RNA–Protein interactions for RNA: ENST00000637383.1

SMARCA2-262, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 5

Gene SMARCA2, Length 162 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-262	ENST00000637383	CERK	Q8TCT0	537 aa		12.15	□□□□□ -0.46
SMARCA2-262	ENST00000637383	PTPRT	O14522	1441 aa		12.14	□□□□□ -0.47
SMARCA2-262	ENST00000637383	ABCC5	O15440	1437 aa		12.14	□□□□□ -0.47
SMARCA2-262	ENST00000637383	NCOA1	Q15788	1441 aa		12.14	□□□□□ -0.47
SMARCA2-262	ENST00000637383	STRC	Q7RTU9	1775 aa		12.14	□□□□□ -0.47
SMARCA2-262	ENST00000637383	MAST1	Q9Y2H9	1570 aa		12.13	□□□□□ -0.47
SMARCA2-262	ENST00000637383	FGD6	Q6ZV73	1430 aa		12.13	□□□□□ -0.47
SMARCA2-262	ENST00000637383	KDM5D	Q9BY66	1539 aa		12.12	□□□□□ -0.47
SMARCA2-262	ENST00000637383	RRP7BP	Q9NSQ0	103 aa		12.12	□□□□□ -0.47
SMARCA2-262	ENST00000637383	FAM135A	Q9P2D6	1515 aa		12.11	□□□□□ -0.47
SMARCA2-262	ENST00000637383	PZP	P20742	1482 aa		12.11	□□□□□ -0.47
SMARCA2-262	ENST00000637383	CAMSAP1	Q5T5Y3	1602 aa		12.11	□□□□□ -0.47
SMARCA2-262	ENST00000637383	NCKAP5L	Q9HCH0	1330 aa		12.11	□□□□□ -0.47
SMARCA2-262	ENST00000637383	TCOF1	Q13428	1488 aa	Known RBP	12.1	□□□□□ -0.47
SMARCA2-262	ENST00000637383	TNR	Q92752	1358 aa		12.1	□□□□□ -0.47
SMARCA2-262	ENST00000637383	KIF15	Q9NS87	1388 aa		12.1	□□□□□ -0.47
SMARCA2-262	ENST00000637383	PKD2	Q13563	968 aa		12.1	□□□□□ -0.47
SMARCA2-262	ENST00000637383	PTPN23	Q9H3S7	1636 aa		12.1	□□□□□ -0.47
SMARCA2-262	ENST00000637383	DAPK1	P53355	1430 aa		12.1	□□□□□ -0.47
SMARCA2-262	ENST00000637383	SHANK2	Q9UPX8	1470 aa		12.09	□□□□□ -0.47
SMARCA2-262	ENST00000637383	DUOX2	Q9NRD8	1548 aa		12.09	□□□□□ -0.47
SMARCA2-262	ENST00000637383	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	12.09	□□□□□ -0.47
SMARCA2-262	ENST00000637383	A2ML1	A8K2U0	1454 aa		12.08	□□□□□ -0.47
SMARCA2-262	ENST00000637383	PLA2R1	Q13018	1463 aa		12.08	□□□□□ -0.47
SMARCA2-262	ENST00000637383	MYO3A	Q8NEV4	1616 aa		12.08	□□□□□ -0.48
SMARCA2-262	ENST00000637383	CHIC2	Q9UKJ5	165 aa		12.08	□□□□□ -0.48
SMARCA2-262	ENST00000637383	RNF17	Q9BXT8	1623 aa	Known RBP	12.07	□□□□□ -0.48
SMARCA2-262	ENST00000637383	ZNF142	P52746	1687 aa	Predicted RBP	12.06	□□□□□ -0.48
SMARCA2-262	ENST00000637383	ABCC3	O15438	1527 aa		12.06	□□□□□ -0.48
SMARCA2-262	ENST00000637383	ERBIN	Q96RT1	1412 aa		12.06	□□□□□ -0.48
SMARCA2-262	ENST00000637383	FAM50A	Q14320	339 aa	Known RBP	12.06	□□□□□ -0.48
SMARCA2-262	ENST00000637383	ANKRD30A	Q9BXX3	1397 aa		12.05	□□□□□ -0.48
SMARCA2-262	ENST00000637383	EIF2AK4	Q9P2K8	1649 aa	Known RBP	12.05	□□□□□ -0.48
SMARCA2-262	ENST00000637383	THEMIS	Q8N1K5	641 aa	Predicted RBP	12.05	□□□□□ -0.48
SMARCA2-262	ENST00000637383	DNMT1	P26358	1616 aa	Known RBP	12.04	□□□□□ -0.48
SMARCA2-262	ENST00000637383	MROH1	Q8NDA8	1641 aa		12.04	□□□□□ -0.48
SMARCA2-262	ENST00000637383	NLRP1	Q9C000	1473 aa		12.04	□□□□□ -0.48
SMARCA2-262	ENST00000637383	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	12.04	□□□□□ -0.48
SMARCA2-262	ENST00000637383	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	12.03	□□□□□ -0.48
SMARCA2-262	ENST00000637383	LTBP4	Q8N2S1	1624 aa		12.03	□□□□□ -0.48
SMARCA2-262	ENST00000637383	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	12.03	□□□□□ -0.48
SMARCA2-262	ENST00000637383	ANKLE2	Q86XL3	938 aa		12.02	□□□□□ -0.49
SMARCA2-262	ENST00000637383	CROCC2	H7BZ55	1655 aa		12.02	□□□□□ -0.49
SMARCA2-262	ENST00000637383	ERVK-7	P63135	1459 aa		12.02	□□□□□ -0.49
SMARCA2-262	ENST00000637383	PRDM15	P57071	1507 aa	Predicted RBP	12.01	□□□□□ -0.49
SMARCA2-262	ENST00000637383	ARHGAP31	Q2M1Z3	1444 aa		12.01	□□□□□ -0.49
SMARCA2-262	ENST00000637383	SPATA31D1	Q6ZQQ2	1576 aa		12.01	□□□□□ -0.49
SMARCA2-262	ENST00000637383	ZC3H13	Q5T200	1668 aa	Known RBP	12	□□□□□ -0.49
SMARCA2-262	ENST00000637383	MSH5	O43196	834 aa		12	□□□□□ -0.49
SMARCA2-262	ENST00000637383	KANK1	Q14678	1352 aa		12	□□□□□ -0.49
SMARCA2-262	ENST00000637383	ADGRL2	O95490	1459 aa		12	□□□□□ -0.49
SMARCA2-262	ENST00000637383	UGGT1	Q9NYU2	1555 aa		12	□□□□□ -0.49
SMARCA2-262	ENST00000637383	PPARGC1B	Q86YN6	1023 aa	Known RBP	11.99	□□□□□ -0.49
SMARCA2-262	ENST00000637383	ANKRD50	Q9ULJ7	1429 aa		11.97	□□□□□ -0.49
SMARCA2-262	ENST00000637383	IQSEC2	Q5JU85	1478 aa		11.96	□□□□□ -0.49
SMARCA2-262	ENST00000637383	CEP152	O94986	1710 aa		11.96	□□□□□ -0.49
SMARCA2-262	ENST00000637383	DEPDC5	O75140	1603 aa		11.96	□□□□□ -0.5
SMARCA2-262	ENST00000637383	VWDE	Q8N2E2	1590 aa		11.96	□□□□□ -0.5
SMARCA2-262	ENST00000637383	NEURL4	Q96JN8	1562 aa		11.96	□□□□□ -0.5
SMARCA2-262	ENST00000637383	LMTK2	Q8IWU2	1503 aa		11.96	□□□□□ -0.5
SMARCA2-262	ENST00000637383	MED14	O60244	1454 aa		11.95	□□□□□ -0.5
SMARCA2-262	ENST00000637383	NPHP4	O75161	1426 aa	Predicted RBP	11.94	□□□□□ -0.5
SMARCA2-262	ENST00000637383	ROCK1	Q13464	1354 aa		11.94	□□□□□ -0.5
SMARCA2-262	ENST00000637383	LTK	P29376	864 aa		11.93	□□□□□ -0.5
SMARCA2-262	ENST00000637383	IDI1	Q13907	227 aa		11.93	□□□□□ -0.5
SMARCA2-262	ENST00000637383	TXNDC2	Q86VQ3	553 aa		11.93	□□□□□ -0.5
SMARCA2-262	ENST00000637383	CFAP65	Q6ZU64	1925 aa	Known RBP	11.93	□□□□□ -0.5
SMARCA2-262	ENST00000637383	ITGAE	P38570	1179 aa		11.92	□□□□□ -0.5
SMARCA2-262	ENST00000637383	STAG3	Q9UJ98	1225 aa		11.92	□□□□□ -0.5
SMARCA2-262	ENST00000637383	UBAP1L	F5GYI3	381 aa		11.91	□□□□□ -0.5
SMARCA2-262	ENST00000637383	NOS1	P29475	1434 aa		11.91	□□□□□ -0.5
SMARCA2-262	ENST00000637383	POLR1A	O95602	1720 aa	Predicted RBP	11.91	□□□□□ -0.5
SMARCA2-262	ENST00000637383	TMEM2	Q9UHN6	1383 aa		11.91	□□□□□ -0.5
SMARCA2-262	ENST00000637383	SCAF11	Q99590	1463 aa	Known RBP	11.9	□□□□□ -0.5
SMARCA2-262	ENST00000637383	ARHGAP23	Q9P227	1491 aa		11.9	□□□□□ -0.5
SMARCA2-262	ENST00000637383	SLC52A1	Q9NWF4	448 aa		11.9	□□□□□ -0.5
SMARCA2-262	ENST00000637383	EID1	Q9Y6B2	187 aa		11.9	□□□□□ -0.5
SMARCA2-262	ENST00000637383	EFCAB6	Q5THR3	1501 aa		11.9	□□□□□ -0.5
SMARCA2-262	ENST00000637383	UBR1	Q8IWV7	1749 aa		11.89	□□□□□ -0.51
SMARCA2-262	ENST00000637383	SLIT1	O75093	1534 aa		11.89	□□□□□ -0.51
SMARCA2-262	ENST00000637383	CPS1	P31327	1500 aa		11.89	□□□□□ -0.51
SMARCA2-262	ENST00000637383	RPRD2	Q5VT52	1461 aa	Known RBP	11.89	□□□□□ -0.51
SMARCA2-262	ENST00000637383	SYNM	O15061	1565 aa		11.87	□□□□□ -0.51
SMARCA2-262	ENST00000637383	IQGAP1	P46940	1657 aa		11.87	□□□□□ -0.51
SMARCA2-262	ENST00000637383	PIK3C2B	O00750	1634 aa		11.86	□□□□□ -0.51
SMARCA2-262	ENST00000637383	NUP155	O75694	1391 aa		11.86	□□□□□ -0.51
SMARCA2-262	ENST00000637383	RRBP1	Q9P2E9	1410 aa	Known RBP	11.86	□□□□□ -0.51
SMARCA2-262	ENST00000637383	TOM1	O60784	492 aa		11.85	□□□□□ -0.51
SMARCA2-262	ENST00000637383	UNC13B	O14795	1591 aa		11.84	□□□□□ -0.51
SMARCA2-262	ENST00000637383	PIP4K2B	P78356	416 aa		11.83	□□□□□ -0.52
SMARCA2-262	ENST00000637383	TET3	O43151	1660 aa		11.83	□□□□□ -0.52
SMARCA2-262	ENST00000637383	ADGRB3	O60242	1522 aa		11.82	□□□□□ -0.52
SMARCA2-262	ENST00000637383	LRRC7	Q96NW7	1537 aa		11.82	□□□□□ -0.52
SMARCA2-262	ENST00000637383	KDM5A	P29375	1690 aa	Known RBP	11.82	□□□□□ -0.52
SMARCA2-262	ENST00000637383	SCAF1	Q9H7N4	1312 aa	Known RBP	11.82	□□□□□ -0.52
SMARCA2-262	ENST00000637383	SLC26A8	Q96RN1	970 aa		11.81	□□□□□ -0.52
SMARCA2-262	ENST00000637383	CHGA	P10645	457 aa	Known RBP	11.8	□□□□□ -0.52
SMARCA2-262	ENST00000637383	HDGF	P51858	240 aa	Known RBP	11.8	□□□□□ -0.52
SMARCA2-262	ENST00000637383	IQGAP3	Q86VI3	1631 aa		11.79	□□□□□ -0.52
SMARCA2-262	ENST00000637383	ZFYVE9	O95405	1425 aa		11.79	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms