RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 HSPA2P54652 639 aa26.58■■□□□ 1.85
PHGDH-227ENST00000641811 PTPRKQ15262 1439 aa26.57■■□□□ 1.84
PHGDH-227ENST00000641811 NCOA1Q15788 1441 aa26.57■■□□□ 1.84
PHGDH-227ENST00000641811 EIF2AK4Q9P2K8 1649 aaKnown RBP26.56■■□□□ 1.84
PHGDH-227ENST00000641811 WASHC2CQ9Y4E1 1318 aa26.56■■□□□ 1.84
PHGDH-227ENST00000641811 RNF17Q9BXT8 1623 aaKnown RBP26.55■■□□□ 1.84
PHGDH-227ENST00000641811 ADGRL2O95490 1459 aa26.55■■□□□ 1.84
PHGDH-227ENST00000641811 ITGAEP38570 1179 aa26.54■■□□□ 1.84
PHGDH-227ENST00000641811 KDM5DQ9BY66 1539 aa26.54■■□□□ 1.84
PHGDH-227ENST00000641811 PREX1Q8TCU6 1659 aa26.54■■□□□ 1.84
PHGDH-227ENST00000641811 ERBINQ96RT1 1412 aa26.53■■□□□ 1.84
PHGDH-227ENST00000641811 MROH1Q8NDA8 1641 aa26.51■■□□□ 1.83
PHGDH-227ENST00000641811 UHRF1BP1Q6BDS2 1440 aa26.5■■□□□ 1.83
PHGDH-227ENST00000641811 SETD1BQ9UPS6 1966 aaKnown RBP26.49■■□□□ 1.83
PHGDH-227ENST00000641811 NPATQ14207 1427 aa26.49■■□□□ 1.83
PHGDH-227ENST00000641811 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.49■■□□□ 1.83
PHGDH-227ENST00000641811 FAM135AQ9P2D6 1515 aa26.49■■□□□ 1.83
PHGDH-227ENST00000641811 RRBP1Q9P2E9 1410 aaKnown RBP26.48■■□□□ 1.83
PHGDH-227ENST00000641811 FBXO31Q5XUX0 539 aaPredicted RBP26.47■■□□□ 1.83
PHGDH-227ENST00000641811 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.47■■□□□ 1.835e-16■■□□□ 13.6
PHGDH-227ENST00000641811 ABCC3O15438 1527 aa26.46■■□□□ 1.83
PHGDH-227ENST00000641811 PZPP20742 1482 aa26.42■■□□□ 1.82
PHGDH-227ENST00000641811 ANKRD50Q9ULJ7 1429 aa26.41■■□□□ 1.82
PHGDH-227ENST00000641811 PRDM15P57071 1507 aaPredicted RBP26.41■■□□□ 1.82
PHGDH-227ENST00000641811 CEP152O94986 1710 aa26.41■■□□□ 1.82
PHGDH-227ENST00000641811 ROCK1Q13464 1354 aa26.41■■□□□ 1.82
PHGDH-227ENST00000641811 DEPDC5O75140 1603 aa26.4■■□□□ 1.82
PHGDH-227ENST00000641811 ZC3H13Q5T200 1668 aaKnown RBP26.4■■□□□ 1.82
PHGDH-227ENST00000641811 MYO3AQ8NEV4 1616 aa26.36■■□□□ 1.81
PHGDH-227ENST00000641811 TNRQ92752 1358 aa26.36■■□□□ 1.81
PHGDH-227ENST00000641811 CAMSAP1Q5T5Y3 1602 aa26.36■■□□□ 1.81
PHGDH-227ENST00000641811 KANK1Q14678 1352 aa26.35■■□□□ 1.81
PHGDH-227ENST00000641811 VWDEQ8N2E2 1590 aa26.32■■□□□ 1.8
PHGDH-227ENST00000641811 CEP170BQ9Y4F5 1589 aaPredicted RBP26.31■■□□□ 1.8
PHGDH-227ENST00000641811 ZNF142P52746 1687 aaPredicted RBP26.29■■□□□ 1.8
PHGDH-227ENST00000641811 ERVK-7P63135 1459 aa26.29■■□□□ 1.8
PHGDH-227ENST00000641811 STRCQ7RTU9 1775 aa26.28■■□□□ 1.8
PHGDH-227ENST00000641811 A2ML1A8K2U0 1454 aa26.28■■□□□ 1.8
PHGDH-227ENST00000641811 CFAP65Q6ZU64 1925 aaKnown RBP26.27■■□□□ 1.8
PHGDH-227ENST00000641811 ARHGAP31Q2M1Z3 1444 aa26.27■■□□□ 1.8
PHGDH-227ENST00000641811 LMTK2Q8IWU2 1503 aa26.27■■□□□ 1.8
PHGDH-227ENST00000641811 SPATA31D1Q6ZQQ2 1576 aa26.27■■□□□ 1.8
PHGDH-227ENST00000641811 UNC13BO14795 1591 aa26.23■■□□□ 1.79
PHGDH-227ENST00000641811 NLRP1Q9C000 1473 aa26.22■■□□□ 1.79
PHGDH-227ENST00000641811 NCKAP5LQ9HCH0 1330 aa26.2■■□□□ 1.79
PHGDH-227ENST00000641811 EFCAB6Q5THR3 1501 aa26.2■■□□□ 1.79
PHGDH-227ENST00000641811 NAIPQ13075 1403 aa26.2■■□□□ 1.78
PHGDH-227ENST00000641811 DMRT2Q9Y5R5 561 aa26.17■■□□□ 1.78
PHGDH-227ENST00000641811 NUP155O75694 1391 aa26.17■■□□□ 1.78
PHGDH-227ENST00000641811 PLA2R1Q13018 1463 aa26.16■■□□□ 1.78
PHGDH-227ENST00000641811 UGGT1Q9NYU2 1555 aa26.16■■□□□ 1.78
PHGDH-227ENST00000641811 TET3O43151 1660 aa26.15■■□□□ 1.78
PHGDH-227ENST00000641811 GCC2Q8IWJ2 1684 aa26.13■■□□□ 1.77
PHGDH-227ENST00000641811 THEMISQ8N1K5 641 aaPredicted RBP26.13■■□□□ 1.77
PHGDH-227ENST00000641811 IQGAP3Q86VI3 1631 aa26.13■■□□□ 1.77
PHGDH-227ENST00000641811 HFM1A2PYH4 1435 aa26.13■■□□□ 1.77
PHGDH-227ENST00000641811 PTPRTO14522 1441 aa26.12■■□□□ 1.77
PHGDH-227ENST00000641811 PKD2Q13563 968 aa26.11■■□□□ 1.77
PHGDH-227ENST00000641811 NOS1P29475 1434 aa26.11■■□□□ 1.77
PHGDH-227ENST00000641811 SYNMO15061 1565 aa26.11■■□□□ 1.77
PHGDH-227ENST00000641811 RPRD2Q5VT52 1461 aaKnown RBP26.09■■□□□ 1.77
PHGDH-227ENST00000641811 IDI1Q13907 227 aa26.08■■□□□ 1.77
PHGDH-227ENST00000641811 E9PCH4 1651 aa26.06■■□□□ 1.76
PHGDH-227ENST00000641811 UBR1Q8IWV7 1749 aa26.06■■□□□ 1.76
PHGDH-227ENST00000641811 PIK3C2BO00750 1634 aa26.06■■□□□ 1.76
PHGDH-227ENST00000641811 ANKLE2Q86XL3 938 aa26.04■■□□□ 1.76
PHGDH-227ENST00000641811 TRIM52Q96A61 297 aa26.02■■□□□ 1.76
PHGDH-227ENST00000641811 STAG3Q9UJ98 1225 aa26.02■■□□□ 1.76
PHGDH-227ENST00000641811 NEURL4Q96JN8 1562 aa26.02■■□□□ 1.76
PHGDH-227ENST00000641811 POLR1AO95602 1720 aaPredicted RBP26.01■■□□□ 1.75
PHGDH-227ENST00000641811 SLC52A1Q9NWF4 448 aa26■■□□□ 1.75
PHGDH-227ENST00000641811 LTKP29376 864 aa25.96■■□□□ 1.75
PHGDH-227ENST00000641811 ARHGAP23Q9P227 1491 aa25.96■■□□□ 1.75
PHGDH-227ENST00000641811 NPHP4O75161 1426 aaPredicted RBP25.95■■□□□ 1.74
PHGDH-227ENST00000641811 SLIT1O75093 1534 aa25.94■■□□□ 1.74
PHGDH-227ENST00000641811 ZNF335Q9H4Z2 1342 aaPredicted RBP25.94■■□□□ 1.74
PHGDH-227ENST00000641811 TXNDC2Q86VQ3 553 aa25.94■■□□□ 1.74
PHGDH-227ENST00000641811 CERKQ8TCT0 537 aa25.94■■□□□ 1.74
PHGDH-227ENST00000641811 TMEM2Q9UHN6 1383 aa25.94■■□□□ 1.74
PHGDH-227ENST00000641811 ADGRB3O60242 1522 aa25.93■■□□□ 1.74
PHGDH-227ENST00000641811 MED14O60244 1454 aa25.93■■□□□ 1.74
PHGDH-227ENST00000641811 KDM5AP29375 1690 aaKnown RBP25.92■■□□□ 1.74
PHGDH-227ENST00000641811 SCAF11Q99590 1463 aaKnown RBP25.91■■□□□ 1.74
PHGDH-227ENST00000641811 LTBP4Q8N2S1 1624 aa25.9■■□□□ 1.74
PHGDH-227ENST00000641811 CHGAP10645 457 aaKnown RBP25.9■■□□□ 1.74
PHGDH-227ENST00000641811 ILDR1Q86SU0 546 aaPredicted RBP25.9■■□□□ 1.74
PHGDH-227ENST00000641811 SLC4A1APQ9BWU0 796 aaKnown RBP25.9■■□□□ 1.74
PHGDH-227ENST00000641811 EID1Q9Y6B2 187 aa25.9■■□□□ 1.74
PHGDH-227ENST00000641811 SETD5Q9C0A6 1442 aa25.89■■□□□ 1.74
PHGDH-227ENST00000641811 IQGAP1P46940 1657 aa25.88■■□□□ 1.73
PHGDH-227ENST00000641811 MYO5BQ9ULV0 1848 aa25.87■■□□□ 1.73
PHGDH-227ENST00000641811 SPHKAPQ2M3C7 1700 aa25.87■■□□□ 1.73
PHGDH-227ENST00000641811 TMEM131LA2VDJ0 1609 aa25.87■■□□□ 1.73
PHGDH-227ENST00000641811 FOXD1Q16676 465 aa25.83■■□□□ 1.73
PHGDH-227ENST00000641811 RAB3GAP2Q9H2M9 1393 aa25.82■■□□□ 1.72
PHGDH-227ENST00000641811 FBXO41Q8TF61 875 aa25.82■■□□□ 1.72
PHGDH-227ENST00000641811 SENP3Q9H4L4 574 aaPredicted RBP25.81■■□□□ 1.72
PHGDH-227ENST00000641811 ZFYVE9O95405 1425 aa25.8■■□□□ 1.72
PHGDH-227ENST00000641811 RIMS2Q9UQ26 1411 aa25.8■■□□□ 1.72
PHGDH-227ENST00000641811 MPHOSPH9Q99550 1183 aa25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms