RNA–Protein interactions for RNA: ENST00000637881.1

CDKL5-211, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 1,782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-211ENST00000637881 PRDM4Q9UKN5 801 aa10.41□□□□□ -0.74
CDKL5-211ENST00000637881 ABCC10Q5T3U5 1492 aa10.41□□□□□ -0.74
CDKL5-211ENST00000637881 SMG6Q86US8 1419 aaKnown RBP10.41□□□□□ -0.74
CDKL5-211ENST00000637881 MAP3K1Q13233 1512 aa10.4□□□□□ -0.74
CDKL5-211ENST00000637881 ZNF326Q5BKZ1 582 aaKnown RBP10.4□□□□□ -0.74
CDKL5-211ENST00000637881 PNNQ9H307 717 aaKnown RBP10.4□□□□□ -0.74
CDKL5-211ENST00000637881 NCOA2Q15596 1464 aa10.4□□□□□ -0.74
CDKL5-211ENST00000637881 CFAP43Q8NDM7 1665 aa10.4□□□□□ -0.74
CDKL5-211ENST00000637881 EHBP1L1Q8N3D4 1523 aa10.4□□□□□ -0.75
CDKL5-211ENST00000637881 NAP1L5Q96NT1 182 aaPredicted RBP10.39□□□□□ -0.75
CDKL5-211ENST00000637881 ZNF644Q9H582 1327 aaPredicted RBP10.39□□□□□ -0.75
CDKL5-211ENST00000637881 TPM2P07951 284 aa10.39□□□□□ -0.75
CDKL5-211ENST00000637881 RRAGDQ9NQL2 400 aaPredicted RBP10.39□□□□□ -0.75
CDKL5-211ENST00000637881 PHLDB1Q86UU1 1377 aa10.38□□□□□ -0.75
CDKL5-211ENST00000637881 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.38□□□□□ -0.75
CDKL5-211ENST00000637881 EFCAB2Q5VUJ9 269 aa10.38□□□□□ -0.75
CDKL5-211ENST00000637881 BCL11BQ9C0K0 894 aaPredicted RBP10.38□□□□□ -0.75
CDKL5-211ENST00000637881 KIF13AQ9H1H9 1805 aa10.37□□□□□ -0.75
CDKL5-211ENST00000637881 DIP2BQ9P265 1576 aa10.37□□□□□ -0.75
CDKL5-211ENST00000637881 HNRNPMP52272 730 aaKnown RBP eCLIP10.37□□□□□ -0.75
CDKL5-211ENST00000637881 TSPOAP1O95153 1857 aa10.36□□□□□ -0.75
CDKL5-211ENST00000637881 TTC37Q6PGP7 1564 aa10.36□□□□□ -0.75
CDKL5-211ENST00000637881 SUPT6HQ7KZ85 1726 aaKnown RBP10.36□□□□□ -0.75
CDKL5-211ENST00000637881 NCLP19338 710 aaKnown RBP10.36□□□□□ -0.75
CDKL5-211ENST00000637881 DCAF11Q8TEB1 546 aa10.35□□□□□ -0.75
CDKL5-211ENST00000637881 BACH2Q9BYV9 841 aa10.35□□□□□ -0.75
CDKL5-211ENST00000637881 ARHGAP5Q13017 1502 aa10.35□□□□□ -0.75
CDKL5-211ENST00000637881 GPATCH8Q9UKJ3 1502 aaKnown RBP10.35□□□□□ -0.75
CDKL5-211ENST00000637881 PLCH2O75038 1416 aa10.34□□□□□ -0.75
CDKL5-211ENST00000637881 NPM3O75607 178 aaKnown RBP10.34□□□□□ -0.75
CDKL5-211ENST00000637881 ARXQ96QS3 562 aa10.34□□□□□ -0.75
CDKL5-211ENST00000637881 MAP7D2Q96T17 732 aa10.34□□□□□ -0.75
CDKL5-211ENST00000637881 RAPGEF3O95398 923 aa10.33□□□□□ -0.76
CDKL5-211ENST00000637881 PDE4AP27815 886 aa10.33□□□□□ -0.76
CDKL5-211ENST00000637881 MYOM3Q5VTT5 1437 aa10.33□□□□□ -0.76
CDKL5-211ENST00000637881 CHIC2Q9UKJ5 165 aa10.32□□□□□ -0.76
CDKL5-211ENST00000637881 POLR1AO95602 1720 aaPredicted RBP10.32□□□□□ -0.76
CDKL5-211ENST00000637881 FANCAO15360 1455 aa10.32□□□□□ -0.76
CDKL5-211ENST00000637881 ABCA9Q8IUA7 1624 aa10.32□□□□□ -0.76
CDKL5-211ENST00000637881 GLI2P10070 1586 aa10.32□□□□□ -0.76
CDKL5-211ENST00000637881 AFAP1Q8N556 730 aa10.31□□□□□ -0.76
CDKL5-211ENST00000637881 DISP3Q9P2K9 1392 aa10.31□□□□□ -0.76
CDKL5-211ENST00000637881 RNF216Q9NWF9 866 aaPredicted RBP10.31□□□□□ -0.76
CDKL5-211ENST00000637881 AKNAQ7Z591 1439 aa10.3□□□□□ -0.76
CDKL5-211ENST00000637881 RSPH4AQ5TD94 716 aa10.3□□□□□ -0.76
CDKL5-211ENST00000637881 SMAP1Q8IYB5 467 aaPredicted RBP10.3□□□□□ -0.76
CDKL5-211ENST00000637881 FGD6Q6ZV73 1430 aa10.3□□□□□ -0.76
CDKL5-211ENST00000637881 SCAPERQ9BY12 1400 aa10.3□□□□□ -0.76
CDKL5-211ENST00000637881 VIRMAQ69YN4 1812 aaKnown RBP10.29□□□□□ -0.76
CDKL5-211ENST00000637881 MAP3K4Q9Y6R4 1608 aa10.29□□□□□ -0.76
CDKL5-211ENST00000637881 RAB3GAP2Q9H2M9 1393 aa10.29□□□□□ -0.76
CDKL5-211ENST00000637881 NPM2Q86SE8 214 aaKnown RBP10.29□□□□□ -0.76
CDKL5-211ENST00000637881 CDC42BPAQ5VT25 1732 aa10.28□□□□□ -0.76
CDKL5-211ENST00000637881 MYO5CQ9NQX4 1742 aa10.28□□□□□ -0.76
CDKL5-211ENST00000637881 TSPY4P0CV99 314 aa10.28□□□□□ -0.76
CDKL5-211ENST00000637881 TSPY10P0CW01 314 aa10.28□□□□□ -0.76
CDKL5-211ENST00000637881 HOXD11P31277 338 aaPredicted RBP10.28□□□□□ -0.76
CDKL5-211ENST00000637881 IPO4Q8TEX9 1081 aaKnown RBP10.28□□□□□ -0.76
CDKL5-211ENST00000637881 CNTLNQ9NXG0 1405 aa10.28□□□□□ -0.76
CDKL5-211ENST00000637881 TEX14Q8IWB6 1497 aa10.28□□□□□ -0.76
CDKL5-211ENST00000637881 CDC42BPBQ9Y5S2 1711 aa10.27□□□□□ -0.76
CDKL5-211ENST00000637881 SETD5Q9C0A6 1442 aa10.27□□□□□ -0.77
CDKL5-211ENST00000637881 ADGRL1O94910 1474 aa10.27□□□□□ -0.77
CDKL5-211ENST00000637881 TERF1P54274 439 aa10.26□□□□□ -0.77
CDKL5-211ENST00000637881 UTP14CQ5TAP6 766 aaKnown RBP10.26□□□□□ -0.77
CDKL5-211ENST00000637881 NUDCQ9Y266 331 aa10.26□□□□□ -0.77
CDKL5-211ENST00000637881 MIA2Q96PC5 1412 aa10.26□□□□□ -0.77
CDKL5-211ENST00000637881 CAMSAP2Q08AD1 1489 aa10.26□□□□□ -0.77
CDKL5-211ENST00000637881 PREX2Q70Z35 1606 aa10.26□□□□□ -0.77
CDKL5-211ENST00000637881 NAP1L2Q9ULW6 460 aaPredicted RBP10.26□□□□□ -0.77
CDKL5-211ENST00000637881 KDM6BO15054 1643 aa10.25□□□□□ -0.77
CDKL5-211ENST00000637881 TRAPPC8Q9Y2L5 1435 aa10.25□□□□□ -0.77
CDKL5-211ENST00000637881 ITSN2Q9NZM3 1697 aa10.25□□□□□ -0.77
CDKL5-211ENST00000637881 PTPN23Q9H3S7 1636 aa10.25□□□□□ -0.77
CDKL5-211ENST00000637881 SPAG9O60271 1321 aaKnown RBP10.24□□□□□ -0.77
CDKL5-211ENST00000637881 CANXP27824 592 aaKnown RBP10.24□□□□□ -0.77
CDKL5-211ENST00000637881 MTERF4Q7Z6M4 381 aaKnown RBP10.24□□□□□ -0.77
CDKL5-211ENST00000637881 RRP7BPQ9NSQ0 103 aa10.24□□□□□ -0.77
CDKL5-211ENST00000637881 SAMD9LQ8IVG5 1584 aa10.24□□□□□ -0.77
CDKL5-211ENST00000637881 ARHGEF12Q9NZN5 1544 aa10.24□□□□□ -0.77
CDKL5-211ENST00000637881 NEO1Q92859 1461 aa10.24□□□□□ -0.77
CDKL5-211ENST00000637881 COL17A1Q9UMD9 1497 aaPredicted RBP10.24□□□□□ -0.77
CDKL5-211ENST00000637881 PPRC1Q5VV67 1664 aaKnown RBP10.24□□□□□ -0.77
CDKL5-211ENST00000637881 SYCP2Q9BX26 1530 aa10.23□□□□□ -0.77
CDKL5-211ENST00000637881 DENND4BO75064 1496 aaPredicted RBP10.23□□□□□ -0.77
CDKL5-211ENST00000637881 RGS3P49796 1198 aa10.23□□□□□ -0.77
CDKL5-211ENST00000637881 CNGB1Q14028 1251 aaPredicted RBP10.23□□□□□ -0.77
CDKL5-211ENST00000637881 BBXQ8WY36 941 aaPredicted RBP10.23□□□□□ -0.77
CDKL5-211ENST00000637881 GTF2E1P29083 439 aaPredicted RBP10.22□□□□□ -0.77
CDKL5-211ENST00000637881 PLEKHH2Q8IVE3 1493 aa10.21□□□□□ -0.77
CDKL5-211ENST00000637881 ARAP3Q8WWN8 1544 aa10.21□□□□□ -0.78
CDKL5-211ENST00000637881 FRAT2O75474 233 aaPredicted RBP10.21□□□□□ -0.78
CDKL5-211ENST00000637881 ISY1Q9ULR0 285 aaKnown RBP10.21□□□□□ -0.78
CDKL5-211ENST00000637881 KIAA1107Q9UPP5 1409 aa10.21□□□□□ -0.78
CDKL5-211ENST00000637881 MBD5Q9P267 1494 aa10.2□□□□□ -0.78
CDKL5-211ENST00000637881 ABCC5O15440 1437 aa10.2□□□□□ -0.78
CDKL5-211ENST00000637881 ABCC1P33527 1531 aa10.2□□□□□ -0.78
CDKL5-211ENST00000637881 TCOF1Q13428 1488 aaKnown RBP10.2□□□□□ -0.78
CDKL5-211ENST00000637881 CFAP74Q9C0B2 1584 aa10.19□□□□□ -0.78
CDKL5-211ENST00000637881 DAPK1P53355 1430 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms