RNA–Protein interactions for RNA: ENST00000640376.1

RTTN-216, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-216ENST00000640376 RSPH4AQ5TD94 716 aa12.31□□□□□ -0.44
RTTN-216ENST00000640376 TRPM1Q7Z4N2 1603 aa12.31□□□□□ -0.44
RTTN-216ENST00000640376 IQGAP3Q86VI3 1631 aa12.31□□□□□ -0.44
RTTN-216ENST00000640376 CCDC144AA2RUR9 1427 aa12.31□□□□□ -0.44
RTTN-216ENST00000640376 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.3□□□□□ -0.44
RTTN-216ENST00000640376 PLEKHH2Q8IVE3 1493 aa12.3□□□□□ -0.44
RTTN-216ENST00000640376 ROCK2O75116 1388 aaKnown RBP12.29□□□□□ -0.44
RTTN-216ENST00000640376 E9PCH4 1651 aa12.29□□□□□ -0.44
RTTN-216ENST00000640376 ZBED9Q6R2W3 1325 aa12.29□□□□□ -0.44
RTTN-216ENST00000640376 ARID4BQ4LE39 1312 aaPredicted RBP12.28□□□□□ -0.44
RTTN-216ENST00000640376 DUOX2Q9NRD8 1548 aa12.28□□□□□ -0.44
RTTN-216ENST00000640376 ST20-MTHFSA0A0A6YYL1 179 aa12.27□□□□□ -0.44
RTTN-216ENST00000640376 ABCC1P33527 1531 aa12.27□□□□□ -0.45
RTTN-216ENST00000640376 PRAG1Q86YV5 1406 aa12.27□□□□□ -0.45
RTTN-216ENST00000640376 PLA2R1Q13018 1463 aa12.26□□□□□ -0.45
RTTN-216ENST00000640376 RGL3Q3MIN7 710 aa12.26□□□□□ -0.45
RTTN-216ENST00000640376 A2MP01023 1474 aa12.25□□□□□ -0.45
RTTN-216ENST00000640376 PLCH2O75038 1416 aa12.25□□□□□ -0.45
RTTN-216ENST00000640376 MAGI2Q86UL8 1455 aa12.25□□□□□ -0.45
RTTN-216ENST00000640376 ERBINQ96RT1 1412 aa12.24□□□□□ -0.45
RTTN-216ENST00000640376 UHRF1BP1LA0JNW5 1464 aa12.24□□□□□ -0.45
RTTN-216ENST00000640376 EIF2AK4Q9P2K8 1649 aaKnown RBP12.22□□□□□ -0.45
RTTN-216ENST00000640376 TRAPPC8Q9Y2L5 1435 aa12.22□□□□□ -0.45
RTTN-216ENST00000640376 LAMC1P11047 1609 aa12.22□□□□□ -0.45
RTTN-216ENST00000640376 EFCAB2Q5VUJ9 269 aa12.21□□□□□ -0.45
RTTN-216ENST00000640376 PRDM15P57071 1507 aaPredicted RBP12.21□□□□□ -0.46
RTTN-216ENST00000640376 SENP3-EIF4A1A0A087X0R7 540 aa12.2□□□□□ -0.46
RTTN-216ENST00000640376 NBPF1Q3BBV0 1214 aa12.2□□□□□ -0.46
RTTN-216ENST00000640376 ZFYVE16Q7Z3T8 1539 aa12.2□□□□□ -0.46
RTTN-216ENST00000640376 TMC1Q8TDI8 760 aa12.19□□□□□ -0.46
RTTN-216ENST00000640376 RNF17Q9BXT8 1623 aaKnown RBP12.19□□□□□ -0.46
RTTN-216ENST00000640376 ATP10AO60312 1499 aa12.18□□□□□ -0.46
RTTN-216ENST00000640376 GPRASP1Q5JY77 1395 aa12.18□□□□□ -0.46
RTTN-216ENST00000640376 COL17A1Q9UMD9 1497 aaPredicted RBP12.18□□□□□ -0.46
RTTN-216ENST00000640376 RBM19Q9Y4C8 960 aaKnown RBP12.17□□□□□ -0.46
RTTN-216ENST00000640376 SPHKAPQ2M3C7 1700 aa12.17□□□□□ -0.46
RTTN-216ENST00000640376 SMG6Q86US8 1419 aaKnown RBP12.17□□□□□ -0.46
RTTN-216ENST00000640376 MYBBP1AQ9BQG0 1328 aaKnown RBP12.17□□□□□ -0.46
RTTN-216ENST00000640376 CEP152O94986 1710 aa12.16□□□□□ -0.46
RTTN-216ENST00000640376 SPAG9O60271 1321 aaKnown RBP12.16□□□□□ -0.46
RTTN-216ENST00000640376 ARAP3Q8WWN8 1544 aa12.16□□□□□ -0.46
RTTN-216ENST00000640376 PNISRQ8TF01 805 aaKnown RBP12.16□□□□□ -0.46
RTTN-216ENST00000640376 PPP4R2Q9NY27 417 aa12.16□□□□□ -0.46
RTTN-216ENST00000640376 ERICH6BQ5W0A0 696 aa12.16□□□□□ -0.46
RTTN-216ENST00000640376 ABCA9Q8IUA7 1624 aa12.16□□□□□ -0.46
RTTN-216ENST00000640376 DISP3Q9P2K9 1392 aa12.15□□□□□ -0.46
RTTN-216ENST00000640376 DEPDC5O75140 1603 aa12.15□□□□□ -0.46
RTTN-216ENST00000640376 MYT1Q01538 1121 aa12.15□□□□□ -0.46
RTTN-216ENST00000640376 WDR7Q9Y4E6 1490 aa12.15□□□□□ -0.46
RTTN-216ENST00000640376 MADDQ8WXG6 1647 aa12.15□□□□□ -0.46
RTTN-216ENST00000640376 AFAP1Q8N556 730 aa12.15□□□□□ -0.46
RTTN-216ENST00000640376 BRD4O60885 1362 aaPredicted RBP12.15□□□□□ -0.47
RTTN-216ENST00000640376 INO80Q9ULG1 1556 aaPredicted RBP12.14□□□□□ -0.47
RTTN-216ENST00000640376 KTN1Q86UP2 1357 aaKnown RBP12.14□□□□□ -0.47
RTTN-216ENST00000640376 TRPM2O94759 1503 aa12.14□□□□□ -0.47
RTTN-216ENST00000640376 RALBP1Q15311 655 aa12.14□□□□□ -0.47
RTTN-216ENST00000640376 ATP7AQ04656 1500 aa12.14□□□□□ -0.47
RTTN-216ENST00000640376 CLTCL1P53675 1640 aa12.14□□□□□ -0.47
RTTN-216ENST00000640376 NUDCQ9Y266 331 aa12.14□□□□□ -0.47
RTTN-216ENST00000640376 FANCAO15360 1455 aa12.13□□□□□ -0.47
RTTN-216ENST00000640376 TET3O43151 1660 aa12.13□□□□□ -0.47
RTTN-216ENST00000640376 LRPPRCP42704 1394 aaKnown RBP12.13□□□□□ -0.47
RTTN-216ENST00000640376 RTEL1-TNFRSF6BF6WH68 1400 aa12.13□□□□□ -0.47
RTTN-216ENST00000640376 B4GALNT3Q6L9W6 998 aa12.13□□□□□ -0.47
RTTN-216ENST00000640376 IQGAP1P46940 1657 aa12.12□□□□□ -0.47
RTTN-216ENST00000640376 TESK2Q96S53 571 aa12.12□□□□□ -0.47
RTTN-216ENST00000640376 PARD3Q8TEW0 1356 aa12.12□□□□□ -0.47
RTTN-216ENST00000640376 ADGRL1O94910 1474 aa12.1□□□□□ -0.47
RTTN-216ENST00000640376 NLRP13Q86W25 1043 aa12.09□□□□□ -0.47
RTTN-216ENST00000640376 MYT1LQ9UL68 1186 aa12.09□□□□□ -0.47
RTTN-216ENST00000640376 CC2D1BQ5T0F9 858 aaKnown RBP12.09□□□□□ -0.47
RTTN-216ENST00000640376 PER1O15534 1290 aaPredicted RBP12.08□□□□□ -0.48
RTTN-216ENST00000640376 TMF1P82094 1093 aa12.08□□□□□ -0.48
RTTN-216ENST00000640376 VWDEQ8N2E2 1590 aa12.07□□□□□ -0.48
RTTN-216ENST00000640376 MROH1Q8NDA8 1641 aa12.07□□□□□ -0.48
RTTN-216ENST00000640376 SCAPERQ9BY12 1400 aa12.07□□□□□ -0.48
RTTN-216ENST00000640376 PANK3Q9H999 370 aa12.07□□□□□ -0.48
RTTN-216ENST00000640376 PTPRTO14522 1441 aa12.07□□□□□ -0.48
RTTN-216ENST00000640376 KANK1Q14678 1352 aa12.06□□□□□ -0.48
RTTN-216ENST00000640376 ASXL2Q76L83 1435 aa12.06□□□□□ -0.48
RTTN-216ENST00000640376 SALL2Q9Y467 1007 aaPredicted RBP12.06□□□□□ -0.48
RTTN-216ENST00000640376 UGGT1Q9NYU2 1555 aa12.06□□□□□ -0.48
RTTN-216ENST00000640376 KIF3BO15066 747 aa12.05□□□□□ -0.48
RTTN-216ENST00000640376 ANP32EQ9BTT0 268 aa12.05□□□□□ -0.48
RTTN-216ENST00000640376 RNF123Q5XPI4 1314 aa12.05□□□□□ -0.48
RTTN-216ENST00000640376 KIDINS220Q9ULH0 1771 aa12.05□□□□□ -0.48
RTTN-216ENST00000640376 KIF1BO60333 1816 aa12.04□□□□□ -0.48
RTTN-216ENST00000640376 MYOM1P52179 1685 aa12.04□□□□□ -0.48
RTTN-216ENST00000640376 MROH2AA6NES4 1674 aa12.03□□□□□ -0.48
RTTN-216ENST00000640376 SCAF11Q99590 1463 aaKnown RBP12.03□□□□□ -0.48
RTTN-216ENST00000640376 SYNMO15061 1565 aa12.03□□□□□ -0.48
RTTN-216ENST00000640376 PPRC1Q5VV67 1664 aaKnown RBP12.03□□□□□ -0.48
RTTN-216ENST00000640376 KIAA1210Q9ULL0 1709 aa12.03□□□□□ -0.48
RTTN-216ENST00000640376 ABCA6Q8N139 1617 aa12.03□□□□□ -0.48
RTTN-216ENST00000640376 EFCAB6Q5THR3 1501 aa12.03□□□□□ -0.48
RTTN-216ENST00000640376 WASHC2CQ9Y4E1 1318 aa12.02□□□□□ -0.48
RTTN-216ENST00000640376 IFT172Q9UG01 1749 aa12.02□□□□□ -0.49
RTTN-216ENST00000640376 MAP3K4Q9Y6R4 1608 aa12.01□□□□□ -0.49
RTTN-216ENST00000640376 KDM5AP29375 1690 aaKnown RBP12.01□□□□□ -0.49
RTTN-216ENST00000640376 CCDC136Q96JN2 1154 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms