RNA–Protein interactions for RNA: ENST00000639943.1

PAX6-261, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-261ENST00000639943 CD109Q6YHK3 1445 aa17.3■□□□□ 0.36
PAX6-261ENST00000639943 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.3■□□□□ 0.36
PAX6-261ENST00000639943 EIF4G2P78344 907 aaKnown RBP eCLIP17.28■□□□□ 0.36
PAX6-261ENST00000639943 NBPF8Q3BBV2 869 aa17.28■□□□□ 0.36
PAX6-261ENST00000639943 DDX10Q13206 875 aaKnown RBP17.28■□□□□ 0.36
PAX6-261ENST00000639943 CENPBP07199 599 aaPredicted RBP17.27■□□□□ 0.36
PAX6-261ENST00000639943 HSPA5P11021 654 aaKnown RBP17.26■□□□□ 0.35
PAX6-261ENST00000639943 SENP3Q9H4L4 574 aaPredicted RBP17.25■□□□□ 0.35
PAX6-261ENST00000639943 RIMBP3CA6NJZ7 1639 aa17.25■□□□□ 0.35
PAX6-261ENST00000639943 RIMBP3BA6NNM3 1639 aa17.25■□□□□ 0.35
PAX6-261ENST00000639943 RIMBP3Q9UFD9 1639 aa17.25■□□□□ 0.35
PAX6-261ENST00000639943 ZNF518AQ6AHZ1 1483 aa17.24■□□□□ 0.35
PAX6-261ENST00000639943 DEPDC5O75140 1603 aa17.23■□□□□ 0.35
PAX6-261ENST00000639943 CCDC144AA2RUR9 1427 aa17.23■□□□□ 0.35
PAX6-261ENST00000639943 MYT1LQ9UL68 1186 aa17.23■□□□□ 0.35
PAX6-261ENST00000639943 UHRF1BP1Q6BDS2 1440 aa17.22■□□□□ 0.35
PAX6-261ENST00000639943 CYB5RLQ6IPT4 315 aa17.22■□□□□ 0.35
PAX6-261ENST00000639943 EIF2AK4Q9P2K8 1649 aaKnown RBP17.22■□□□□ 0.35
PAX6-261ENST00000639943 ATP10AO60312 1499 aa17.21■□□□□ 0.35
PAX6-261ENST00000639943 DHX29Q7Z478 1369 aaKnown RBP17.21■□□□□ 0.35
PAX6-261ENST00000639943 KIDINS220Q9ULH0 1771 aa17.21■□□□□ 0.35
PAX6-261ENST00000639943 PLA2R1Q13018 1463 aa17.21■□□□□ 0.34
PAX6-261ENST00000639943 NEO1Q92859 1461 aa17.2■□□□□ 0.34
PAX6-261ENST00000639943 POGZQ7Z3K3 1410 aa17.19■□□□□ 0.34
PAX6-261ENST00000639943 KDM5CP41229 1560 aa17.18■□□□□ 0.34
PAX6-261ENST00000639943 KANK1Q14678 1352 aa17.18■□□□□ 0.34
PAX6-261ENST00000639943 SPATA31E1Q6ZUB1 1445 aa17.17■□□□□ 0.34
PAX6-261ENST00000639943 YTHDC1Q96MU7 727 aaKnown RBP17.17■□□□□ 0.34
PAX6-261ENST00000639943 GLI2P10070 1586 aa17.16■□□□□ 0.34
PAX6-261ENST00000639943 MAP3K4Q9Y6R4 1608 aa17.16■□□□□ 0.34
PAX6-261ENST00000639943 RALGAPBQ86X10 1494 aa17.16■□□□□ 0.34
PAX6-261ENST00000639943 MLH3Q9UHC1 1453 aa17.16■□□□□ 0.34
PAX6-261ENST00000639943 ZNF326Q5BKZ1 582 aaKnown RBP17.16■□□□□ 0.34
PAX6-261ENST00000639943 E9PCH4 1651 aa17.16■□□□□ 0.34
PAX6-261ENST00000639943 TET3O43151 1660 aa17.16■□□□□ 0.34
PAX6-261ENST00000639943 VWDEQ8N2E2 1590 aa17.16■□□□□ 0.34
PAX6-261ENST00000639943 KIF3BO15066 747 aa17.15■□□□□ 0.34
PAX6-261ENST00000639943 DCAF11Q8TEB1 546 aa17.15■□□□□ 0.34
PAX6-261ENST00000639943 WASHC2AQ641Q2 1341 aa17.14■□□□□ 0.33
PAX6-261ENST00000639943 HECW2Q9P2P5 1572 aa17.14■□□□□ 0.33
PAX6-261ENST00000639943 PRDM15P57071 1507 aaPredicted RBP17.14■□□□□ 0.33
PAX6-261ENST00000639943 POLR1AO95602 1720 aaPredicted RBP17.13■□□□□ 0.33
PAX6-261ENST00000639943 A2MP01023 1474 aa17.13■□□□□ 0.33
PAX6-261ENST00000639943 DNAJC5Q9H3Z4 198 aa17.13■□□□□ 0.33
PAX6-261ENST00000639943 ANP32CO43423 234 aa17.12■□□□□ 0.33
PAX6-261ENST00000639943 KDM2AQ9Y2K7 1162 aa17.12■□□□□ 0.33
PAX6-261ENST00000639943 MROH1Q8NDA8 1641 aa17.11■□□□□ 0.33
PAX6-261ENST00000639943 SPHKAPQ2M3C7 1700 aa17.11■□□□□ 0.33
PAX6-261ENST00000639943 TRPM2O94759 1503 aa17.11■□□□□ 0.33
PAX6-261ENST00000639943 USP47Q96K76 1375 aa17.1■□□□□ 0.33
PAX6-261ENST00000639943 CCDC7Q96M83 1385 aa17.1■□□□□ 0.33
PAX6-261ENST00000639943 PTPRTO14522 1441 aa17.1■□□□□ 0.33
PAX6-261ENST00000639943 RNF17Q9BXT8 1623 aaKnown RBP17.09■□□□□ 0.33
PAX6-261ENST00000639943 RGL3Q3MIN7 710 aa17.09■□□□□ 0.33
PAX6-261ENST00000639943 PRAG1Q86YV5 1406 aa17.08■□□□□ 0.33
PAX6-261ENST00000639943 CARD11Q9BXL7 1154 aa17.07■□□□□ 0.32
PAX6-261ENST00000639943 BCORL1Q5H9F3 1711 aa17.07■□□□□ 0.32
PAX6-261ENST00000639943 RICTORQ6R327 1708 aa17.07■□□□□ 0.32
PAX6-261ENST00000639943 TRPM1Q7Z4N2 1603 aa17.06■□□□□ 0.32
PAX6-261ENST00000639943 ABCA6Q8N139 1617 aa17.06■□□□□ 0.32
PAX6-261ENST00000639943 C11orf95C9JLR9 678 aaPredicted RBP17.06■□□□□ 0.32
PAX6-261ENST00000639943 CCER2I3L3R5 266 aa17.06■□□□□ 0.32
PAX6-261ENST00000639943 CEP152O94986 1710 aa17.06■□□□□ 0.32
PAX6-261ENST00000639943 DIP2BQ9P265 1576 aa17.06■□□□□ 0.32
PAX6-261ENST00000639943 LMTK2Q8IWU2 1503 aa17.06■□□□□ 0.32
PAX6-261ENST00000639943 FRMPD1Q5SYB0 1578 aa17.06■□□□□ 0.32
PAX6-261ENST00000639943 CNTLNQ9NXG0 1405 aa17.05■□□□□ 0.32
PAX6-261ENST00000639943 RAPGEF3O95398 923 aa17.05■□□□□ 0.32
PAX6-261ENST00000639943 FAM69CQ0P6D2 419 aa17.04■□□□□ 0.32
PAX6-261ENST00000639943 EFCAB6Q5THR3 1501 aa17.04■□□□□ 0.32
PAX6-261ENST00000639943 ROCK2O75116 1388 aaKnown RBP17.04■□□□□ 0.32
PAX6-261ENST00000639943 KIF7Q2M1P5 1343 aa17.03■□□□□ 0.32
PAX6-261ENST00000639943 CLTCL1P53675 1640 aa17.03■□□□□ 0.32
PAX6-261ENST00000639943 ARID4BQ4LE39 1312 aaPredicted RBP17.03■□□□□ 0.32
PAX6-261ENST00000639943 STAC3Q96MF2 364 aa17.02■□□□□ 0.31
PAX6-261ENST00000639943 PPRC1Q5VV67 1664 aaKnown RBP17.01■□□□□ 0.31
PAX6-261ENST00000639943 LAMC1P11047 1609 aa17.01■□□□□ 0.31
PAX6-261ENST00000639943 DIP2CQ9Y2E4 1556 aa17.01■□□□□ 0.31
PAX6-261ENST00000639943 NEURL4Q96JN8 1562 aa17■□□□□ 0.31
PAX6-261ENST00000639943 GPRASP1Q5JY77 1395 aa17■□□□□ 0.31
PAX6-261ENST00000639943 SCAF1Q9H7N4 1312 aaKnown RBP17■□□□□ 0.31
PAX6-261ENST00000639943 DAXXQ9UER7 740 aaPredicted RBP16.97■□□□□ 0.31
PAX6-261ENST00000639943 TSPOAP1O95153 1857 aa16.97■□□□□ 0.31
PAX6-261ENST00000639943 GGT6Q6P531 493 aa16.97■□□□□ 0.31
PAX6-261ENST00000639943 KIF1BO60333 1816 aa16.97■□□□□ 0.31
PAX6-261ENST00000639943 ZMYM4Q5VZL5 1548 aa16.96■□□□□ 0.31
PAX6-261ENST00000639943 ST20-MTHFSA0A0A6YYL1 179 aa16.96■□□□□ 0.31
PAX6-261ENST00000639943 NBPF1Q3BBV0 1214 aa16.95■□□□□ 0.3
PAX6-261ENST00000639943 MADDQ8WXG6 1647 aa16.95■□□□□ 0.3
PAX6-261ENST00000639943 ABCC3O15438 1527 aa16.94■□□□□ 0.3
PAX6-261ENST00000639943 WASHC2CQ9Y4E1 1318 aa16.94■□□□□ 0.3
PAX6-261ENST00000639943 YEATS2Q9ULM3 1422 aa16.93■□□□□ 0.3
PAX6-261ENST00000639943 NPATQ14207 1427 aa16.92■□□□□ 0.3
PAX6-261ENST00000639943 CAMSAP1Q5T5Y3 1602 aa16.92■□□□□ 0.3
PAX6-261ENST00000639943 ZC3H13Q5T200 1668 aaKnown RBP16.91■□□□□ 0.3
PAX6-261ENST00000639943 CFAP65Q6ZU64 1925 aaKnown RBP16.91■□□□□ 0.3
PAX6-261ENST00000639943 NCBP3Q53F19 620 aaKnown RBP16.9■□□□□ 0.3
PAX6-261ENST00000639943 UGGT1Q9NYU2 1555 aa16.9■□□□□ 0.3
PAX6-261ENST00000639943 KIF13AQ9H1H9 1805 aa16.89■□□□□ 0.3
PAX6-261ENST00000639943 POLR3GLQ9BT43 218 aa16.89■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms