RNA–Protein interactions for RNA: ENST00000640027.1

MED17-222, Transcript of mediator complex subunit 17, humanhuman

TSL 5

Gene MED17, Length 4,569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED17-222ENST00000640027 TOMM22Q9NS69 142 aa17.43■□□□□ 0.38
MED17-222ENST00000640027 GPATCH3Q96I76 525 aa17.42■□□□□ 0.38
MED17-222ENST00000640027 AMER1Q5JTC6 1135 aaPredicted RBP17.42■□□□□ 0.38
MED17-222ENST00000640027 RALBP1Q15311 655 aa17.42■□□□□ 0.38
MED17-222ENST00000640027 SETD5Q9C0A6 1442 aa17.41■□□□□ 0.38
MED17-222ENST00000640027 IGF1RP08069 1367 aa17.41■□□□□ 0.38
MED17-222ENST00000640027 ANKRD30AQ9BXX3 1397 aa17.41■□□□□ 0.38
MED17-222ENST00000640027 RASSF8Q8NHQ8 419 aa17.41■□□□□ 0.38
MED17-222ENST00000640027 GBP4Q96PP9 640 aa17.4■□□□□ 0.38
MED17-222ENST00000640027 SLKQ9H2G2 1235 aaPredicted RBP17.4■□□□□ 0.38
MED17-222ENST00000640027 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.4■□□□□ 0.38
MED17-222ENST00000640027 HNRNPMP52272 730 aaKnown RBP eCLIP17.39■□□□□ 0.37
MED17-222ENST00000640027 KANK4Q5T7N3 995 aaPredicted RBP17.38■□□□□ 0.37
MED17-222ENST00000640027 TRAK1Q9UPV9 953 aa17.38■□□□□ 0.37
MED17-222ENST00000640027 LMOD3Q0VAK6 560 aa17.38■□□□□ 0.37
MED17-222ENST00000640027 ARHGAP35Q9NRY4 1499 aa17.37■□□□□ 0.37
MED17-222ENST00000640027 DNMBPQ6XZF7 1577 aa17.36■□□□□ 0.37
MED17-222ENST00000640027 HSP90B1P14625 803 aaKnown RBP17.36■□□□□ 0.37
MED17-222ENST00000640027 EIF3AQ14152 1382 aaKnown RBP17.36■□□□□ 0.37
MED17-222ENST00000640027 PDS5BQ9NTI5 1447 aa17.36■□□□□ 0.37
MED17-222ENST00000640027 PRM3Q9NNZ6 103 aa17.35■□□□□ 0.37
MED17-222ENST00000640027 TOPBP1Q92547 1522 aa17.35■□□□□ 0.37
MED17-222ENST00000640027 RSPH4AQ5TD94 716 aa17.35■□□□□ 0.37
MED17-222ENST00000640027 GZF1Q9H116 711 aaPredicted RBP17.35■□□□□ 0.37
MED17-222ENST00000640027 NOC3LQ8WTT2 800 aaKnown RBP17.34■□□□□ 0.37
MED17-222ENST00000640027 RAD54L2Q9Y4B4 1467 aa17.34■□□□□ 0.37
MED17-222ENST00000640027 LAMC3Q9Y6N6 1575 aa17.34■□□□□ 0.37
MED17-222ENST00000640027 MFAP1P55081 439 aaKnown RBP17.34■□□□□ 0.37
MED17-222ENST00000640027 PMFBP1Q8TBY8 1022 aa17.34■□□□□ 0.37
MED17-222ENST00000640027 MARCH6O60337 910 aa17.33■□□□□ 0.37
MED17-222ENST00000640027 NLRP13Q86W25 1043 aa17.33■□□□□ 0.36
MED17-222ENST00000640027 CCDC146Q8IYE0 955 aa17.33■□□□□ 0.36
MED17-222ENST00000640027 PDE4CQ08493 712 aa17.32■□□□□ 0.36
MED17-222ENST00000640027 L3MBTL2Q969R5 705 aa17.32■□□□□ 0.36
MED17-222ENST00000640027 SYAP1Q96A49 352 aaPredicted RBP17.32■□□□□ 0.36
MED17-222ENST00000640027 MSH5O43196 834 aa17.32■□□□□ 0.36
MED17-222ENST00000640027 DNAJC5BQ9UF47 199 aa17.32■□□□□ 0.36
MED17-222ENST00000640027 ELL2O00472 640 aaPredicted RBP17.31■□□□□ 0.36
MED17-222ENST00000640027 ARAP1Q96P48 1450 aa17.31■□□□□ 0.36
MED17-222ENST00000640027 NOL8Q76FK4 1167 aaKnown RBP17.31■□□□□ 0.36
MED17-222ENST00000640027 VPS53Q5VIR6 699 aa17.31■□□□□ 0.36
MED17-222ENST00000640027 POLA1P09884 1462 aaPredicted RBP17.31■□□□□ 0.36
MED17-222ENST00000640027 EVA1CP58658 441 aa17.3■□□□□ 0.36
MED17-222ENST00000640027 CREBRFQ8IUR6 639 aa17.3■□□□□ 0.36
MED17-222ENST00000640027 TEFQ10587 303 aa17.3■□□□□ 0.36
MED17-222ENST00000640027 JPH4Q96JJ6 628 aa17.3■□□□□ 0.36
MED17-222ENST00000640027 TPM4P67936 248 aa17.29■□□□□ 0.36
MED17-222ENST00000640027 FMN1Q68DA7 1419 aa17.29■□□□□ 0.36
MED17-222ENST00000640027 CYB5RLQ6IPT4 315 aa17.29■□□□□ 0.36
MED17-222ENST00000640027 KIF3AQ9Y496 699 aa17.29■□□□□ 0.36
MED17-222ENST00000640027 CENPJQ9HC77 1338 aaPredicted RBP17.29■□□□□ 0.36
MED17-222ENST00000640027 TCERG1O14776 1098 aaKnown RBP17.28■□□□□ 0.36
MED17-222ENST00000640027 SF3A1Q15459 793 aaKnown RBP17.28■□□□□ 0.36
MED17-222ENST00000640027 CEP89Q96ST8 783 aa17.27■□□□□ 0.35
MED17-222ENST00000640027 PTMSP20962 102 aa17.26■□□□□ 0.35
MED17-222ENST00000640027 ABCA10Q8WWZ4 1543 aa17.26■□□□□ 0.35
MED17-222ENST00000640027 C1orf141Q5JVX7 400 aa17.26■□□□□ 0.35
MED17-222ENST00000640027 RRP7AQ9Y3A4 280 aaKnown RBP17.25■□□□□ 0.35
MED17-222ENST00000640027 RAB3GAP2Q9H2M9 1393 aa17.25■□□□□ 0.35
MED17-222ENST00000640027 COG3Q96JB2 828 aa17.24■□□□□ 0.35
MED17-222ENST00000640027 KIF16BQ96L93 1317 aa17.24■□□□□ 0.35
MED17-222ENST00000640027 VGFO15240 615 aaPredicted RBP17.24■□□□□ 0.35
MED17-222ENST00000640027 RBM19Q9Y4C8 960 aaKnown RBP17.23■□□□□ 0.35
MED17-222ENST00000640027 NGEFQ8N5V2 710 aa17.23■□□□□ 0.35
MED17-222ENST00000640027 URB2Q14146 1524 aaKnown RBP17.22■□□□□ 0.35
MED17-222ENST00000640027 NEXNQ0ZGT2 675 aa17.21■□□□□ 0.35
MED17-222ENST00000640027 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.21■□□□□ 0.35
MED17-222ENST00000640027 PDE3BQ13370 1112 aa17.21■□□□□ 0.35
MED17-222ENST00000640027 CSPP1Q1MSJ5 1256 aa17.21■□□□□ 0.35
MED17-222ENST00000640027 TTC5Q8N0Z6 440 aa17.21■□□□□ 0.35
MED17-222ENST00000640027 FOXD4L1Q9NU39 408 aa17.21■□□□□ 0.35
MED17-222ENST00000640027 ST20-MTHFSA0A0A6YYL1 179 aa17.2■□□□□ 0.34
MED17-222ENST00000640027 ST18O60284 1047 aa17.2■□□□□ 0.34
MED17-222ENST00000640027 SYTL4Q96C24 671 aaPredicted RBP17.2■□□□□ 0.34
MED17-222ENST00000640027 BCL2L13Q9BXK5 485 aa17.2■□□□□ 0.34
MED17-222ENST00000640027 PES1O00541 588 aaKnown RBP17.19■□□□□ 0.34
MED17-222ENST00000640027 AKAP17AQ02040 695 aaKnown RBP17.19■□□□□ 0.34
MED17-222ENST00000640027 RILPL2Q969X0 211 aa17.19■□□□□ 0.34
MED17-222ENST00000640027 A0A0U1RQG5 324 aaPredicted RBP17.19■□□□□ 0.34
MED17-222ENST00000640027 WWC1Q8IX03 1113 aa17.18■□□□□ 0.34
MED17-222ENST00000640027 MINK1Q8N4C8 1332 aaPredicted RBP17.18■□□□□ 0.34
MED17-222ENST00000640027 TPM3P06753 285 aa17.18■□□□□ 0.34
MED17-222ENST00000640027 RAD21O60216 631 aa17.17■□□□□ 0.34
MED17-222ENST00000640027 DEKP35659 375 aaKnown RBP17.17■□□□□ 0.34
MED17-222ENST00000640027 CPLX2Q6PUV4 134 aaKnown RBP17.17■□□□□ 0.34
MED17-222ENST00000640027 EIF2S2P20042 333 aaKnown RBP17.17■□□□□ 0.34
MED17-222ENST00000640027 PANK3Q9H999 370 aa17.16■□□□□ 0.34
MED17-222ENST00000640027 C9orf78Q9NZ63 289 aaPredicted RBP17.16■□□□□ 0.34
MED17-222ENST00000640027 PRKCSHP14314 528 aaPredicted RBP17.16■□□□□ 0.34
MED17-222ENST00000640027 FOXD4L5Q5VV16 416 aaPredicted RBP17.15■□□□□ 0.34
MED17-222ENST00000640027 FAM184AQ8NB25 1140 aa17.15■□□□□ 0.34
MED17-222ENST00000640027 FOXD4L4Q8WXT5 416 aaPredicted RBP17.15■□□□□ 0.34
MED17-222ENST00000640027 NOL10Q9BSC4 688 aaKnown RBP17.15■□□□□ 0.34
MED17-222ENST00000640027 H3BQV1 296 aa17.14■□□□□ 0.34
MED17-222ENST00000640027 IFFO2Q5TF58 517 aa17.14■□□□□ 0.34
MED17-222ENST00000640027 SYNE3Q6ZMZ3 975 aa17.14■□□□□ 0.34
MED17-222ENST00000640027 CGNL1Q0VF96 1302 aa17.14■□□□□ 0.34
MED17-222ENST00000640027 EVC2Q86UK5 1308 aa17.14■□□□□ 0.34
MED17-222ENST00000640027 LRRFIP1Q32MZ4 808 aaKnown RBP17.14■□□□□ 0.33
MED17-222ENST00000640027 ARID3AQ99856 593 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms