RNA–Protein interactions for RNA: ENST00000638155.1

UBE3A-228, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 9,131 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-228ENST00000638155 MTERF4Q7Z6M4 381 aaKnown RBP16.13■□□□□ 0.17
UBE3A-228ENST00000638155 HDAC5Q9UQL6 1122 aa16.13■□□□□ 0.17
UBE3A-228ENST00000638155 AKAP17AQ02040 695 aaKnown RBP16.13■□□□□ 0.17
UBE3A-228ENST00000638155 RSF1Q96T23 1441 aaPredicted RBP16.13■□□□□ 0.17
UBE3A-228ENST00000638155 NAP1L1P55209 391 aaKnown RBP16.13■□□□□ 0.17
UBE3A-228ENST00000638155 DYDC1Q8WWB3 177 aa16.12■□□□□ 0.17
UBE3A-228ENST00000638155 INCENPQ9NQS7 918 aa16.12■□□□□ 0.17
UBE3A-228ENST00000638155 CCDC9Q9Y3X0 531 aaKnown RBP16.12■□□□□ 0.17
UBE3A-228ENST00000638155 CHMP4AQ9BY43 222 aa16.12■□□□□ 0.17
UBE3A-228ENST00000638155 CCDC173Q0VFZ6 552 aa16.12■□□□□ 0.17
UBE3A-228ENST00000638155 FOXD4L5Q5VV16 416 aaPredicted RBP16.12■□□□□ 0.17
UBE3A-228ENST00000638155 FOXD4L4Q8WXT5 416 aaPredicted RBP16.12■□□□□ 0.17
UBE3A-228ENST00000638155 TOMM22Q9NS69 142 aa16.11■□□□□ 0.17
UBE3A-228ENST00000638155 MNS1Q8NEH6 495 aa16.1■□□□□ 0.17
UBE3A-228ENST00000638155 FAM184AQ8NB25 1140 aa16.1■□□□□ 0.17
UBE3A-228ENST00000638155 TIMELESSQ9UNS1 1208 aa16.1■□□□□ 0.17
UBE3A-228ENST00000638155 ZNF330Q9Y3S2 320 aaPredicted RBP16.1■□□□□ 0.17
UBE3A-228ENST00000638155 CCDC47Q96A33 483 aaKnown RBP16.1■□□□□ 0.17
UBE3A-228ENST00000638155 KAT6BQ8WYB5 2073 aa16.09■□□□□ 0.17
UBE3A-228ENST00000638155 HSP90AB2PQ58FF8 381 aa16.09■□□□□ 0.17
UBE3A-228ENST00000638155 ERCC4Q92889 916 aaPredicted RBP16.09■□□□□ 0.17
UBE3A-228ENST00000638155 DDX49Q9Y6V7 483 aaKnown RBP16.09■□□□□ 0.17
UBE3A-228ENST00000638155 NEFHP12036 1026 aa16.08■□□□□ 0.17
UBE3A-228ENST00000638155 LEKR1Q6ZMV7 388 aa16.08■□□□□ 0.16
UBE3A-228ENST00000638155 GOLGA6L7A0A1B0GV03 622 aa16.07■□□□□ 0.16
UBE3A-228ENST00000638155 SPAG9O60271 1321 aaKnown RBP16.07■□□□□ 0.16
UBE3A-228ENST00000638155 CAGE1Q8TC20 777 aa16.07■□□□□ 0.16
UBE3A-228ENST00000638155 TMF1P82094 1093 aa16.07■□□□□ 0.16
UBE3A-228ENST00000638155 MORC1Q86VD1 984 aa16.07■□□□□ 0.16
UBE3A-228ENST00000638155 GSE1Q14687 1217 aa16.07■□□□□ 0.16
UBE3A-228ENST00000638155 TSPYL1Q9H0U9 437 aa16.06■□□□□ 0.16
UBE3A-228ENST00000638155 MCTP1Q6DN14 999 aa16.06■□□□□ 0.16
UBE3A-228ENST00000638155 STK31Q9BXU1 1019 aa16.05■□□□□ 0.16
UBE3A-228ENST00000638155 KTN1Q86UP2 1357 aaKnown RBP16.05■□□□□ 0.16
UBE3A-228ENST00000638155 SOX12O15370 315 aa16.04■□□□□ 0.16
UBE3A-228ENST00000638155 RCAN3Q9UKA8 241 aa16.04■□□□□ 0.16
UBE3A-228ENST00000638155 IFT57Q9NWB7 429 aa16.04■□□□□ 0.16
UBE3A-228ENST00000638155 PKNOX2Q96KN3 472 aa16.04■□□□□ 0.16
UBE3A-228ENST00000638155 EPS15P42566 896 aa16.04■□□□□ 0.16
UBE3A-228ENST00000638155 FRAT2O75474 233 aaPredicted RBP16.03■□□□□ 0.16
UBE3A-228ENST00000638155 TRIM29Q14134 588 aa16.03■□□□□ 0.16
UBE3A-228ENST00000638155 KIAA0754O94854 1291 aa16.02■□□□□ 0.16
UBE3A-228ENST00000638155 FAM43AQ8N2R8 423 aa16.02■□□□□ 0.16
UBE3A-228ENST00000638155 CCDC43Q96MW1 224 aaKnown RBP16.02■□□□□ 0.16
UBE3A-228ENST00000638155 PLEKHD1A6NEE1 506 aa16.02■□□□□ 0.16
UBE3A-228ENST00000638155 SYNE3Q6ZMZ3 975 aa16.01■□□□□ 0.15
UBE3A-228ENST00000638155 SRPK2P78362 688 aaKnown RBP16.01■□□□□ 0.15
UBE3A-228ENST00000638155 DIAPH3Q9NSV4 1193 aa16.01■□□□□ 0.15
UBE3A-228ENST00000638155 ERCC6Q03468 1493 aa16.01■□□□□ 0.15
UBE3A-228ENST00000638155 CSB-PGBD3P0DP91 1061 aa16.01■□□□□ 0.15
UBE3A-228ENST00000638155 PODXL2Q9NZ53 605 aa16.01■□□□□ 0.15
UBE3A-228ENST00000638155 CLIP1P30622 1438 aa16■□□□□ 0.15
UBE3A-228ENST00000638155 ANKRD18AQ8IVF6 992 aa16■□□□□ 0.15
UBE3A-228ENST00000638155 GOLGA6L10A6NI86 522 aa16■□□□□ 0.15
UBE3A-228ENST00000638155 KANK1Q14678 1352 aa15.99■□□□□ 0.15
UBE3A-228ENST00000638155 CWC22Q9HCG8 908 aaKnown RBP15.99■□□□□ 0.15
UBE3A-228ENST00000638155 CTDP1Q9Y5B0 961 aaPredicted RBP15.99■□□□□ 0.15
UBE3A-228ENST00000638155 ZFYVE27Q5T4F4 411 aa15.99■□□□□ 0.15
UBE3A-228ENST00000638155 AEBP2Q6ZN18 517 aaPredicted RBP15.99■□□□□ 0.15
UBE3A-228ENST00000638155 AMOTL1Q8IY63 956 aa15.99■□□□□ 0.15
UBE3A-228ENST00000638155 TRIM34Q9BYJ4 488 aa15.99■□□□□ 0.15
UBE3A-228ENST00000638155 CLASRPQ8N2M8 674 aaKnown RBP15.99■□□□□ 0.15
UBE3A-228ENST00000638155 FOXD4L6Q3SYB3 417 aaPredicted RBP15.98■□□□□ 0.15
UBE3A-228ENST00000638155 FOXD4L3Q6VB84 417 aaPredicted RBP15.98■□□□□ 0.15
UBE3A-228ENST00000638155 ENOX2Q16206 610 aaKnown RBP15.97■□□□□ 0.15
UBE3A-228ENST00000638155 AXDND1Q5T1B0 1012 aaPredicted RBP15.97■□□□□ 0.15
UBE3A-228ENST00000638155 TAF3Q5VWG9 929 aa15.97■□□□□ 0.15
UBE3A-228ENST00000638155 NAT10Q9H0A0 1025 aaKnown RBP15.97■□□□□ 0.15
UBE3A-228ENST00000638155 LRRFIP1Q32MZ4 808 aaKnown RBP15.97■□□□□ 0.15
UBE3A-228ENST00000638155 SMC4Q9NTJ3 1288 aa15.97■□□□□ 0.15
UBE3A-228ENST00000638155 EZRP15311 586 aaKnown RBP15.97■□□□□ 0.15
UBE3A-228ENST00000638155 SEPT7Q16181 437 aaKnown RBP15.97■□□□□ 0.15
UBE3A-228ENST00000638155 ZCCHC6Q5VYS8 1495 aaKnown RBP15.96■□□□□ 0.15
UBE3A-228ENST00000638155 SCRIBQ14160 1630 aa15.96■□□□□ 0.15
UBE3A-228ENST00000638155 USP8P40818 1118 aa15.96■□□□□ 0.15
UBE3A-228ENST00000638155 PAK3O75914 559 aaPredicted RBP15.96■□□□□ 0.15
UBE3A-228ENST00000638155 ERLIN2O94905 339 aa15.96■□□□□ 0.14
UBE3A-228ENST00000638155 CPLX2Q6PUV4 134 aaKnown RBP15.95■□□□□ 0.14
UBE3A-228ENST00000638155 SASS6Q6UVJ0 657 aa15.95■□□□□ 0.14
UBE3A-228ENST00000638155 BICD2Q8TD16 824 aa15.94■□□□□ 0.14
UBE3A-228ENST00000638155 CT47B1P0C2W7 299 aaPredicted RBP15.94■□□□□ 0.14
UBE3A-228ENST00000638155 OFD1O75665 1012 aa15.94■□□□□ 0.14
UBE3A-228ENST00000638155 CCER2I3L3R5 266 aa15.93■□□□□ 0.14
UBE3A-228ENST00000638155 R3HCC1Q9Y3T6 440 aaKnown RBP15.93■□□□□ 0.14
UBE3A-228ENST00000638155 NOL10Q9BSC4 688 aaKnown RBP15.93■□□□□ 0.14
UBE3A-228ENST00000638155 GTF2E1P29083 439 aaPredicted RBP15.93■□□□□ 0.14
UBE3A-228ENST00000638155 DEF6Q9H4E7 631 aa15.93■□□□□ 0.14
UBE3A-228ENST00000638155 CCP110O43303 1012 aa15.92■□□□□ 0.14
UBE3A-228ENST00000638155 SKIDA1Q1XH10 827 aa15.92■□□□□ 0.14
UBE3A-228ENST00000638155 HDGFL2Q7Z4V5 671 aaPredicted RBP15.92■□□□□ 0.14
UBE3A-228ENST00000638155 CCDC39Q9UFE4 941 aa15.92■□□□□ 0.14
UBE3A-228ENST00000638155 CGNL1Q0VF96 1302 aa15.92■□□□□ 0.14
UBE3A-228ENST00000638155 GIMAP7Q8NHV1 300 aa15.92■□□□□ 0.14
UBE3A-228ENST00000638155 CCAR1Q8IX12 1150 aaKnown RBP15.91■□□□□ 0.14
UBE3A-228ENST00000638155 RAD21O60216 631 aa15.91■□□□□ 0.14
UBE3A-228ENST00000638155 SLC4A10Q6U841 1118 aa15.91■□□□□ 0.14
UBE3A-228ENST00000638155 PAF1Q8N7H5 531 aa15.91■□□□□ 0.14
UBE3A-228ENST00000638155 ANKRD62A6NC57 917 aa15.91■□□□□ 0.14
UBE3A-228ENST00000638155 OLFM4Q6UX06 510 aa15.9■□□□□ 0.14
UBE3A-228ENST00000638155 CPLX1O14810 134 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 255.9 ms