RNA–Protein interactions for RNA: ENST00000639128.1

RTTN-214, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 4,547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-214ENST00000639128 AEBP1Q8IUX7 1158 aa6.64□□□□□ -1.35
RTTN-214ENST00000639128 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.64□□□□□ -1.35
RTTN-214ENST00000639128 FAM184BQ9ULE4 1060 aa6.64□□□□□ -1.35
RTTN-214ENST00000639128 SH3BGRP55822 239 aaPredicted RBP6.63□□□□□ -1.35
RTTN-214ENST00000639128 RNF168Q8IYW5 571 aaPredicted RBP6.63□□□□□ -1.35
RTTN-214ENST00000639128 TONSLQ96HA7 1378 aa6.63□□□□□ -1.35
RTTN-214ENST00000639128 GOLGA6L9A6NEM1 432 aa6.63□□□□□ -1.35
RTTN-214ENST00000639128 CCDC175P0C221 793 aa6.63□□□□□ -1.35
RTTN-214ENST00000639128 CREBRFQ8IUR6 639 aa6.63□□□□□ -1.35
RTTN-214ENST00000639128 TCHPQ9BT92 498 aa6.63□□□□□ -1.35
RTTN-214ENST00000639128 ATP6V1DQ9Y5K8 247 aa6.63□□□□□ -1.35
RTTN-214ENST00000639128 MRE11P49959 708 aa6.63□□□□□ -1.35
RTTN-214ENST00000639128 DZIP1Q86YF9 867 aaKnown RBP6.62□□□□□ -1.35
RTTN-214ENST00000639128 CCDC39Q9UFE4 941 aa6.62□□□□□ -1.35
RTTN-214ENST00000639128 NF2P35240 595 aa6.62□□□□□ -1.35
RTTN-214ENST00000639128 GTF2A1P52655 376 aaPredicted RBP6.62□□□□□ -1.35
RTTN-214ENST00000639128 LMOD3Q0VAK6 560 aa6.62□□□□□ -1.35
RTTN-214ENST00000639128 FTSJ3Q8IY81 847 aaKnown RBP6.62□□□□□ -1.35
RTTN-214ENST00000639128 KNSTRNQ9Y448 316 aa6.62□□□□□ -1.35
RTTN-214ENST00000639128 MIPOL1Q8TD10 442 aa6.62□□□□□ -1.35
RTTN-214ENST00000639128 ZMYND15Q9H091 742 aa6.62□□□□□ -1.35
RTTN-214ENST00000639128 TSHZ2Q9NRE2 1034 aa6.62□□□□□ -1.35
RTTN-214ENST00000639128 ENOX2Q16206 610 aaKnown RBP6.61□□□□□ -1.35
RTTN-214ENST00000639128 RABEP1Q15276 862 aa6.6□□□□□ -1.35
RTTN-214ENST00000639128 CCAR2Q8N163 923 aaKnown RBP6.6□□□□□ -1.35
RTTN-214ENST00000639128 CLASRPQ8N2M8 674 aaKnown RBP6.6□□□□□ -1.35
RTTN-214ENST00000639128 ERLIN1O75477 346 aa6.6□□□□□ -1.35
RTTN-214ENST00000639128 CCDC173Q0VFZ6 552 aa6.6□□□□□ -1.35
RTTN-214ENST00000639128 DDX10Q13206 875 aaKnown RBP6.6□□□□□ -1.35
RTTN-214ENST00000639128 WDR78Q5VTH9 848 aa6.6□□□□□ -1.35
RTTN-214ENST00000639128 GZF1Q9H116 711 aaPredicted RBP6.6□□□□□ -1.35
RTTN-214ENST00000639128 CT47A1Q5JQC4 288 aaPredicted RBP6.6□□□□□ -1.35
RTTN-214ENST00000639128 CFAP53Q96M91 514 aa6.6□□□□□ -1.35
RTTN-214ENST00000639128 TRIM6-TRIM34B2RNG4 842 aa6.6□□□□□ -1.35
RTTN-214ENST00000639128 GOLIM4O00461 696 aa6.6□□□□□ -1.35
RTTN-214ENST00000639128 KIF3CO14782 793 aa6.6□□□□□ -1.35
RTTN-214ENST00000639128 EZRP15311 586 aaKnown RBP6.6□□□□□ -1.35
RTTN-214ENST00000639128 MICALCLQ6ZW33 695 aa6.6□□□□□ -1.35
RTTN-214ENST00000639128 TRIM34Q9BYJ4 488 aa6.6□□□□□ -1.35
RTTN-214ENST00000639128 ZCCHC6Q5VYS8 1495 aaKnown RBP6.6□□□□□ -1.35
RTTN-214ENST00000639128 PLEKHD1A6NEE1 506 aa6.59□□□□□ -1.35
RTTN-214ENST00000639128 CCDC91Q7Z6B0 441 aa6.59□□□□□ -1.35
RTTN-214ENST00000639128 GPATCH11Q8N954 259 aa6.59□□□□□ -1.35
RTTN-214ENST00000639128 TIGD1Q96MW7 591 aa6.59□□□□□ -1.35
RTTN-214ENST00000639128 LETM1O95202 739 aaPredicted RBP6.59□□□□□ -1.35
RTTN-214ENST00000639128 ZBTB17Q13105 803 aa6.59□□□□□ -1.35
RTTN-214ENST00000639128 ANKRD18AQ8IVF6 992 aa6.59□□□□□ -1.35
RTTN-214ENST00000639128 U2SURPO15042 1029 aaKnown RBP6.58□□□□□ -1.36
RTTN-214ENST00000639128 KCNJ4P48050 445 aa6.58□□□□□ -1.36
RTTN-214ENST00000639128 LUZP1Q86V48 1076 aa6.58□□□□□ -1.36
RTTN-214ENST00000639128 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.58□□□□□ -1.36
RTTN-214ENST00000639128 V9GYY5 206 aaPredicted RBP6.58□□□□□ -1.36
RTTN-214ENST00000639128 BECN2A8MW95 431 aa6.58□□□□□ -1.36
RTTN-214ENST00000639128 ARID4AP29374 1257 aaPredicted RBP6.58□□□□□ -1.36
RTTN-214ENST00000639128 NAP1L1P55209 391 aaKnown RBP6.58□□□□□ -1.36
RTTN-214ENST00000639128 HOMER1Q86YM7 354 aa6.58□□□□□ -1.36
RTTN-214ENST00000639128 IRX6P78412 446 aaPredicted RBP6.58□□□□□ -1.36
RTTN-214ENST00000639128 PRM3Q9NNZ6 103 aa6.58□□□□□ -1.36
RTTN-214ENST00000639128 CT47B1P0C2W7 299 aaPredicted RBP6.57□□□□□ -1.36
RTTN-214ENST00000639128 ANKRD20A12PQ8NF67 263 aa6.57□□□□□ -1.36
RTTN-214ENST00000639128 ZMAT2Q96NC0 199 aaKnown RBP6.57□□□□□ -1.36
RTTN-214ENST00000639128 R3HCC1Q9Y3T6 440 aaKnown RBP6.57□□□□□ -1.36
RTTN-214ENST00000639128 PRPF40AO75400 957 aaKnown RBP6.57□□□□□ -1.36
RTTN-214ENST00000639128 HSPA5P11021 654 aaKnown RBP6.57□□□□□ -1.36
RTTN-214ENST00000639128 RGS3P49796 1198 aa6.57□□□□□ -1.36
RTTN-214ENST00000639128 GIGYF2Q6Y7W6 1299 aaKnown RBP6.57□□□□□ -1.36
RTTN-214ENST00000639128 DAAM2Q86T65 1068 aa6.57□□□□□ -1.36
RTTN-214ENST00000639128 PPM1EQ8WY54 764 aa6.57□□□□□ -1.36
RTTN-214ENST00000639128 NAP1L2Q9ULW6 460 aaPredicted RBP6.57□□□□□ -1.36
RTTN-214ENST00000639128 PAXIP1Q6ZW49 1069 aaPredicted RBP6.57□□□□□ -1.36
RTTN-214ENST00000639128 TSPY4P0CV99 314 aa6.56□□□□□ -1.36
RTTN-214ENST00000639128 TSPY10P0CW01 314 aa6.56□□□□□ -1.36
RTTN-214ENST00000639128 GBP3Q9H0R5 595 aa6.56□□□□□ -1.36
RTTN-214ENST00000639128 DDX49Q9Y6V7 483 aaKnown RBP6.56□□□□□ -1.36
RTTN-214ENST00000639128 SALL2Q9Y467 1007 aaPredicted RBP6.56□□□□□ -1.36
RTTN-214ENST00000639128 AKAP17AQ02040 695 aaKnown RBP6.55□□□□□ -1.36
RTTN-214ENST00000639128 DNAAF4Q8WXU2 420 aa6.55□□□□□ -1.36
RTTN-214ENST00000639128 ZNHIT6Q9NWK9 470 aaKnown RBP6.55□□□□□ -1.36
RTTN-214ENST00000639128 A0A1B0GUA9 196 aa6.55□□□□□ -1.36
RTTN-214ENST00000639128 KIF3BO15066 747 aa6.55□□□□□ -1.36
RTTN-214ENST00000639128 NPHP1O15259 732 aa6.55□□□□□ -1.36
RTTN-214ENST00000639128 ERLIN2O94905 339 aa6.55□□□□□ -1.36
RTTN-214ENST00000639128 RBM10P98175 930 aaKnown RBP6.55□□□□□ -1.36
RTTN-214ENST00000639128 ZNF592Q92610 1267 aa6.55□□□□□ -1.36
RTTN-214ENST00000639128 GTPBP4Q9BZE4 634 aaKnown RBP6.55□□□□□ -1.36
RTTN-214ENST00000639128 IPO4Q8TEX9 1081 aaKnown RBP6.55□□□□□ -1.36
RTTN-214ENST00000639128 FEZ1Q99689 392 aa6.55□□□□□ -1.36
RTTN-214ENST00000639128 SLC26A8Q96RN1 970 aa6.54□□□□□ -1.36
RTTN-214ENST00000639128 SMC1AQ14683 1233 aaKnown RBP6.54□□□□□ -1.36
RTTN-214ENST00000639128 KIF2AO00139 706 aaPredicted RBP6.54□□□□□ -1.36
RTTN-214ENST00000639128 CCDC146Q8IYE0 955 aa6.54□□□□□ -1.36
RTTN-214ENST00000639128 CGNQ9P2M7 1197 aaKnown RBP6.54□□□□□ -1.36
RTTN-214ENST00000639128 KIAA1211Q6ZU35 1233 aa6.53□□□□□ -1.36
RTTN-214ENST00000639128 SLKQ9H2G2 1235 aaPredicted RBP6.53□□□□□ -1.36
RTTN-214ENST00000639128 ST18O60284 1047 aa6.53□□□□□ -1.36
RTTN-214ENST00000639128 PPFIBP2Q8ND30 876 aa6.53□□□□□ -1.36
RTTN-214ENST00000639128 PMFBP1Q8TBY8 1022 aa6.53□□□□□ -1.36
RTTN-214ENST00000639128 SH2D4BQ5SQS7 431 aa6.53□□□□□ -1.36
RTTN-214ENST00000639128 MNAT1P51948 309 aa6.53□□□□□ -1.36
RTTN-214ENST00000639128 CCER2I3L3R5 266 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 141 ms