RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 MAST1Q9Y2H9 1570 aa31.52■■■□□ 2.64
CLN6-222ENST00000637667 WASHC2CQ9Y4E1 1318 aa31.51■■■□□ 2.64
CLN6-222ENST00000637667 KDM5DQ9BY66 1539 aa31.51■■■□□ 2.63
CLN6-222ENST00000637667 CEP170BQ9Y4F5 1589 aaPredicted RBP31.49■■■□□ 2.63
CLN6-222ENST00000637667 ZNF142P52746 1687 aaPredicted RBP31.48■■■□□ 2.63
CLN6-222ENST00000637667 FBXO31Q5XUX0 539 aaPredicted RBP31.47■■■□□ 2.63
CLN6-222ENST00000637667 NCKAP5LQ9HCH0 1330 aa31.47■■■□□ 2.63
CLN6-222ENST00000637667 PZPP20742 1482 aa31.46■■■□□ 2.63
CLN6-222ENST00000637667 PLA2R1Q13018 1463 aa31.46■■■□□ 2.63
CLN6-222ENST00000637667 TNRQ92752 1358 aa31.45■■■□□ 2.63
CLN6-222ENST00000637667 A2ML1A8K2U0 1454 aa31.44■■■□□ 2.62
CLN6-222ENST00000637667 PKD2Q13563 968 aa31.43■■■□□ 2.62
CLN6-222ENST00000637667 TCOF1Q13428 1488 aaKnown RBP31.4■■■□□ 2.62
CLN6-222ENST00000637667 RNF17Q9BXT8 1623 aaKnown RBP31.39■■■□□ 2.62
CLN6-222ENST00000637667 ABCC5O15440 1437 aa31.39■■■□□ 2.62
CLN6-222ENST00000637667 PTPN23Q9H3S7 1636 aa31.38■■■□□ 2.61
CLN6-222ENST00000637667 FGD6Q6ZV73 1430 aa31.37■■■□□ 2.61
CLN6-222ENST00000637667 LTBP4Q8N2S1 1624 aa31.36■■■□□ 2.61
CLN6-222ENST00000637667 SHANK2Q9UPX8 1470 aa31.36■■■□□ 2.61
CLN6-222ENST00000637667 EIF2AK4Q9P2K8 1649 aaKnown RBP31.35■■■□□ 2.61
CLN6-222ENST00000637667 DUOX2Q9NRD8 1548 aa31.35■■■□□ 2.61
CLN6-222ENST00000637667 ABCC3O15438 1527 aa31.34■■■□□ 2.61
CLN6-222ENST00000637667 KIF15Q9NS87 1388 aa31.34■■■□□ 2.61
CLN6-222ENST00000637667 DNMT1P26358 1616 aaKnown RBP31.34■■■□□ 2.61
CLN6-222ENST00000637667 DAPK1P53355 1430 aa31.32■■■□□ 2.6
CLN6-222ENST00000637667 RRP7BPQ9NSQ0 103 aa31.3■■■□□ 2.6
CLN6-222ENST00000637667 NLRP1Q9C000 1473 aa31.29■■■□□ 2.6
CLN6-222ENST00000637667 MROH1Q8NDA8 1641 aa31.29■■■□□ 2.6
CLN6-222ENST00000637667 ZNF335Q9H4Z2 1342 aaPredicted RBP31.28■■■□□ 2.6
CLN6-222ENST00000637667 CROCC2H7BZ55 1655 aa31.27■■■□□ 2.6
CLN6-222ENST00000637667 ZC3H13Q5T200 1668 aaKnown RBP31.27■■■□□ 2.6
CLN6-222ENST00000637667 ERBINQ96RT1 1412 aa31.26■■■□□ 2.6
CLN6-222ENST00000637667 THEMISQ8N1K5 641 aaPredicted RBP31.24■■■□□ 2.59
CLN6-222ENST00000637667 IQSEC2Q5JU85 1478 aa31.24■■■□□ 2.59
CLN6-222ENST00000637667 SPATA31D1Q6ZQQ2 1576 aa31.22■■■□□ 2.59
CLN6-222ENST00000637667 ERVK-7P63135 1459 aa31.21■■■□□ 2.59
CLN6-222ENST00000637667 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.21■■■□□ 2.59
CLN6-222ENST00000637667 CHIC2Q9UKJ5 165 aa31.21■■■□□ 2.59
CLN6-222ENST00000637667 ANKRD30AQ9BXX3 1397 aa31.2■■■□□ 2.59
CLN6-222ENST00000637667 UGGT1Q9NYU2 1555 aa31.2■■■□□ 2.58
CLN6-222ENST00000637667 ANKLE2Q86XL3 938 aa31.19■■■□□ 2.58
CLN6-222ENST00000637667 PRDM15P57071 1507 aaPredicted RBP31.18■■■□□ 2.58
CLN6-222ENST00000637667 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.16■■■□□ 2.58
CLN6-222ENST00000637667 NEURL4Q96JN8 1562 aa31.16■■■□□ 2.58
CLN6-222ENST00000637667 CEP152O94986 1710 aa31.15■■■□□ 2.58
CLN6-222ENST00000637667 FAM50AQ14320 339 aaKnown RBP31.14■■■□□ 2.58
CLN6-222ENST00000637667 ARHGAP31Q2M1Z3 1444 aa31.14■■■□□ 2.58
CLN6-222ENST00000637667 POLR1AO95602 1720 aaPredicted RBP31.12■■■□□ 2.57
CLN6-222ENST00000637667 KANK1Q14678 1352 aa31.11■■■□□ 2.57
CLN6-222ENST00000637667 DEPDC5O75140 1603 aa31.09■■■□□ 2.57
CLN6-222ENST00000637667 ADGRL2O95490 1459 aa31.08■■■□□ 2.57
CLN6-222ENST00000637667 NPHP4O75161 1426 aaPredicted RBP31.07■■■□□ 2.57
CLN6-222ENST00000637667 MED14O60244 1454 aa31.07■■■□□ 2.56
CLN6-222ENST00000637667 DISP3Q9P2K9 1392 aa31.06■■■□□ 2.56
CLN6-222ENST00000637667 CFAP65Q6ZU64 1925 aaKnown RBP31.05■■■□□ 2.56
CLN6-222ENST00000637667 UBAP1LF5GYI3 381 aa31.03■■■□□ 2.56
CLN6-222ENST00000637667 LMTK2Q8IWU2 1503 aa31.01■■■□□ 2.55
CLN6-222ENST00000637667 VWDEQ8N2E2 1590 aa31■■■□□ 2.55
CLN6-222ENST00000637667 ILDR2Q71H61 639 aa31■■■□□ 2.55
CLN6-222ENST00000637667 CPS1P31327 1500 aa30.99■■■□□ 2.55
CLN6-222ENST00000637667 ANKRD50Q9ULJ7 1429 aa30.98■■■□□ 2.55
CLN6-222ENST00000637667 UBR1Q8IWV7 1749 aa30.96■■■□□ 2.55
CLN6-222ENST00000637667 SOCS7O14512 581 aa30.96■■■□□ 2.55
CLN6-222ENST00000637667 IQGAP1P46940 1657 aa30.94■■■□□ 2.54
CLN6-222ENST00000637667 SCAF11Q99590 1463 aaKnown RBP30.94■■■□□ 2.54
CLN6-222ENST00000637667 ARHGAP23Q9P227 1491 aa30.93■■■□□ 2.54
CLN6-222ENST00000637667 LTKP29376 864 aa30.91■■■□□ 2.54
CLN6-222ENST00000637667 TXNDC2Q86VQ3 553 aa30.91■■■□□ 2.54
CLN6-222ENST00000637667 SLIT1O75093 1534 aa30.91■■■□□ 2.54
CLN6-222ENST00000637667 EFCAB6Q5THR3 1501 aa30.89■■■□□ 2.54
CLN6-222ENST00000637667 IDI1Q13907 227 aa30.89■■■□□ 2.54
CLN6-222ENST00000637667 STAG3Q9UJ98 1225 aa30.89■■■□□ 2.54
CLN6-222ENST00000637667 NOS1P29475 1434 aa30.88■■■□□ 2.53
CLN6-222ENST00000637667 EID1Q9Y6B2 187 aa30.87■■■□□ 2.53
CLN6-222ENST00000637667 PIK3C2BO00750 1634 aa30.87■■■□□ 2.53
CLN6-222ENST00000637667 TMEM2Q9UHN6 1383 aa30.86■■■□□ 2.53
CLN6-222ENST00000637667 ROCK1Q13464 1354 aa30.85■■■□□ 2.53
CLN6-222ENST00000637667 PPARGC1BQ86YN6 1023 aaKnown RBP30.85■■■□□ 2.53
CLN6-222ENST00000637667 TOM1O60784 492 aa30.84■■■□□ 2.53
CLN6-222ENST00000637667 SYNMO15061 1565 aa30.83■■■□□ 2.53
CLN6-222ENST00000637667 SLC52A1Q9NWF4 448 aa30.81■■■□□ 2.52
CLN6-222ENST00000637667 RPRD2Q5VT52 1461 aaKnown RBP30.81■■■□□ 2.52
CLN6-222ENST00000637667 SCAF1Q9H7N4 1312 aaKnown RBP30.78■■■□□ 2.52
CLN6-222ENST00000637667 PIP4K2BP78356 416 aa30.78■■■□□ 2.52
CLN6-222ENST00000637667 KDM5AP29375 1690 aaKnown RBP30.78■■■□□ 2.52
CLN6-222ENST00000637667 ITGAEP38570 1179 aa30.76■■■□□ 2.51
CLN6-222ENST00000637667 LRRC7Q96NW7 1537 aa30.76■■■□□ 2.51
CLN6-222ENST00000637667 STRCP1A6NGW2 1772 aa30.75■■■□□ 2.51
CLN6-222ENST00000637667 UNC13BO14795 1591 aa30.75■■■□□ 2.51
CLN6-222ENST00000637667 TET3O43151 1660 aa30.74■■■□□ 2.51
CLN6-222ENST00000637667 ADGRB3O60242 1522 aa30.74■■■□□ 2.51
CLN6-222ENST00000637667 HSPA1LP34931 641 aa30.69■■■□□ 2.5
CLN6-222ENST00000637667 ALKQ9UM73 1620 aa30.66■■■□□ 2.5
CLN6-222ENST00000637667 NUP155O75694 1391 aa30.66■■■□□ 2.5
CLN6-222ENST00000637667 GCC2Q8IWJ2 1684 aa30.65■■■□□ 2.5
CLN6-222ENST00000637667 SLC26A8Q96RN1 970 aa30.64■■■□□ 2.5
CLN6-222ENST00000637667 IQGAP3Q86VI3 1631 aa30.62■■■□□ 2.49
CLN6-222ENST00000637667 ZFYVE9O95405 1425 aa30.6■■■□□ 2.49
CLN6-222ENST00000637667 KCNA6P17658 529 aa30.6■■■□□ 2.49
CLN6-222ENST00000637667 RRBP1Q9P2E9 1410 aaKnown RBP30.59■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms