RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 KDM5DQ9BY66 1539 aa12.16□□□□□ -0.46
PHGDH-225ENST00000641720 SPAG9O60271 1321 aaKnown RBP12.16□□□□□ -0.46
PHGDH-225ENST00000641720 MROH1Q8NDA8 1641 aa12.16□□□□□ -0.46
PHGDH-225ENST00000641720 ATP1B4Q9UN42 357 aaPredicted RBP12.16□□□□□ -0.46
PHGDH-225ENST00000641720 UBR1Q8IWV7 1749 aa12.16□□□□□ -0.46
PHGDH-225ENST00000641720 HNRNPMP52272 730 aaKnown RBP eCLIP12.15□□□□□ -0.464e-8■■■□□ 17.4
PHGDH-225ENST00000641720 PPP6R1Q9UPN7 881 aa12.14□□□□□ -0.47
PHGDH-225ENST00000641720 RTEL1-TNFRSF6BF6WH68 1400 aa12.13□□□□□ -0.47
PHGDH-225ENST00000641720 ESF1Q9H501 851 aaKnown RBP12.13□□□□□ -0.47
PHGDH-225ENST00000641720 MYT1LQ9UL68 1186 aa12.13□□□□□ -0.47
PHGDH-225ENST00000641720 CEP152O94986 1710 aa12.13□□□□□ -0.47
PHGDH-225ENST00000641720 LRRC7Q96NW7 1537 aa12.12□□□□□ -0.47
PHGDH-225ENST00000641720 UBTFP17480 764 aaKnown RBP12.12□□□□□ -0.47
PHGDH-225ENST00000641720 UGGT1Q9NYU2 1555 aa12.11□□□□□ -0.47
PHGDH-225ENST00000641720 EHBP1L1Q8N3D4 1523 aa12.11□□□□□ -0.47
PHGDH-225ENST00000641720 ARHGEF5Q12774 1597 aa12.1□□□□□ -0.47
PHGDH-225ENST00000641720 NLRP1Q9C000 1473 aa12.1□□□□□ -0.47
PHGDH-225ENST00000641720 TNRQ92752 1358 aa12.1□□□□□ -0.47
PHGDH-225ENST00000641720 DHX29Q7Z478 1369 aaKnown RBP12.09□□□□□ -0.47
PHGDH-225ENST00000641720 EIF2AK4Q9P2K8 1649 aaKnown RBP12.09□□□□□ -0.47
PHGDH-225ENST00000641720 ZNF644Q9H582 1327 aaPredicted RBP12.09□□□□□ -0.47
PHGDH-225ENST00000641720 SETD1AO15047 1707 aaKnown RBP12.08□□□□□ -0.47
PHGDH-225ENST00000641720 ABCC3O15438 1527 aa12.08□□□□□ -0.48
PHGDH-225ENST00000641720 FBXO31Q5XUX0 539 aaPredicted RBP12.08□□□□□ -0.48
PHGDH-225ENST00000641720 EHMT2Q96KQ7 1210 aa12.08□□□□□ -0.48
PHGDH-225ENST00000641720 NPHP4O75161 1426 aaPredicted RBP12.08□□□□□ -0.48
PHGDH-225ENST00000641720 MAST1Q9Y2H9 1570 aa12.08□□□□□ -0.48
PHGDH-225ENST00000641720 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.07□□□□□ -0.48
PHGDH-225ENST00000641720 GGT6Q6P531 493 aa12.07□□□□□ -0.48
PHGDH-225ENST00000641720 RGS17Q9UGC6 210 aaPredicted RBP12.07□□□□□ -0.48
PHGDH-225ENST00000641720 ZNF777Q9ULD5 760 aaPredicted RBP12.07□□□□□ -0.48
PHGDH-225ENST00000641720 CEP162Q5TB80 1403 aa12.06□□□□□ -0.48
PHGDH-225ENST00000641720 MIA2Q96PC5 1412 aa12.06□□□□□ -0.48
PHGDH-225ENST00000641720 CAMSAP2Q08AD1 1489 aa12.06□□□□□ -0.48
PHGDH-225ENST00000641720 NCOA2Q15596 1464 aa12.06□□□□□ -0.48
PHGDH-225ENST00000641720 CCDC141Q6ZP82 1450 aa12.06□□□□□ -0.48
PHGDH-225ENST00000641720 CCNB3Q8WWL7 1395 aa12.05□□□□□ -0.48
PHGDH-225ENST00000641720 ARHGAP23Q9P227 1491 aa12.05□□□□□ -0.48
PHGDH-225ENST00000641720 KDM5AP29375 1690 aaKnown RBP12.04□□□□□ -0.48
PHGDH-225ENST00000641720 ERVK-7P63135 1459 aa12.04□□□□□ -0.48
PHGDH-225ENST00000641720 TOM1O60784 492 aa12.04□□□□□ -0.48
PHGDH-225ENST00000641720 PIP4K2BP78356 416 aa12.04□□□□□ -0.48
PHGDH-225ENST00000641720 SLIT1O75093 1534 aa12.04□□□□□ -0.48
PHGDH-225ENST00000641720 CFDP1Q9UEE9 299 aaPredicted RBP12.03□□□□□ -0.48
PHGDH-225ENST00000641720 CROCC2H7BZ55 1655 aa12.02□□□□□ -0.49
PHGDH-225ENST00000641720 MAP3K1Q13233 1512 aa12.01□□□□□ -0.49
PHGDH-225ENST00000641720 PIK3C2BO00750 1634 aa12.01□□□□□ -0.49
PHGDH-225ENST00000641720 ROBO1Q9Y6N7 1651 aa12.01□□□□□ -0.49
PHGDH-225ENST00000641720 MYO5BQ9ULV0 1848 aa12□□□□□ -0.49
PHGDH-225ENST00000641720 PRDM15P57071 1507 aaPredicted RBP11.99□□□□□ -0.49
PHGDH-225ENST00000641720 NWD1Q149M9 1564 aa11.99□□□□□ -0.49
PHGDH-225ENST00000641720 SCAF11Q99590 1463 aaKnown RBP11.98□□□□□ -0.49
PHGDH-225ENST00000641720 MTUS2Q5JR59 1369 aa11.98□□□□□ -0.49
PHGDH-225ENST00000641720 ANKLE2Q86XL3 938 aa11.98□□□□□ -0.49
PHGDH-225ENST00000641720 TET3O43151 1660 aa11.97□□□□□ -0.49
PHGDH-225ENST00000641720 SCAF1Q9H7N4 1312 aaKnown RBP11.97□□□□□ -0.49
PHGDH-225ENST00000641720 KIF3BO15066 747 aa11.97□□□□□ -0.49
PHGDH-225ENST00000641720 CHD2O14647 1828 aaKnown RBP11.96□□□□□ -0.49
PHGDH-225ENST00000641720 THEMISQ8N1K5 641 aaPredicted RBP11.95□□□□□ -0.5
PHGDH-225ENST00000641720 COL16A1Q07092 1604 aaPredicted RBP11.94□□□□□ -0.5
PHGDH-225ENST00000641720 LOC105371045A0A1W2PR82 267 aa11.94□□□□□ -0.5
PHGDH-225ENST00000641720 FAM135BQ49AJ0 1406 aa11.94□□□□□ -0.5
PHGDH-225ENST00000641720 SRCAPQ6ZRS2 3230 aa11.93□□□□□ -0.5
PHGDH-225ENST00000641720 PHLPP1O60346 1717 aa11.93□□□□□ -0.5
PHGDH-225ENST00000641720 ARHGAP31Q2M1Z3 1444 aa11.93□□□□□ -0.5
PHGDH-225ENST00000641720 WASHC2CQ9Y4E1 1318 aa11.92□□□□□ -0.5
PHGDH-225ENST00000641720 POTEAQ6S8J7 498 aa11.92□□□□□ -0.5
PHGDH-225ENST00000641720 LTKP29376 864 aa11.91□□□□□ -0.5
PHGDH-225ENST00000641720 PHF23Q9BUL5 403 aaPredicted RBP11.91□□□□□ -0.5
PHGDH-225ENST00000641720 DUOX2Q9NRD8 1548 aa11.9□□□□□ -0.5
PHGDH-225ENST00000641720 SHPRHQ149N8 1683 aa11.89□□□□□ -0.51
PHGDH-225ENST00000641720 LMTK2Q8IWU2 1503 aa11.88□□□□□ -0.51
PHGDH-225ENST00000641720 LRP6O75581 1613 aa11.87□□□□□ -0.51
PHGDH-225ENST00000641720 NKTRP30414 1462 aaKnown RBP11.87□□□□□ -0.51
PHGDH-225ENST00000641720 GCC2Q8IWJ2 1684 aa11.87□□□□□ -0.51
PHGDH-225ENST00000641720 ADGRB3O60242 1522 aa11.86□□□□□ -0.51
PHGDH-225ENST00000641720 EFCAB6Q5THR3 1501 aa11.86□□□□□ -0.51
PHGDH-225ENST00000641720 RSPH4AQ5TD94 716 aa11.86□□□□□ -0.51
PHGDH-225ENST00000641720 LRRC9Q6ZRR7 1453 aa11.86□□□□□ -0.51
PHGDH-225ENST00000641720 DIP2AQ14689 1571 aa11.86□□□□□ -0.51
PHGDH-225ENST00000641720 TMEM2Q9UHN6 1383 aa11.85□□□□□ -0.51
PHGDH-225ENST00000641720 TMEM94Q12767 1356 aa11.84□□□□□ -0.51
PHGDH-225ENST00000641720 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.84□□□□□ -0.51
PHGDH-225ENST00000641720 SENP3Q9H4L4 574 aaPredicted RBP11.84□□□□□ -0.51
PHGDH-225ENST00000641720 AHDC1Q5TGY3 1603 aaPredicted RBP11.84□□□□□ -0.51
PHGDH-225ENST00000641720 NOS1P29475 1434 aa11.83□□□□□ -0.52
PHGDH-225ENST00000641720 ERBINQ96RT1 1412 aa11.83□□□□□ -0.52
PHGDH-225ENST00000641720 TMEM131LA2VDJ0 1609 aa11.82□□□□□ -0.52
PHGDH-225ENST00000641720 ZFYVE9O95405 1425 aa11.81□□□□□ -0.52
PHGDH-225ENST00000641720 PTPN23Q9H3S7 1636 aa11.81□□□□□ -0.52
PHGDH-225ENST00000641720 EP400Q96L91 3159 aa11.8□□□□□ -0.52
PHGDH-225ENST00000641720 MYOM3Q5VTT5 1437 aa11.8□□□□□ -0.52
PHGDH-225ENST00000641720 NHSL1Q5SYE7 1610 aa11.8□□□□□ -0.52
PHGDH-225ENST00000641720 ABCC5O15440 1437 aa11.79□□□□□ -0.52
PHGDH-225ENST00000641720 TXNDC2Q86VQ3 553 aa11.79□□□□□ -0.52
PHGDH-225ENST00000641720 KCNA6P17658 529 aa11.77□□□□□ -0.53
PHGDH-225ENST00000641720 NRXN3Q9Y4C0 1643 aa11.77□□□□□ -0.53
PHGDH-225ENST00000641720 XRN1Q8IZH2 1706 aaKnown RBP11.76□□□□□ -0.53
PHGDH-225ENST00000641720 KIF15Q9NS87 1388 aa11.76□□□□□ -0.53
PHGDH-225ENST00000641720 FGD6Q6ZV73 1430 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms