RNA–Protein interactions for RNA: ENST00000637789.1

CHD2-229, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-229ENST00000637789 UGGT1Q9NYU2 1555 aa16.8■□□□□ 0.28
CHD2-229ENST00000637789 RXRBP28702 533 aa16.79■□□□□ 0.28
CHD2-229ENST00000637789 SETBP1Q9Y6X0 1596 aa16.79■□□□□ 0.28
CHD2-229ENST00000637789 FAM135AQ9P2D6 1515 aa16.79■□□□□ 0.28
CHD2-229ENST00000637789 A2MP01023 1474 aa16.79■□□□□ 0.28
CHD2-229ENST00000637789 JCADQ9P266 1359 aa16.78■□□□□ 0.28
CHD2-229ENST00000637789 LRP6O75581 1613 aa16.78■□□□□ 0.28
CHD2-229ENST00000637789 ATP1B4Q9UN42 357 aaPredicted RBP16.78■□□□□ 0.28
CHD2-229ENST00000637789 CDK12Q9NYV4 1490 aaPredicted RBP16.78■□□□□ 0.28
CHD2-229ENST00000637789 SPAG9O60271 1321 aaKnown RBP16.77■□□□□ 0.28
CHD2-229ENST00000637789 ZC3H13Q5T200 1668 aaKnown RBP16.77■□□□□ 0.28
CHD2-229ENST00000637789 ZRANB1Q9UGI0 708 aa16.76■□□□□ 0.27
CHD2-229ENST00000637789 CLIP1P30622 1438 aa16.76■□□□□ 0.27
CHD2-229ENST00000637789 ATP7AQ04656 1500 aa16.75■□□□□ 0.27
CHD2-229ENST00000637789 NLRP1Q9C000 1473 aa16.74■□□□□ 0.27
CHD2-229ENST00000637789 PHLPP1O60346 1717 aa16.74■□□□□ 0.27
CHD2-229ENST00000637789 MEX3CQ5U5Q3 659 aaKnown RBP16.74■□□□□ 0.27
CHD2-229ENST00000637789 PZPP20742 1482 aa16.73■□□□□ 0.27
CHD2-229ENST00000637789 KDM5DQ9BY66 1539 aa16.72■□□□□ 0.27
CHD2-229ENST00000637789 MIA2Q96PC5 1412 aa16.71■□□□□ 0.27
CHD2-229ENST00000637789 INO80Q9ULG1 1556 aaPredicted RBP16.71■□□□□ 0.27
CHD2-229ENST00000637789 SYCP2Q9BX26 1530 aa16.7■□□□□ 0.26
CHD2-229ENST00000637789 RBM33Q96EV2 1170 aaKnown RBP16.69■□□□□ 0.26
CHD2-229ENST00000637789 SPATA31A6Q5VVP1 1343 aa16.69■□□□□ 0.26
CHD2-229ENST00000637789 LRRC9Q6ZRR7 1453 aa16.68■□□□□ 0.26
CHD2-229ENST00000637789 FOXD1Q16676 465 aa16.68■□□□□ 0.26
CHD2-229ENST00000637789 TMEM94Q12767 1356 aa16.67■□□□□ 0.26
CHD2-229ENST00000637789 HNRNPMP52272 730 aaKnown RBP eCLIP16.67■□□□□ 0.262e-6■■□□□ 13.5
CHD2-229ENST00000637789 ZNF777Q9ULD5 760 aaPredicted RBP16.67■□□□□ 0.26
CHD2-229ENST00000637789 RGS12O14924 1447 aa16.67■□□□□ 0.26
CHD2-229ENST00000637789 COL16A1Q07092 1604 aaPredicted RBP16.67■□□□□ 0.26
CHD2-229ENST00000637789 CDC42BPAQ5VT25 1732 aa16.66■□□□□ 0.26
CHD2-229ENST00000637789 MAP3K1Q13233 1512 aa16.65■□□□□ 0.26
CHD2-229ENST00000637789 NUTM2BA6NNL0 878 aaPredicted RBP16.64■□□□□ 0.25
CHD2-229ENST00000637789 NUTM2EB1AL46 878 aaPredicted RBP16.64■□□□□ 0.25
CHD2-229ENST00000637789 NUTM2DQ5VT03 806 aaPredicted RBP16.64■□□□□ 0.25
CHD2-229ENST00000637789 NUTM2AQ8IVF1 878 aaPredicted RBP16.64■□□□□ 0.25
CHD2-229ENST00000637789 ADGBQ8N7X0 1667 aa16.64■□□□□ 0.25
CHD2-229ENST00000637789 CSRNP3Q8WYN3 585 aa16.62■□□□□ 0.25
CHD2-229ENST00000637789 FGD6Q6ZV73 1430 aa16.62■□□□□ 0.25
CHD2-229ENST00000637789 SCAF11Q99590 1463 aaKnown RBP16.61■□□□□ 0.25
CHD2-229ENST00000637789 LRRIQ1Q96JM4 1722 aa16.61■□□□□ 0.25
CHD2-229ENST00000637789 FMN1Q68DA7 1419 aa16.6■□□□□ 0.25
CHD2-229ENST00000637789 SLAIN2Q9P270 581 aa16.59■□□□□ 0.25
CHD2-229ENST00000637789 LTKP29376 864 aa16.58■□□□□ 0.24
CHD2-229ENST00000637789 AFF2P51816 1311 aa16.58■□□□□ 0.24
CHD2-229ENST00000637789 WASHC2CQ9Y4E1 1318 aa16.58■□□□□ 0.24
CHD2-229ENST00000637789 ATAD2Q6PL18 1390 aa16.58■□□□□ 0.24
CHD2-229ENST00000637789 SHPRHQ149N8 1683 aa16.57■□□□□ 0.24
CHD2-229ENST00000637789 IFFO2Q5TF58 517 aa16.57■□□□□ 0.24
CHD2-229ENST00000637789 PROSER2Q86WR7 435 aaPredicted RBP16.56■□□□□ 0.24
CHD2-229ENST00000637789 KIAA1107Q9UPP5 1409 aa16.55■□□□□ 0.24
CHD2-229ENST00000637789 RBM6P78332 1123 aaKnown RBP16.55■□□□□ 0.24
CHD2-229ENST00000637789 TXNDC2Q86VQ3 553 aa16.55■□□□□ 0.24
CHD2-229ENST00000637789 DHX29Q7Z478 1369 aaKnown RBP16.54■□□□□ 0.24
CHD2-229ENST00000637789 UBR1Q8IWV7 1749 aa16.54■□□□□ 0.24
CHD2-229ENST00000637789 KIF3BO15066 747 aa16.54■□□□□ 0.24
CHD2-229ENST00000637789 LRP5O75197 1615 aa16.53■□□□□ 0.24
CHD2-229ENST00000637789 TIAM1Q13009 1591 aa16.53■□□□□ 0.24
CHD2-229ENST00000637789 ARHGAP23Q9P227 1491 aa16.53■□□□□ 0.24
CHD2-229ENST00000637789 MSH6P52701 1360 aa16.52■□□□□ 0.24
CHD2-229ENST00000637789 PRDM15P57071 1507 aaPredicted RBP16.52■□□□□ 0.24
CHD2-229ENST00000637789 KCNA6P17658 529 aa16.52■□□□□ 0.24
CHD2-229ENST00000637789 QTRT2Q9H974 415 aaKnown RBP16.52■□□□□ 0.24
CHD2-229ENST00000637789 GPATCH8Q9UKJ3 1502 aaKnown RBP16.51■□□□□ 0.23
CHD2-229ENST00000637789 NCOA2Q15596 1464 aa16.51■□□□□ 0.23
CHD2-229ENST00000637789 PLEKHH2Q8IVE3 1493 aa16.51■□□□□ 0.23
CHD2-229ENST00000637789 SLIT1O75093 1534 aa16.5■□□□□ 0.23
CHD2-229ENST00000637789 CHIC1Q5VXU3 224 aa16.49■□□□□ 0.23
CHD2-229ENST00000637789 AHDC1Q5TGY3 1603 aaPredicted RBP16.48■□□□□ 0.23
CHD2-229ENST00000637789 ERVK-7P63135 1459 aa16.47■□□□□ 0.23
CHD2-229ENST00000637789 EP400Q96L91 3159 aa16.46■□□□□ 0.22
CHD2-229ENST00000637789 ABCC3O15438 1527 aa16.45■□□□□ 0.22
CHD2-229ENST00000637789 EID1Q9Y6B2 187 aa16.45■□□□□ 0.22
CHD2-229ENST00000637789 NKTRP30414 1462 aaKnown RBP16.45■□□□□ 0.22
CHD2-229ENST00000637789 DIP2AQ14689 1571 aa16.45■□□□□ 0.22
CHD2-229ENST00000637789 ARHGAP35Q9NRY4 1499 aa16.44■□□□□ 0.22
CHD2-229ENST00000637789 NGLY1Q96IV0 654 aa16.44■□□□□ 0.22
CHD2-229ENST00000637789 RTEL1-TNFRSF6BF6WH68 1400 aa16.44■□□□□ 0.22
CHD2-229ENST00000637789 CCDC125Q86Z20 511 aa16.43■□□□□ 0.22
CHD2-229ENST00000637789 C8orf37Q96NL8 207 aa16.43■□□□□ 0.22
CHD2-229ENST00000637789 CFDP1Q9UEE9 299 aaPredicted RBP16.43■□□□□ 0.22
CHD2-229ENST00000637789 KDM5AP29375 1690 aaKnown RBP16.43■□□□□ 0.22
CHD2-229ENST00000637789 NWD1Q149M9 1564 aa16.43■□□□□ 0.22
CHD2-229ENST00000637789 SLC26A8Q96RN1 970 aa16.42■□□□□ 0.22
CHD2-229ENST00000637789 CCDC18Q5T9S5 1454 aa16.41■□□□□ 0.22
CHD2-229ENST00000637789 YY1P25490 414 aa16.4■□□□□ 0.22
CHD2-229ENST00000637789 TET3O43151 1660 aa16.38■□□□□ 0.21
CHD2-229ENST00000637789 MBD5Q9P267 1494 aa16.38■□□□□ 0.21
CHD2-229ENST00000637789 TMEM2Q9UHN6 1383 aa16.38■□□□□ 0.21
CHD2-229ENST00000637789 ZNF644Q9H582 1327 aaPredicted RBP16.37■□□□□ 0.21
CHD2-229ENST00000637789 NHSL1Q5SYE7 1610 aa16.35■□□□□ 0.21
CHD2-229ENST00000637789 MAST1Q9Y2H9 1570 aa16.34■□□□□ 0.21
CHD2-229ENST00000637789 CFAP65Q6ZU64 1925 aaKnown RBP16.33■□□□□ 0.21
CHD2-229ENST00000637789 CCNB3Q8WWL7 1395 aa16.33■□□□□ 0.2
CHD2-229ENST00000637789 CAMSAP2Q08AD1 1489 aa16.33■□□□□ 0.2
CHD2-229ENST00000637789 PIK3C2BO00750 1634 aa16.31■□□□□ 0.2
CHD2-229ENST00000637789 SETD5Q9C0A6 1442 aa16.31■□□□□ 0.2
CHD2-229ENST00000637789 CASKIN1Q8WXD9 1431 aa16.3■□□□□ 0.2
CHD2-229ENST00000637789 BRINP3Q76B58 766 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms