RNA–Protein interactions for RNA: ENST00000640657.1

HNRNPU-230, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 4,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-230ENST00000640657 NCOA2Q15596 1464 aa6.32□□□□□ -1.4
HNRNPU-230ENST00000640657 CADPSQ9ULU8 1353 aa6.32□□□□□ -1.4
HNRNPU-230ENST00000640657 NAIPQ13075 1403 aa6.32□□□□□ -1.4
HNRNPU-230ENST00000640657 IPO8O15397 1037 aaKnown RBP6.32□□□□□ -1.4
HNRNPU-230ENST00000640657 SLC4A3P48751 1232 aa6.32□□□□□ -1.4
HNRNPU-230ENST00000640657 CENPJQ9HC77 1338 aaPredicted RBP6.32□□□□□ -1.4
HNRNPU-230ENST00000640657 EHBP1L1Q8N3D4 1523 aa6.32□□□□□ -1.4
HNRNPU-230ENST00000640657 FRAT2O75474 233 aaPredicted RBP6.32□□□□□ -1.4
HNRNPU-230ENST00000640657 RSPH4AQ5TD94 716 aa6.32□□□□□ -1.4
HNRNPU-230ENST00000640657 SYAP1Q96A49 352 aaPredicted RBP6.32□□□□□ -1.4
HNRNPU-230ENST00000640657 KIAA2012Q0VF49 1180 aa6.31□□□□□ -1.4
HNRNPU-230ENST00000640657 FOXD1Q16676 465 aa6.31□□□□□ -1.4
HNRNPU-230ENST00000640657 GZF1Q9H116 711 aaPredicted RBP6.31□□□□□ -1.4
HNRNPU-230ENST00000640657 ROCK1Q13464 1354 aa6.31□□□□□ -1.4
HNRNPU-230ENST00000640657 CALD1Q05682 793 aaKnown RBP6.31□□□□□ -1.4
HNRNPU-230ENST00000640657 STAC3Q96MF2 364 aa6.31□□□□□ -1.4
HNRNPU-230ENST00000640657 NUP155O75694 1391 aa6.3□□□□□ -1.4
HNRNPU-230ENST00000640657 ST20-MTHFSA0A0A6YYL1 179 aa6.3□□□□□ -1.4
HNRNPU-230ENST00000640657 PDE3AQ14432 1141 aa6.3□□□□□ -1.4
HNRNPU-230ENST00000640657 CCDC184Q52MB2 194 aa6.3□□□□□ -1.4
HNRNPU-230ENST00000640657 SENP3-EIF4A1A0A087X0R7 540 aa6.3□□□□□ -1.4
HNRNPU-230ENST00000640657 NCAPD3P42695 1498 aa6.3□□□□□ -1.4
HNRNPU-230ENST00000640657 CCDC173Q0VFZ6 552 aa6.29□□□□□ -1.4
HNRNPU-230ENST00000640657 PLIN1O60240 522 aa6.29□□□□□ -1.4
HNRNPU-230ENST00000640657 CDK11BP21127 795 aaKnown RBP6.29□□□□□ -1.4
HNRNPU-230ENST00000640657 CIZ1Q9ULV3 898 aaPredicted RBP6.29□□□□□ -1.4
HNRNPU-230ENST00000640657 RGL3Q3MIN7 710 aa6.29□□□□□ -1.4
HNRNPU-230ENST00000640657 TRAK2O60296 914 aa6.29□□□□□ -1.4
HNRNPU-230ENST00000640657 PHF14O94880 888 aa6.28□□□□□ -1.4
HNRNPU-230ENST00000640657 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.28□□□□□ -1.43e-6■■□□□ 11.8
HNRNPU-230ENST00000640657 INSRP06213 1382 aa6.28□□□□□ -1.4
HNRNPU-230ENST00000640657 CFTRP13569 1480 aa6.28□□□□□ -1.4
HNRNPU-230ENST00000640657 CLCN1P35523 988 aa6.28□□□□□ -1.4
HNRNPU-230ENST00000640657 PDCL3Q9H2J4 239 aa6.28□□□□□ -1.4
HNRNPU-230ENST00000640657 HAP1P54257 671 aaPredicted RBP6.28□□□□□ -1.4
HNRNPU-230ENST00000640657 SENP3Q9H4L4 574 aaPredicted RBP6.28□□□□□ -1.4
HNRNPU-230ENST00000640657 PTPN23Q9H3S7 1636 aa6.28□□□□□ -1.4
HNRNPU-230ENST00000640657 CLUAP1Q96AJ1 413 aa6.27□□□□□ -1.41
HNRNPU-230ENST00000640657 ESPNB1AK53 854 aa6.27□□□□□ -1.41
HNRNPU-230ENST00000640657 MFAP1P55081 439 aaKnown RBP6.27□□□□□ -1.41
HNRNPU-230ENST00000640657 NBPF8Q3BBV2 869 aa6.27□□□□□ -1.41
HNRNPU-230ENST00000640657 PANK3Q9H999 370 aa6.27□□□□□ -1.41
HNRNPU-230ENST00000640657 KIAA1107Q9UPP5 1409 aa6.27□□□□□ -1.41
HNRNPU-230ENST00000640657 SUPT6HQ7KZ85 1726 aaKnown RBP6.27□□□□□ -1.41
HNRNPU-230ENST00000640657 ANKRD30BQ9BXX2 1392 aa6.27□□□□□ -1.41
HNRNPU-230ENST00000640657 MCCP23508 829 aa6.27□□□□□ -1.41
HNRNPU-230ENST00000640657 MCM4P33991 863 aa6.27□□□□□ -1.41
HNRNPU-230ENST00000640657 NUCB2P80303 420 aa6.26□□□□□ -1.41
HNRNPU-230ENST00000640657 SPRYD3Q8NCJ5 442 aa6.26□□□□□ -1.41
HNRNPU-230ENST00000640657 KIF21AQ7Z4S6 1674 aa6.26□□□□□ -1.41
HNRNPU-230ENST00000640657 C22orf23Q9BZE7 217 aa6.26□□□□□ -1.41
HNRNPU-230ENST00000640657 GRPEL1Q9HAV7 217 aa6.26□□□□□ -1.41
HNRNPU-230ENST00000640657 RPRD2Q5VT52 1461 aaKnown RBP6.26□□□□□ -1.41
HNRNPU-230ENST00000640657 GOLGA6L6A8MZA4 724 aa6.25□□□□□ -1.41
HNRNPU-230ENST00000640657 MORC1Q86VD1 984 aa6.25□□□□□ -1.41
HNRNPU-230ENST00000640657 DDX49Q9Y6V7 483 aaKnown RBP6.25□□□□□ -1.41
HNRNPU-230ENST00000640657 CCDC39Q9UFE4 941 aa6.25□□□□□ -1.41
HNRNPU-230ENST00000640657 ZKSCAN2Q63HK3 967 aa6.25□□□□□ -1.41
HNRNPU-230ENST00000640657 CCDC144AA2RUR9 1427 aa6.25□□□□□ -1.41
HNRNPU-230ENST00000640657 PCF11O94913 1555 aaKnown RBP6.24□□□□□ -1.41
HNRNPU-230ENST00000640657 NRDCO43847 1150 aa6.24□□□□□ -1.41
HNRNPU-230ENST00000640657 NASPP49321 788 aaPredicted RBP6.24□□□□□ -1.41
HNRNPU-230ENST00000640657 HMGN5P82970 282 aaKnown RBP6.24□□□□□ -1.41
HNRNPU-230ENST00000640657 ST18O60284 1047 aa6.24□□□□□ -1.41
HNRNPU-230ENST00000640657 DDX19BQ9UMR2 479 aa6.24□□□□□ -1.41
HNRNPU-230ENST00000640657 THOC2Q8NI27 1593 aaKnown RBP6.23□□□□□ -1.41
HNRNPU-230ENST00000640657 TPM3P06753 285 aa6.23□□□□□ -1.41
HNRNPU-230ENST00000640657 CT47B1P0C2W7 299 aaPredicted RBP6.23□□□□□ -1.41
HNRNPU-230ENST00000640657 ZSCAN30Q86W11 494 aa6.23□□□□□ -1.41
HNRNPU-230ENST00000640657 CDCA7LQ96GN5 454 aa6.23□□□□□ -1.41
HNRNPU-230ENST00000640657 MCM5P33992 734 aa6.23□□□□□ -1.41
HNRNPU-230ENST00000640657 NEUROD2Q15784 382 aa6.23□□□□□ -1.41
HNRNPU-230ENST00000640657 CARMIL2Q6F5E8 1435 aa6.22□□□□□ -1.41
HNRNPU-230ENST00000640657 SCAPERQ9BY12 1400 aa6.22□□□□□ -1.41
HNRNPU-230ENST00000640657 TAF3Q5VWG9 929 aa6.22□□□□□ -1.41
HNRNPU-230ENST00000640657 COG6Q9Y2V7 657 aa6.22□□□□□ -1.41
HNRNPU-230ENST00000640657 CFAP43Q8NDM7 1665 aa6.22□□□□□ -1.41
HNRNPU-230ENST00000640657 FBLN2P98095 1184 aa6.22□□□□□ -1.41
HNRNPU-230ENST00000640657 ITPRIPQ8IWB1 547 aa6.22□□□□□ -1.41
HNRNPU-230ENST00000640657 CHMP7Q8WUX9 453 aaPredicted RBP6.22□□□□□ -1.41
HNRNPU-230ENST00000640657 ZMYND15Q9H091 742 aa6.22□□□□□ -1.41
HNRNPU-230ENST00000640657 KIF16BQ96L93 1317 aa6.22□□□□□ -1.41
HNRNPU-230ENST00000640657 TERF1P54274 439 aa6.22□□□□□ -1.41
HNRNPU-230ENST00000640657 FAM13BQ9NYF5 915 aa6.22□□□□□ -1.41
HNRNPU-230ENST00000640657 POGKQ9P215 609 aa6.22□□□□□ -1.41
HNRNPU-230ENST00000640657 ADAMTS8Q9UP79 889 aa6.21□□□□□ -1.41
HNRNPU-230ENST00000640657 KANK1Q14678 1352 aa6.21□□□□□ -1.41
HNRNPU-230ENST00000640657 HECW1Q76N89 1606 aa6.21□□□□□ -1.41
HNRNPU-230ENST00000640657 DAPK1P53355 1430 aa6.21□□□□□ -1.42
HNRNPU-230ENST00000640657 PDS5BQ9NTI5 1447 aa6.21□□□□□ -1.42
HNRNPU-230ENST00000640657 SLFN5Q08AF3 891 aa6.21□□□□□ -1.42
HNRNPU-230ENST00000640657 SMC4Q9NTJ3 1288 aa6.21□□□□□ -1.42
HNRNPU-230ENST00000640657 PODXL2Q9NZ53 605 aa6.21□□□□□ -1.42
HNRNPU-230ENST00000640657 LRPPRCP42704 1394 aaKnown RBP6.21□□□□□ -1.42
HNRNPU-230ENST00000640657 FANCD2Q9BXW9 1451 aa6.21□□□□□ -1.42
HNRNPU-230ENST00000640657 ANKRD50Q9ULJ7 1429 aa6.21□□□□□ -1.42
HNRNPU-230ENST00000640657 APAF1O14727 1248 aa6.21□□□□□ -1.42
HNRNPU-230ENST00000640657 KIAA1211Q6ZU35 1233 aa6.21□□□□□ -1.42
HNRNPU-230ENST00000640657 DZIP1LQ8IYY4 767 aaKnown RBP6.21□□□□□ -1.42
HNRNPU-230ENST00000640657 DIAPH3Q9NSV4 1193 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms