RNA–Protein interactions for RNA: ENST00000641476.1

SRRT-219, Transcript of serrate, RNA effector molecule, humanhuman

Gene SRRT, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-219ENST00000641476 ZNF644Q9H582 1327 aaPredicted RBP23.33■■□□□ 1.32
SRRT-219ENST00000641476 LOC105371045A0A1W2PR82 267 aa23.32■■□□□ 1.32
SRRT-219ENST00000641476 A2ML1A8K2U0 1454 aa23.29■■□□□ 1.32
SRRT-219ENST00000641476 CCDC141Q6ZP82 1450 aa23.29■■□□□ 1.32
SRRT-219ENST00000641476 LRRC9Q6ZRR7 1453 aa23.29■■□□□ 1.32
SRRT-219ENST00000641476 MED1Q15648 1581 aaPredicted RBP23.28■■□□□ 1.32
SRRT-219ENST00000641476 RTEL1-TNFRSF6BF6WH68 1400 aa23.25■■□□□ 1.31
SRRT-219ENST00000641476 MAP3K1Q13233 1512 aa23.25■■□□□ 1.31
SRRT-219ENST00000641476 TOM1O60784 492 aa23.25■■□□□ 1.31
SRRT-219ENST00000641476 DNMT1P26358 1616 aaKnown RBP23.25■■□□□ 1.31
SRRT-219ENST00000641476 ARHGEF5Q12774 1597 aa23.24■■□□□ 1.31
SRRT-219ENST00000641476 CPS1P31327 1500 aa23.23■■□□□ 1.31
SRRT-219ENST00000641476 SHANK2Q9UPX8 1470 aa23.2■■□□□ 1.3
SRRT-219ENST00000641476 TNRQ92752 1358 aa23.2■■□□□ 1.3
SRRT-219ENST00000641476 FBXO31Q5XUX0 539 aaPredicted RBP23.2■■□□□ 1.3
SRRT-219ENST00000641476 NEURL4Q96JN8 1562 aa23.19■■□□□ 1.3
SRRT-219ENST00000641476 PHF23Q9BUL5 403 aaPredicted RBP23.18■■□□□ 1.3
SRRT-219ENST00000641476 DHX29Q7Z478 1369 aaKnown RBP23.15■■□□□ 1.3
SRRT-219ENST00000641476 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.15■■□□□ 1.3
SRRT-219ENST00000641476 POLR1AO95602 1720 aaPredicted RBP23.15■■□□□ 1.3
SRRT-219ENST00000641476 FAM135AQ9P2D6 1515 aa23.14■■□□□ 1.3
SRRT-219ENST00000641476 ANKLE2Q86XL3 938 aa23.14■■□□□ 1.29
SRRT-219ENST00000641476 MAST1Q9Y2H9 1570 aa23.14■■□□□ 1.29
SRRT-219ENST00000641476 PZPP20742 1482 aa23.13■■□□□ 1.29
SRRT-219ENST00000641476 KIF3BO15066 747 aa23.13■■□□□ 1.29
SRRT-219ENST00000641476 MYOM3Q5VTT5 1437 aa23.13■■□□□ 1.29
SRRT-219ENST00000641476 KDM5DQ9BY66 1539 aa23.13■■□□□ 1.29
SRRT-219ENST00000641476 KANK4Q5T7N3 995 aaPredicted RBP23.12■■□□□ 1.29
SRRT-219ENST00000641476 SENP3Q9H4L4 574 aaPredicted RBP23.12■■□□□ 1.29
SRRT-219ENST00000641476 VWDEQ8N2E2 1590 aa23.11■■□□□ 1.29
SRRT-219ENST00000641476 WASHC2CQ9Y4E1 1318 aa23.1■■□□□ 1.29
SRRT-219ENST00000641476 RSPH4AQ5TD94 716 aa23.1■■□□□ 1.29
SRRT-219ENST00000641476 MIA2Q96PC5 1412 aa23.09■■□□□ 1.29
SRRT-219ENST00000641476 THEMISQ8N1K5 641 aaPredicted RBP23.09■■□□□ 1.29
SRRT-219ENST00000641476 NPHP4O75161 1426 aaPredicted RBP23.08■■□□□ 1.29
SRRT-219ENST00000641476 RNF17Q9BXT8 1623 aaKnown RBP23.08■■□□□ 1.28
SRRT-219ENST00000641476 CROCC2H7BZ55 1655 aa23.06■■□□□ 1.28
SRRT-219ENST00000641476 ALKQ9UM73 1620 aa23.06■■□□□ 1.28
SRRT-219ENST00000641476 UGGT1Q9NYU2 1555 aa23.06■■□□□ 1.28
SRRT-219ENST00000641476 NLRP1Q9C000 1473 aa23.05■■□□□ 1.28
SRRT-219ENST00000641476 EIF2AK4Q9P2K8 1649 aaKnown RBP23.05■■□□□ 1.28
SRRT-219ENST00000641476 MED14O60244 1454 aa23.04■■□□□ 1.28
SRRT-219ENST00000641476 PTPN23Q9H3S7 1636 aa23.03■■□□□ 1.28
SRRT-219ENST00000641476 TSPY4P0CV99 314 aa23.02■■□□□ 1.28
SRRT-219ENST00000641476 TSPY10P0CW01 314 aa23.02■■□□□ 1.28
SRRT-219ENST00000641476 ZC3H13Q5T200 1668 aaKnown RBP23.02■■□□□ 1.28
SRRT-219ENST00000641476 DEPDC5O75140 1603 aa23■■□□□ 1.27
SRRT-219ENST00000641476 MROH1Q8NDA8 1641 aa23■■□□□ 1.27
SRRT-219ENST00000641476 LRRC7Q96NW7 1537 aa22.98■■□□□ 1.27
SRRT-219ENST00000641476 IQGAP1P46940 1657 aa22.98■■□□□ 1.27
SRRT-219ENST00000641476 ABCC3O15438 1527 aa22.98■■□□□ 1.27
SRRT-219ENST00000641476 APLP2Q06481 763 aa22.95■■□□□ 1.26
SRRT-219ENST00000641476 DUOX2Q9NRD8 1548 aa22.95■■□□□ 1.26
SRRT-219ENST00000641476 CEP152O94986 1710 aa22.94■■□□□ 1.26
SRRT-219ENST00000641476 FGD6Q6ZV73 1430 aa22.94■■□□□ 1.26
SRRT-219ENST00000641476 SYNMO15061 1565 aa22.93■■□□□ 1.26
SRRT-219ENST00000641476 ABCC5O15440 1437 aa22.92■■□□□ 1.26
SRRT-219ENST00000641476 STRCP1A6NGW2 1772 aa22.91■■□□□ 1.26
SRRT-219ENST00000641476 PRDM15P57071 1507 aaPredicted RBP22.91■■□□□ 1.26
SRRT-219ENST00000641476 DAPK1P53355 1430 aa22.91■■□□□ 1.26
SRRT-219ENST00000641476 KIF15Q9NS87 1388 aa22.89■■□□□ 1.26
SRRT-219ENST00000641476 RGS17Q9UGC6 210 aaPredicted RBP22.89■■□□□ 1.25
SRRT-219ENST00000641476 ERVK-7P63135 1459 aa22.88■■□□□ 1.25
SRRT-219ENST00000641476 ERBINQ96RT1 1412 aa22.88■■□□□ 1.25
SRRT-219ENST00000641476 SCAF11Q99590 1463 aaKnown RBP22.84■■□□□ 1.25
SRRT-219ENST00000641476 LTKP29376 864 aa22.8■■□□□ 1.24
SRRT-219ENST00000641476 TXNDC2Q86VQ3 553 aa22.8■■□□□ 1.24
SRRT-219ENST00000641476 UBR1Q8IWV7 1749 aa22.78■■□□□ 1.24
SRRT-219ENST00000641476 RRP7BPQ9NSQ0 103 aa22.77■■□□□ 1.24
SRRT-219ENST00000641476 ADGRL2O95490 1459 aa22.77■■□□□ 1.24
SRRT-219ENST00000641476 ANKRD30AQ9BXX3 1397 aa22.76■■□□□ 1.23
SRRT-219ENST00000641476 ARHGAP23Q9P227 1491 aa22.75■■□□□ 1.23
SRRT-219ENST00000641476 CFAP65Q6ZU64 1925 aaKnown RBP22.74■■□□□ 1.23
SRRT-219ENST00000641476 ARHGAP31Q2M1Z3 1444 aa22.74■■□□□ 1.23
SRRT-219ENST00000641476 SLIT1O75093 1534 aa22.74■■□□□ 1.23
SRRT-219ENST00000641476 POTEAQ6S8J7 498 aa22.74■■□□□ 1.23
SRRT-219ENST00000641476 EID1Q9Y6B2 187 aa22.74■■□□□ 1.23
SRRT-219ENST00000641476 FAM135BQ49AJ0 1406 aa22.73■■□□□ 1.23
SRRT-219ENST00000641476 LMTK2Q8IWU2 1503 aa22.72■■□□□ 1.23
SRRT-219ENST00000641476 CHIC2Q9UKJ5 165 aa22.7■■□□□ 1.22
SRRT-219ENST00000641476 TMEM94Q12767 1356 aa22.7■■□□□ 1.22
SRRT-219ENST00000641476 XIRP1Q702N8 1843 aaKnown RBP22.68■■□□□ 1.22
SRRT-219ENST00000641476 EFCAB6Q5THR3 1501 aa22.68■■□□□ 1.22
SRRT-219ENST00000641476 KANK1Q14678 1352 aa22.68■■□□□ 1.22
SRRT-219ENST00000641476 STAG3Q9UJ98 1225 aa22.68■■□□□ 1.22
SRRT-219ENST00000641476 PIK3C2BO00750 1634 aa22.68■■□□□ 1.22
SRRT-219ENST00000641476 TMEM2Q9UHN6 1383 aa22.67■■□□□ 1.22
SRRT-219ENST00000641476 FAM50AQ14320 339 aaKnown RBP22.66■■□□□ 1.22
SRRT-219ENST00000641476 RBM33Q96EV2 1170 aaKnown RBP22.66■■□□□ 1.22
SRRT-219ENST00000641476 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.66■■□□□ 1.223e-9■■■■□ 20
SRRT-219ENST00000641476 KDM5AP29375 1690 aaKnown RBP22.62■■□□□ 1.21
SRRT-219ENST00000641476 ROBO1Q9Y6N7 1651 aa22.62■■□□□ 1.21
SRRT-219ENST00000641476 KCNA6P17658 529 aa22.62■■□□□ 1.21
SRRT-219ENST00000641476 PROSER2Q86WR7 435 aaPredicted RBP22.62■■□□□ 1.21
SRRT-219ENST00000641476 SLC26A8Q96RN1 970 aa22.62■■□□□ 1.21
SRRT-219ENST00000641476 ANKRD50Q9ULJ7 1429 aa22.61■■□□□ 1.21
SRRT-219ENST00000641476 UNC13BO14795 1591 aa22.6■■□□□ 1.21
SRRT-219ENST00000641476 TET3O43151 1660 aa22.58■■□□□ 1.21
SRRT-219ENST00000641476 NOS1P29475 1434 aa22.57■■□□□ 1.2
SRRT-219ENST00000641476 ADGRB3O60242 1522 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms