RNA–Protein interactions for RNA: ENST00000640264.1

HNRNPU-227, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 3

Gene HNRNPU, Length 328 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-227ENST00000640264 TNRQ92752 1358 aa16.83■□□□□ 0.28
HNRNPU-227ENST00000640264 CPS1P31327 1500 aa16.82■□□□□ 0.28
HNRNPU-227ENST00000640264 EHBP1L1Q8N3D4 1523 aa16.82■□□□□ 0.28
HNRNPU-227ENST00000640264 KIF3BO15066 747 aa16.82■□□□□ 0.28
HNRNPU-227ENST00000640264 PIP4K2BP78356 416 aa16.81■□□□□ 0.28
HNRNPU-227ENST00000640264 FBXO31Q5XUX0 539 aaPredicted RBP16.81■□□□□ 0.28
HNRNPU-227ENST00000640264 WASHC2CQ9Y4E1 1318 aa16.8■□□□□ 0.28
HNRNPU-227ENST00000640264 HSPA1LP34931 641 aa16.8■□□□□ 0.28
HNRNPU-227ENST00000640264 ANKLE2Q86XL3 938 aa16.8■□□□□ 0.28
HNRNPU-227ENST00000640264 KDM5DQ9BY66 1539 aa16.8■□□□□ 0.28
HNRNPU-227ENST00000640264 FAM135AQ9P2D6 1515 aa16.8■□□□□ 0.28
HNRNPU-227ENST00000640264 PZPP20742 1482 aa16.8■□□□□ 0.28
HNRNPU-227ENST00000640264 SHANK2Q9UPX8 1470 aa16.8■□□□□ 0.28
HNRNPU-227ENST00000640264 CEP162Q5TB80 1403 aa16.79■□□□□ 0.28
HNRNPU-227ENST00000640264 RSPH4AQ5TD94 716 aa16.79■□□□□ 0.28
HNRNPU-227ENST00000640264 THEMISQ8N1K5 641 aaPredicted RBP16.79■□□□□ 0.28
HNRNPU-227ENST00000640264 NEURL4Q96JN8 1562 aa16.78■□□□□ 0.28
HNRNPU-227ENST00000640264 CCDC141Q6ZP82 1450 aa16.78■□□□□ 0.28
HNRNPU-227ENST00000640264 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.76■□□□□ 0.27
HNRNPU-227ENST00000640264 NLRP1Q9C000 1473 aa16.75■□□□□ 0.27
HNRNPU-227ENST00000640264 MIA2Q96PC5 1412 aa16.75■□□□□ 0.27
HNRNPU-227ENST00000640264 MED1Q15648 1581 aaPredicted RBP16.75■□□□□ 0.27
HNRNPU-227ENST00000640264 CAMSAP2Q08AD1 1489 aa16.73■□□□□ 0.27
HNRNPU-227ENST00000640264 TSPY4P0CV99 314 aa16.73■□□□□ 0.27
HNRNPU-227ENST00000640264 TSPY10P0CW01 314 aa16.73■□□□□ 0.27
HNRNPU-227ENST00000640264 UGGT1Q9NYU2 1555 aa16.72■□□□□ 0.27
HNRNPU-227ENST00000640264 NPHP4O75161 1426 aaPredicted RBP16.72■□□□□ 0.27
HNRNPU-227ENST00000640264 DEPDC5O75140 1603 aa16.72■□□□□ 0.27
HNRNPU-227ENST00000640264 NCOA2Q15596 1464 aa16.72■□□□□ 0.27
HNRNPU-227ENST00000640264 VWDEQ8N2E2 1590 aa16.72■□□□□ 0.27
HNRNPU-227ENST00000640264 MED14O60244 1454 aa16.71■□□□□ 0.27
HNRNPU-227ENST00000640264 PHF23Q9BUL5 403 aaPredicted RBP16.69■□□□□ 0.26
HNRNPU-227ENST00000640264 ARHGEF5Q12774 1597 aa16.68■□□□□ 0.26
HNRNPU-227ENST00000640264 IQGAP1P46940 1657 aa16.68■□□□□ 0.26
HNRNPU-227ENST00000640264 ZC3H13Q5T200 1668 aaKnown RBP16.65■□□□□ 0.26
HNRNPU-227ENST00000640264 RNF17Q9BXT8 1623 aaKnown RBP16.64■□□□□ 0.25
HNRNPU-227ENST00000640264 ABCC3O15438 1527 aa16.64■□□□□ 0.25
HNRNPU-227ENST00000640264 ALKQ9UM73 1620 aa16.63■□□□□ 0.25
HNRNPU-227ENST00000640264 LRRC7Q96NW7 1537 aa16.62■□□□□ 0.25
HNRNPU-227ENST00000640264 STRCP1A6NGW2 1772 aa16.61■□□□□ 0.25
HNRNPU-227ENST00000640264 SYNMO15061 1565 aa16.61■□□□□ 0.25
HNRNPU-227ENST00000640264 MAST1Q9Y2H9 1570 aa16.61■□□□□ 0.25
HNRNPU-227ENST00000640264 EIF2AK4Q9P2K8 1649 aaKnown RBP16.61■□□□□ 0.25
HNRNPU-227ENST00000640264 SENP3Q9H4L4 574 aaPredicted RBP16.61■□□□□ 0.25
HNRNPU-227ENST00000640264 ERVK-7P63135 1459 aa16.61■□□□□ 0.25
HNRNPU-227ENST00000640264 CFAP65Q6ZU64 1925 aaKnown RBP16.6■□□□□ 0.25
HNRNPU-227ENST00000640264 UBR1Q8IWV7 1749 aa16.58■□□□□ 0.24
HNRNPU-227ENST00000640264 LRRC9Q6ZRR7 1453 aa16.57■□□□□ 0.24
HNRNPU-227ENST00000640264 SCAF11Q99590 1463 aaKnown RBP16.57■□□□□ 0.24
HNRNPU-227ENST00000640264 CEP152O94986 1710 aa16.56■□□□□ 0.24
HNRNPU-227ENST00000640264 TXNDC2Q86VQ3 553 aa16.56■□□□□ 0.24
HNRNPU-227ENST00000640264 MROH1Q8NDA8 1641 aa16.56■□□□□ 0.24
HNRNPU-227ENST00000640264 LOC105371045A0A1W2PR82 267 aa16.55■□□□□ 0.24
HNRNPU-227ENST00000640264 EID1Q9Y6B2 187 aa16.54■□□□□ 0.24
HNRNPU-227ENST00000640264 DUOX2Q9NRD8 1548 aa16.54■□□□□ 0.24
HNRNPU-227ENST00000640264 LTKP29376 864 aa16.53■□□□□ 0.24
HNRNPU-227ENST00000640264 MYOM3Q5VTT5 1437 aa16.53■□□□□ 0.24
HNRNPU-227ENST00000640264 SLIT1O75093 1534 aa16.52■□□□□ 0.24
HNRNPU-227ENST00000640264 ARHGAP23Q9P227 1491 aa16.52■□□□□ 0.23
HNRNPU-227ENST00000640264 VPS8Q8N3P4 1428 aa16.52■□□□□ 0.23
HNRNPU-227ENST00000640264 ARHGAP31Q2M1Z3 1444 aa16.51■□□□□ 0.23
HNRNPU-227ENST00000640264 HRCP23327 699 aa16.49■□□□□ 0.23
HNRNPU-227ENST00000640264 KANK4Q5T7N3 995 aaPredicted RBP16.49■□□□□ 0.23
HNRNPU-227ENST00000640264 STAG3Q9UJ98 1225 aa16.49■□□□□ 0.23
HNRNPU-227ENST00000640264 XIRP1Q702N8 1843 aaKnown RBP16.49■□□□□ 0.23
HNRNPU-227ENST00000640264 KIF15Q9NS87 1388 aa16.49■□□□□ 0.23
HNRNPU-227ENST00000640264 PRDM15P57071 1507 aaPredicted RBP16.48■□□□□ 0.23
HNRNPU-227ENST00000640264 MAP3K1Q13233 1512 aa16.48■□□□□ 0.23
HNRNPU-227ENST00000640264 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.47■□□□□ 0.232e-14■■□□□ 11.6
HNRNPU-227ENST00000640264 RRP7BPQ9NSQ0 103 aa16.47■□□□□ 0.23
HNRNPU-227ENST00000640264 TMEM2Q9UHN6 1383 aa16.47■□□□□ 0.23
HNRNPU-227ENST00000640264 ERBINQ96RT1 1412 aa16.46■□□□□ 0.23
HNRNPU-227ENST00000640264 PIK3C2BO00750 1634 aa16.46■□□□□ 0.23
HNRNPU-227ENST00000640264 RGS17Q9UGC6 210 aaPredicted RBP16.46■□□□□ 0.23
HNRNPU-227ENST00000640264 KANK1Q14678 1352 aa16.46■□□□□ 0.23
HNRNPU-227ENST00000640264 FAM135BQ49AJ0 1406 aa16.45■□□□□ 0.22
HNRNPU-227ENST00000640264 KCNA6P17658 529 aa16.43■□□□□ 0.22
HNRNPU-227ENST00000640264 ABCC5O15440 1437 aa16.43■□□□□ 0.22
HNRNPU-227ENST00000640264 CROCC2H7BZ55 1655 aa16.43■□□□□ 0.22
HNRNPU-227ENST00000640264 KDM5AP29375 1690 aaKnown RBP16.43■□□□□ 0.22
HNRNPU-227ENST00000640264 TMEM94Q12767 1356 aa16.42■□□□□ 0.22
HNRNPU-227ENST00000640264 EFCAB6Q5THR3 1501 aa16.42■□□□□ 0.22
HNRNPU-227ENST00000640264 IDI1Q13907 227 aa16.41■□□□□ 0.22
HNRNPU-227ENST00000640264 PROSER2Q86WR7 435 aaPredicted RBP16.41■□□□□ 0.22
HNRNPU-227ENST00000640264 PTPN23Q9H3S7 1636 aa16.4■□□□□ 0.22
HNRNPU-227ENST00000640264 SLC26A8Q96RN1 970 aa16.39■□□□□ 0.21
HNRNPU-227ENST00000640264 DAPK1P53355 1430 aa16.38■□□□□ 0.21
HNRNPU-227ENST00000640264 ROBO1Q9Y6N7 1651 aa16.38■□□□□ 0.21
HNRNPU-227ENST00000640264 APLP2Q06481 763 aa16.38■□□□□ 0.21
HNRNPU-227ENST00000640264 PCGF6Q9BYE7 350 aa16.38■□□□□ 0.21
HNRNPU-227ENST00000640264 TET3O43151 1660 aa16.37■□□□□ 0.21
HNRNPU-227ENST00000640264 LMTK2Q8IWU2 1503 aa16.37■□□□□ 0.21
HNRNPU-227ENST00000640264 POTEAQ6S8J7 498 aa16.37■□□□□ 0.21
HNRNPU-227ENST00000640264 BCANQ96GW7 911 aa16.37■□□□□ 0.21
HNRNPU-227ENST00000640264 ANKRD30AQ9BXX3 1397 aa16.37■□□□□ 0.21
HNRNPU-227ENST00000640264 RBM33Q96EV2 1170 aaKnown RBP16.36■□□□□ 0.21
HNRNPU-227ENST00000640264 TRIM26Q12899 539 aaPredicted RBP16.35■□□□□ 0.21
HNRNPU-227ENST00000640264 SLC52A1Q9NWF4 448 aa16.35■□□□□ 0.21
HNRNPU-227ENST00000640264 NKTRP30414 1462 aaKnown RBP16.35■□□□□ 0.21
HNRNPU-227ENST00000640264 CHIC2Q9UKJ5 165 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms