RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 CENPJQ9HC77 1338 aaPredicted RBP22.36■■□□□ 1.17
SCARB2-223ENST00000640640 SMC4Q9NTJ3 1288 aa22.36■■□□□ 1.17
SCARB2-223ENST00000640640 HFM1A2PYH4 1435 aa22.36■■□□□ 1.17
SCARB2-223ENST00000640640 EHBP1L1Q8N3D4 1523 aa22.35■■□□□ 1.17
SCARB2-223ENST00000640640 SYNJ2O15056 1496 aa22.35■■□□□ 1.17
SCARB2-223ENST00000640640 PRG4Q92954 1404 aaPredicted RBP22.35■■□□□ 1.17
SCARB2-223ENST00000640640 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.35■■□□□ 1.17
SCARB2-223ENST00000640640 AFAP1Q8N556 730 aa22.35■■□□□ 1.17
SCARB2-223ENST00000640640 EID1Q9Y6B2 187 aa22.35■■□□□ 1.17
SCARB2-223ENST00000640640 HSP90AB1P08238 724 aaKnown RBP22.35■■□□□ 1.17
SCARB2-223ENST00000640640 ABCA10Q8WWZ4 1543 aa22.34■■□□□ 1.17
SCARB2-223ENST00000640640 STAC3Q96MF2 364 aa22.34■■□□□ 1.17
SCARB2-223ENST00000640640 EVC2Q86UK5 1308 aa22.33■■□□□ 1.17
SCARB2-223ENST00000640640 TRIM44Q96DX7 344 aaPredicted RBP22.33■■□□□ 1.17
SCARB2-223ENST00000640640 RRP7AQ9Y3A4 280 aaKnown RBP22.33■■□□□ 1.17
SCARB2-223ENST00000640640 CNTLNQ9NXG0 1405 aa22.32■■□□□ 1.16
SCARB2-223ENST00000640640 CGNL1Q0VF96 1302 aa22.32■■□□□ 1.16
SCARB2-223ENST00000640640 TROQ12816 1431 aaPredicted RBP22.32■■□□□ 1.16
SCARB2-223ENST00000640640 NUTM2FA1L443 756 aa22.31■■□□□ 1.16
SCARB2-223ENST00000640640 PEG3Q9GZU2 1588 aa22.3■■□□□ 1.16
SCARB2-223ENST00000640640 HSCBQ8IWL3 235 aa22.3■■□□□ 1.16
SCARB2-223ENST00000640640 PMFBP1Q8TBY8 1022 aa22.3■■□□□ 1.16
SCARB2-223ENST00000640640 NGDNQ8NEJ9 315 aaKnown RBP22.29■■□□□ 1.16
SCARB2-223ENST00000640640 APBB1O00213 710 aa22.29■■□□□ 1.16
SCARB2-223ENST00000640640 SNAPC4Q5SXM2 1469 aa22.28■■□□□ 1.16
SCARB2-223ENST00000640640 APAF1O14727 1248 aa22.28■■□□□ 1.16
SCARB2-223ENST00000640640 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.28■■□□□ 1.16
SCARB2-223ENST00000640640 MINK1Q8N4C8 1332 aaPredicted RBP22.27■■□□□ 1.16
SCARB2-223ENST00000640640 ARHGAP5Q13017 1502 aa22.27■■□□□ 1.16
SCARB2-223ENST00000640640 PLIN1O60240 522 aa22.27■■□□□ 1.16
SCARB2-223ENST00000640640 RRP1P56182 461 aaKnown RBP22.26■■□□□ 1.15
SCARB2-223ENST00000640640 DNAJC5BQ9UF47 199 aa22.26■■□□□ 1.15
SCARB2-223ENST00000640640 NBPF8Q3BBV2 869 aa22.25■■□□□ 1.15
SCARB2-223ENST00000640640 KCNJ4P48050 445 aa22.24■■□□□ 1.15
SCARB2-223ENST00000640640 E9PSI1 815 aa22.24■■□□□ 1.15
SCARB2-223ENST00000640640 EXOC6Q8TAG9 804 aa22.24■■□□□ 1.15
SCARB2-223ENST00000640640 C9orf84Q5VXU9 1444 aa22.23■■□□□ 1.15
SCARB2-223ENST00000640640 LMOD3Q0VAK6 560 aa22.23■■□□□ 1.15
SCARB2-223ENST00000640640 CFAP44Q96MT7 982 aa22.23■■□□□ 1.15
SCARB2-223ENST00000640640 HECW1Q76N89 1606 aa22.23■■□□□ 1.15
SCARB2-223ENST00000640640 KIAA0586Q9BVV6 1533 aa22.22■■□□□ 1.15
SCARB2-223ENST00000640640 SPRYD3Q8NCJ5 442 aa22.22■■□□□ 1.15
SCARB2-223ENST00000640640 TPRNQ4KMQ1 711 aa22.21■■□□□ 1.15
SCARB2-223ENST00000640640 STK31Q9BXU1 1019 aa22.21■■□□□ 1.15
SCARB2-223ENST00000640640 KIAA1107Q9UPP5 1409 aa22.21■■□□□ 1.15
SCARB2-223ENST00000640640 BCL2L13Q9BXK5 485 aa22.21■■□□□ 1.15
SCARB2-223ENST00000640640 EPRSP07814 1512 aaKnown RBP22.2■■□□□ 1.14
SCARB2-223ENST00000640640 NAIPQ13075 1403 aa22.2■■□□□ 1.14
SCARB2-223ENST00000640640 AMPHP49418 695 aa22.2■■□□□ 1.14
SCARB2-223ENST00000640640 IPO9Q96P70 1041 aaKnown RBP22.19■■□□□ 1.14
SCARB2-223ENST00000640640 LAMC3Q9Y6N6 1575 aa22.18■■□□□ 1.14
SCARB2-223ENST00000640640 FAM69CQ0P6D2 419 aa22.18■■□□□ 1.14
SCARB2-223ENST00000640640 DAPK1P53355 1430 aa22.18■■□□□ 1.14
SCARB2-223ENST00000640640 NBPF1Q3BBV0 1214 aa22.18■■□□□ 1.14
SCARB2-223ENST00000640640 FGD1P98174 961 aa22.17■■□□□ 1.14
SCARB2-223ENST00000640640 CDK13Q14004 1512 aaKnown RBP22.17■■□□□ 1.14
SCARB2-223ENST00000640640 SUPT6HQ7KZ85 1726 aaKnown RBP22.17■■□□□ 1.14
SCARB2-223ENST00000640640 COG3Q96JB2 828 aa22.16■■□□□ 1.14
SCARB2-223ENST00000640640 NGEFQ8N5V2 710 aa22.16■■□□□ 1.14
SCARB2-223ENST00000640640 MCCP23508 829 aa22.16■■□□□ 1.14
SCARB2-223ENST00000640640 CRBNQ96SW2 442 aa22.16■■□□□ 1.14
SCARB2-223ENST00000640640 CHMP4AQ9BY43 222 aa22.16■■□□□ 1.14
SCARB2-223ENST00000640640 CFAP70Q5T0N1 1121 aa22.16■■□□□ 1.14
SCARB2-223ENST00000640640 PCF11O94913 1555 aaKnown RBP22.16■■□□□ 1.14
SCARB2-223ENST00000640640 CSB-PGBD3P0DP91 1061 aa22.15■■□□□ 1.14
SCARB2-223ENST00000640640 CENPQQ7L2Z9 268 aaPredicted RBP22.15■■□□□ 1.14
SCARB2-223ENST00000640640 SLKQ9H2G2 1235 aaPredicted RBP22.14■■□□□ 1.14
SCARB2-223ENST00000640640 ELL2O00472 640 aaPredicted RBP22.14■■□□□ 1.13
SCARB2-223ENST00000640640 TMEM132EQ6IEE7 984 aa22.13■■□□□ 1.13
SCARB2-223ENST00000640640 LTV1Q96GA3 475 aaPredicted RBP22.13■■□□□ 1.13
SCARB2-223ENST00000640640 BRD4O60885 1362 aaPredicted RBP22.12■■□□□ 1.13
SCARB2-223ENST00000640640 PTMAP06454 111 aaKnown RBP22.12■■□□□ 1.13
SCARB2-223ENST00000640640 IQGAP2Q13576 1575 aa22.12■■□□□ 1.13
SCARB2-223ENST00000640640 SLC4A10Q6U841 1118 aa22.12■■□□□ 1.13
SCARB2-223ENST00000640640 COG6Q9Y2V7 657 aa22.11■■□□□ 1.13
SCARB2-223ENST00000640640 DEKP35659 375 aaKnown RBP22.11■■□□□ 1.13
SCARB2-223ENST00000640640 MFAP1P55081 439 aaKnown RBP22.11■■□□□ 1.13
SCARB2-223ENST00000640640 WDR97A6NE52 1622 aa22.11■■□□□ 1.13
SCARB2-223ENST00000640640 ZRSR1Q15695 479 aaKnown RBP22.11■■□□□ 1.13
SCARB2-223ENST00000640640 MAP3K1Q13233 1512 aa22.1■■□□□ 1.13
SCARB2-223ENST00000640640 ZKSCAN2Q63HK3 967 aa22.1■■□□□ 1.13
SCARB2-223ENST00000640640 HMMRO75330 724 aa22.1■■□□□ 1.13
SCARB2-223ENST00000640640 UNC13AQ9UPW8 1703 aa22.09■■□□□ 1.13
SCARB2-223ENST00000640640 DIAPH1O60610 1272 aaKnown RBP22.09■■□□□ 1.13
SCARB2-223ENST00000640640 PLEKHH2Q8IVE3 1493 aa22.09■■□□□ 1.13
SCARB2-223ENST00000640640 CUL7Q14999 1698 aa22.09■■□□□ 1.13
SCARB2-223ENST00000640640 PDE4AP27815 886 aa22.09■■□□□ 1.13
SCARB2-223ENST00000640640 ROCK1Q13464 1354 aa22.07■■□□□ 1.12
SCARB2-223ENST00000640640 ADAMTS8Q9UP79 889 aa22.07■■□□□ 1.12
SCARB2-223ENST00000640640 SCAPERQ9BY12 1400 aa22.06■■□□□ 1.12
SCARB2-223ENST00000640640 BIVM-ERCC5R4GMW8 1640 aa22.06■■□□□ 1.12
SCARB2-223ENST00000640640 KIAA1211Q6ZU35 1233 aa22.05■■□□□ 1.12
SCARB2-223ENST00000640640 RUNDC1Q96C34 613 aa22.05■■□□□ 1.12
SCARB2-223ENST00000640640 NAP1L2Q9ULW6 460 aaPredicted RBP22.04■■□□□ 1.12
SCARB2-223ENST00000640640 NPHP1O15259 732 aa22.04■■□□□ 1.12
SCARB2-223ENST00000640640 GGNBP2Q9H3C7 697 aa22.03■■□□□ 1.12
SCARB2-223ENST00000640640 RTN4Q9NQC3 1192 aaKnown RBP22.03■■□□□ 1.12
SCARB2-223ENST00000640640 URB2Q14146 1524 aaKnown RBP22.03■■□□□ 1.12
SCARB2-223ENST00000640640 RIPK4P57078 832 aa22.03■■□□□ 1.12
SCARB2-223ENST00000640640 CABP2Q9NPB3 220 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms