHGDH-230ENST00000641927 CLSPNQ9HAW4 1339 aa25.51■■□□□ 1.67
PHGDH-230ENST00000641927 NPATQ14207 1427 aa25.49■■□□□ 1.67
PHGDH-230ENST00000641927 FER1L4A9Z1Z3 1794 aa25.47■■□□□ 1.67
PHGDH-230ENST00000641927 ANKRD30BQ9BXX2 1392 aa25.47■■□□□ 1.67
PHGDH-230ENST00000641927 CNTLNQ9NXG0 1405 aa25.47■■□□□ 1.67
PHGDH-230ENST00000641927 RPRD2Q5VT52 1461 aaKnown RBP25.46■■□□□ 1.67
PHGDH-230ENST00000641927 NEUROD1Q13562 356 aa25.45■■□□□ 1.67
PHGDH-230ENST00000641927 SIN3AQ96ST3 1273 aa25.45■■□□□ 1.67
PHGDH-230ENST00000641927 ZMYM3Q14202 1370 aa25.45■■□□□ 1.66
PHGDH-230ENST00000641927 ARHGAP31Q2M1Z3 1444 aa25.44■■□□□ 1.66
PHGDH-230ENST00000641927 CFAP65Q6ZU64 1925 aaKnown RBP25.43■■□□□ 1.66
PHGDH-230ENST00000641927 MADDQ8WXG6 1647 aa25.42■■□□□ 1.66
PHGDH-230ENST00000641927 PLPPR3Q6T4P5 718 aa25.41■■□□□ 1.66
PHGDH-230ENST00000641927 SPHKAPQ2M3C7 1700 aa25.41■■□□□ 1.66
PHGDH-230ENST00000641927 ADAMTSL3P82987 1691 aa25.4■■□□□ 1.66
PHGDH-230ENST00000641927 PLA2R1Q13018 1463 aa25.4■■□□□ 1.66
PHGDH-230ENST00000641927 MROH2AA6NES4 1674 aa25.4■■□□□ 1.66
PHGDH-230ENST00000641927 FBXO31Q5XUX0 539 aaPredicted RBP25.39■■□□□ 1.66
PHGDH-230ENST00000641927 CCDC144AA2RUR9 1427 aa25.38■■□□□ 1.65
PHGDH-230ENST00000641927 PTPRTO14522 1441 aa25.38■■□□□ 1.65
PHGDH-230ENST00000641927 RIMS1Q86UR5 1692 aaKnown RBP25.38■■□□□ 1.65
PHGDH-230ENST00000641927 TRPM2O94759 1503 aa25.37■■□□□ 1.65
PHGDH-230ENST00000641927 CEBPAP49715 358 aaPredicted RBP25.36■■□□□ 1.65
PHGDH-230ENST00000641927 PREX1Q8TCU6 1659 aa25.36■■□□□ 1.65
PHGDH-230ENST00000641927 ERVK-7P63135 1459 aa25.34■■□□□ 1.65
PHGDH-230ENST00000641927 NOS1P29475 1434 aa25.34■■□□□ 1.65
PHGDH-230ENST00000641927 C3P01024 1663 aa25.33■■□□□ 1.64
PHGDH-230ENST00000641927 UGGT1Q9NYU2 1555 aa25.31■■□□□ 1.64
PHGDH-230ENST00000641927 SYNMO15061 1565 aa25.3■■□□□ 1.64
PHGDH-230ENST00000641927 CLTCL1P53675 1640 aa25.29■■□□□ 1.64
PHGDH-230ENST00000641927 SPATA31D1Q6ZQQ2 1576 aa25.29■■□□□ 1.64
PHGDH-230ENST00000641927 ZEB1P37275 1124 aaPredicted RBP25.28■■□□□ 1.64
PHGDH-230ENST00000641927 TONSLQ96HA7 1378 aa25.28■■□□□ 1.64
PHGDH-230ENST00000641927 SLC52A1Q9NWF4 448 aa25.26■■□□□ 1.63
PHGDH-230ENST00000641927 TNRQ92752 1358 aa25.25■■□□□ 1.63
PHGDH-230ENST00000641927 CHGAP10645 457 aaKnown RBP25.25■■□□□ 1.63
PHGDH-230ENST00000641927 IDI1Q13907 227 aa25.23■■□□□ 1.63
PHGDH-230ENST00000641927 PTPRMP28827 1452 aa25.23■■□□□ 1.63
PHGDH-230ENST00000641927 RGL3Q3MIN7 710 aa25.23■■□□□ 1.63
PHGDH-230ENST00000641927 PIK3C2BO00750 1634 aa25.22■■□□□ 1.63
PHGDH-230ENST00000641927 KDM4FA0A1W2PPD8 638 aa25.21■■□□□ 1.63
PHGDH-230ENST00000641927 KIF1BO60333 1816 aa25.2■■□□□ 1.62
PHGDH-230ENST00000641927 STAG3Q9UJ98 1225 aa25.19■■□□□ 1.62
PHGDH-230ENST00000641927 TIMELESSQ9UNS1 1208 aa25.19■■□□□ 1.62
PHGDH-230ENST00000641927 L3MBTL2Q969R5 705 aa25.18■■□□□ 1.62
PHGDH-230ENST00000641927 SPATA31E1Q6ZUB1 1445 aa25.16■■□□□ 1.62
PHGDH-230ENST00000641927 ZNF326Q5BKZ1 582 aaKnown RBP25.16■■□□□ 1.62
PHGDH-230ENST00000641927 ADGRB3O60242 1522 aa25.13■■□□□ 1.61
PHGDH-230ENST00000641927 NLRP1Q9C000 1473 aa25.13■■□□□ 1.61
PHGDH-230ENST00000641927 DCAF11Q8TEB1 546 aa25.12■■□□□ 1.61
PHGDH-230ENST00000641927 KDM2AQ9Y2K7 1162 aa25.11■■□□□ 1.61
PHGDH-230ENST00000641927 TMEM131LA2VDJ0 1609 aa25.1■■□□□ 1.61
PHGDH-230ENST00000641927 MYO3AQ8NEV4 1616 aa25.1■■□□□ 1.61
PHGDH-230ENST00000641927 NEURL4Q96JN8 1562 aa25.09■■□□□ 1.61
PHGDH-230ENST00000641927 MYO5BQ9ULV0 1848 aa25.07■■□□□ 1.6
PHGDH-230ENST00000641927 PPP1R15AO75807 674 aaPredicted RBP25.06■■□□□ 1.6
PHGDH-230ENST00000641927 A2ML1A8K2U0 1454 aa25.05■■□□□ 1.6
PHGDH-230ENST00000641927 SETD1BQ9UPS6 1966 aaKnown RBP25.04■■□□□ 1.6
PHGDH-230ENST00000641927 UBR1Q8IWV7 1749 aa25.03■■□□□ 1.6
PHGDH-230ENST00000641927 CEP170BQ9Y4F5 1589 aaPredicted RBP25.02■■□□□ 1.6
PHGDH-230ENST00000641927 RPGRIP1LQ68CZ1 1315 aa25.02■■□□□ 1.6
PHGDH-230ENST00000641927 UHRF1BP1Q6BDS2 1440 aa25.02■■□□□ 1.6
PHGDH-230ENST00000641927 NUTM2DQ5VT03 806 aaPredicted RBP25.01■■□□□ 1.59
PHGDH-230ENST00000641927 KDM5AP29375 1690 aaKnown RBP25■■□□□ 1.59
PHGDH-230ENST00000641927 THEMISQ8N1K5 641 aaPredicted RBP24.99■■□□□ 1.59
PHGDH-230ENST00000641927 NEXMIFQ5QGS0 1516 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms