RNA–Protein interactions for RNA: ENST00000637266.2

SCN2A-215, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-215ENST00000637266 RAB3GAP2Q9H2M9 1393 aa8.64□□□□□ -1.03
SCN2A-215ENST00000637266 MYOM3Q5VTT5 1437 aa8.64□□□□□ -1.03
SCN2A-215ENST00000637266 DEKP35659 375 aaKnown RBP8.64□□□□□ -1.03
SCN2A-215ENST00000637266 FYCO1Q9BQS8 1478 aa8.64□□□□□ -1.03
SCN2A-215ENST00000637266 RGS3P49796 1198 aa8.64□□□□□ -1.03
SCN2A-215ENST00000637266 ARGLU1Q9NWB6 273 aaPredicted RBP8.63□□□□□ -1.03
SCN2A-215ENST00000637266 HSP90AB4PQ58FF6 505 aa8.63□□□□□ -1.03
SCN2A-215ENST00000637266 SMC4Q9NTJ3 1288 aa8.63□□□□□ -1.03
SCN2A-215ENST00000637266 FRAT1Q92837 279 aaPredicted RBP8.63□□□□□ -1.03
SCN2A-215ENST00000637266 CCDC47Q96A33 483 aaKnown RBP8.63□□□□□ -1.03
SCN2A-215ENST00000637266 CT47B1P0C2W7 299 aaPredicted RBP8.63□□□□□ -1.03
SCN2A-215ENST00000637266 RDXP35241 583 aaKnown RBP8.63□□□□□ -1.03
SCN2A-215ENST00000637266 FAM161AQ3B820 660 aa8.63□□□□□ -1.03
SCN2A-215ENST00000637266 CPLX2Q6PUV4 134 aaKnown RBP8.62□□□□□ -1.03
SCN2A-215ENST00000637266 CEP89Q96ST8 783 aa8.62□□□□□ -1.03
SCN2A-215ENST00000637266 RBM19Q9Y4C8 960 aaKnown RBP8.62□□□□□ -1.03
SCN2A-215ENST00000637266 IPO7O95373 1038 aaKnown RBP8.62□□□□□ -1.03
SCN2A-215ENST00000637266 MYO6Q9UM54 1294 aa8.62□□□□□ -1.03
SCN2A-215ENST00000637266 NUP155O75694 1391 aa8.62□□□□□ -1.03
SCN2A-215ENST00000637266 PIP4K2AP48426 406 aaPredicted RBP8.61□□□□□ -1.03
SCN2A-215ENST00000637266 ERCC4Q92889 916 aaPredicted RBP8.61□□□□□ -1.03
SCN2A-215ENST00000637266 HSP90B1P14625 803 aaKnown RBP8.61□□□□□ -1.03
SCN2A-215ENST00000637266 NUCB2P80303 420 aa8.61□□□□□ -1.03
SCN2A-215ENST00000637266 CWC15Q9P013 229 aaKnown RBP8.61□□□□□ -1.03
SCN2A-215ENST00000637266 DAPK1P53355 1430 aa8.61□□□□□ -1.03
SCN2A-215ENST00000637266 DCAF11Q8TEB1 546 aa8.61□□□□□ -1.03
SCN2A-215ENST00000637266 SOGA1O94964 1423 aa8.61□□□□□ -1.03
SCN2A-215ENST00000637266 MCM2P49736 904 aa8.61□□□□□ -1.03
SCN2A-215ENST00000637266 DDX19BQ9UMR2 479 aa8.6□□□□□ -1.03
SCN2A-215ENST00000637266 SALL2Q9Y467 1007 aaPredicted RBP8.6□□□□□ -1.03
SCN2A-215ENST00000637266 HSPA5P11021 654 aaKnown RBP8.6□□□□□ -1.03
SCN2A-215ENST00000637266 PKNOX2Q96KN3 472 aa8.6□□□□□ -1.03
SCN2A-215ENST00000637266 RNF20Q5VTR2 975 aa8.6□□□□□ -1.03
SCN2A-215ENST00000637266 CADPSQ9ULU8 1353 aa8.6□□□□□ -1.03
SCN2A-215ENST00000637266 HMGN5P82970 282 aaKnown RBP8.6□□□□□ -1.03
SCN2A-215ENST00000637266 RRBP1Q9P2E9 1410 aaKnown RBP8.6□□□□□ -1.03
SCN2A-215ENST00000637266 NAT10Q9H0A0 1025 aaKnown RBP8.59□□□□□ -1.03
SCN2A-215ENST00000637266 U2SURPO15042 1029 aaKnown RBP8.59□□□□□ -1.03
SCN2A-215ENST00000637266 MFAP1P55081 439 aaKnown RBP8.59□□□□□ -1.03
SCN2A-215ENST00000637266 DCTN1Q14203 1278 aa8.59□□□□□ -1.03
SCN2A-215ENST00000637266 TAF3Q5VWG9 929 aa8.59□□□□□ -1.03
SCN2A-215ENST00000637266 API5Q9BZZ5 524 aaKnown RBP8.59□□□□□ -1.04
SCN2A-215ENST00000637266 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.59□□□□□ -1.04
SCN2A-215ENST00000637266 NPHP1O15259 732 aa8.58□□□□□ -1.04
SCN2A-215ENST00000637266 SRPK2P78362 688 aaKnown RBP8.58□□□□□ -1.04
SCN2A-215ENST00000637266 ITPRIPQ8IWB1 547 aa8.58□□□□□ -1.04
SCN2A-215ENST00000637266 ARXQ96QS3 562 aa8.58□□□□□ -1.04
SCN2A-215ENST00000637266 HFM1A2PYH4 1435 aa8.58□□□□□ -1.04
SCN2A-215ENST00000637266 PLCB2Q00722 1185 aa8.58□□□□□ -1.04
SCN2A-215ENST00000637266 MPHOSPH9Q99550 1183 aa8.58□□□□□ -1.04
SCN2A-215ENST00000637266 BRD4O60885 1362 aaPredicted RBP8.58□□□□□ -1.04
SCN2A-215ENST00000637266 AMOTL1Q8IY63 956 aa8.58□□□□□ -1.04
SCN2A-215ENST00000637266 ZKSCAN1P17029 563 aaPredicted RBP8.57□□□□□ -1.04
SCN2A-215ENST00000637266 PKD2Q13563 968 aa8.57□□□□□ -1.04
SCN2A-215ENST00000637266 AK7Q96M32 723 aa8.57□□□□□ -1.04
SCN2A-215ENST00000637266 DIAPH3Q9NSV4 1193 aa8.57□□□□□ -1.04
SCN2A-215ENST00000637266 NAP1L2Q9ULW6 460 aaPredicted RBP8.57□□□□□ -1.04
SCN2A-215ENST00000637266 GOLGA6L19H0YKK7 550 aa8.57□□□□□ -1.04
SCN2A-215ENST00000637266 EVC2Q86UK5 1308 aa8.57□□□□□ -1.04
SCN2A-215ENST00000637266 MBD3O95983 291 aa8.57□□□□□ -1.04
SCN2A-215ENST00000637266 HSP90AA2PQ14568 343 aaPredicted RBP8.57□□□□□ -1.04
SCN2A-215ENST00000637266 ZKSCAN2Q63HK3 967 aa8.57□□□□□ -1.04
SCN2A-215ENST00000637266 EHBP1L1Q8N3D4 1523 aa8.56□□□□□ -1.04
SCN2A-215ENST00000637266 MROH2BQ7Z745 1585 aa8.56□□□□□ -1.04
SCN2A-215ENST00000637266 CCDC66A2RUB6 948 aa8.56□□□□□ -1.04
SCN2A-215ENST00000637266 CAGE1Q8TC20 777 aa8.56□□□□□ -1.04
SCN2A-215ENST00000637266 EID1Q9Y6B2 187 aa8.56□□□□□ -1.04
SCN2A-215ENST00000637266 HIP1O00291 1037 aa8.56□□□□□ -1.04
SCN2A-215ENST00000637266 GSE1Q14687 1217 aa8.55□□□□□ -1.04
SCN2A-215ENST00000637266 ZNF428Q96B54 188 aa8.55□□□□□ -1.04
SCN2A-215ENST00000637266 RGL3Q3MIN7 710 aa8.55□□□□□ -1.04
SCN2A-215ENST00000637266 VGFO15240 615 aaPredicted RBP8.55□□□□□ -1.04
SCN2A-215ENST00000637266 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.55□□□□□ -1.04
SCN2A-215ENST00000637266 CCDC39Q9UFE4 941 aa8.55□□□□□ -1.04
SCN2A-215ENST00000637266 PDCP20941 246 aa8.54□□□□□ -1.04
SCN2A-215ENST00000637266 CASKIN1Q8WXD9 1431 aa8.54□□□□□ -1.04
SCN2A-215ENST00000637266 CHMP5Q9NZZ3 219 aa8.54□□□□□ -1.04
SCN2A-215ENST00000637266 SYNE3Q6ZMZ3 975 aa8.54□□□□□ -1.04
SCN2A-215ENST00000637266 U2AF1L5P0DN76 240 aaPredicted RBP8.54□□□□□ -1.04
SCN2A-215ENST00000637266 U2AF1Q01081 240 aaKnown RBP eCLIP8.54□□□□□ -1.04
SCN2A-215ENST00000637266 CC2D1BQ5T0F9 858 aaKnown RBP8.54□□□□□ -1.04
SCN2A-215ENST00000637266 ERC2O15083 957 aa8.54□□□□□ -1.04
SCN2A-215ENST00000637266 PRKCSHP14314 528 aaPredicted RBP8.53□□□□□ -1.04
SCN2A-215ENST00000637266 KCNH8Q96L42 1107 aa8.53□□□□□ -1.04
SCN2A-215ENST00000637266 AKNAQ7Z591 1439 aa8.53□□□□□ -1.04
SCN2A-215ENST00000637266 GORABQ5T7V8 394 aa8.53□□□□□ -1.04
SCN2A-215ENST00000637266 HECW1Q76N89 1606 aa8.53□□□□□ -1.04
SCN2A-215ENST00000637266 TSPYL1Q9H0U9 437 aa8.53□□□□□ -1.04
SCN2A-215ENST00000637266 IRX6P78412 446 aaPredicted RBP8.53□□□□□ -1.04
SCN2A-215ENST00000637266 POLA1P09884 1462 aaPredicted RBP8.52□□□□□ -1.04
SCN2A-215ENST00000637266 BECN2A8MW95 431 aa8.52□□□□□ -1.04
SCN2A-215ENST00000637266 AKAP17AQ02040 695 aaKnown RBP8.52□□□□□ -1.05
SCN2A-215ENST00000637266 USP47Q96K76 1375 aa8.52□□□□□ -1.05
SCN2A-215ENST00000637266 NEXNQ0ZGT2 675 aa8.52□□□□□ -1.05
SCN2A-215ENST00000637266 DHX29Q7Z478 1369 aaKnown RBP8.52□□□□□ -1.05
SCN2A-215ENST00000637266 HMGB1P09429 215 aaKnown RBP8.52□□□□□ -1.05
SCN2A-215ENST00000637266 MRE11P49959 708 aa8.52□□□□□ -1.05
SCN2A-215ENST00000637266 HSP90B2PQ58FF3 399 aa8.52□□□□□ -1.05
SCN2A-215ENST00000637266 KIF2AO00139 706 aaPredicted RBP8.51□□□□□ -1.05
SCN2A-215ENST00000637266 IQCEQ6IPM2 695 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms