RNA–Protein interactions for RNA: ENST00000635392.1

SMARCA2-240, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 291 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-240ENST00000635392 AMHR2Q16671 573 aa12.35□□□□□ -0.43
SMARCA2-240ENST00000635392 C14orf37Q86TY3 774 aa12.34□□□□□ -0.43
SMARCA2-240ENST00000635392 KDM4FA0A1W2PPD8 638 aa12.33□□□□□ -0.44
SMARCA2-240ENST00000635392 NPDC1Q9NQX5 325 aaPredicted RBP12.32□□□□□ -0.44
SMARCA2-240ENST00000635392 HS3ST6Q96QI5 342 aa12.31□□□□□ -0.44
SMARCA2-240ENST00000635392 FAM205CA6NFA0 338 aa12.3□□□□□ -0.44
SMARCA2-240ENST00000635392 KRTAP3-3Q9BYR6 98 aa12.3□□□□□ -0.44
SMARCA2-240ENST00000635392 KRTAP3-2Q9BYR7 98 aa12.3□□□□□ -0.44
SMARCA2-240ENST00000635392 FAM117AQ9C073 453 aa12.3□□□□□ -0.44
SMARCA2-240ENST00000635392 DAXXQ9UER7 740 aaPredicted RBP12.3□□□□□ -0.44
SMARCA2-240ENST00000635392 PHF14O94880 888 aa12.29□□□□□ -0.44
SMARCA2-240ENST00000635392 PARP9Q8IXQ6 854 aa12.29□□□□□ -0.44
SMARCA2-240ENST00000635392 PLEKHG3A1L390 1219 aa12.28□□□□□ -0.44
SMARCA2-240ENST00000635392 PCDHGA4Q9Y5G9 962 aa12.28□□□□□ -0.44
SMARCA2-240ENST00000635392 PCDHGA10Q9Y5H3 936 aa12.28□□□□□ -0.44
SMARCA2-240ENST00000635392 EN1Q05925 392 aaPredicted RBP12.27□□□□□ -0.45
SMARCA2-240ENST00000635392 EPAS1Q99814 870 aa12.27□□□□□ -0.45
SMARCA2-240ENST00000635392 CDHR5Q9HBB8 845 aa12.27□□□□□ -0.45
SMARCA2-240ENST00000635392 HOXB3P14651 431 aaPredicted RBP12.26□□□□□ -0.45
SMARCA2-240ENST00000635392 ZNF316A6NFI3 1004 aaPredicted RBP12.25□□□□□ -0.45
SMARCA2-240ENST00000635392 TSR1Q2NL82 804 aaKnown RBP12.2□□□□□ -0.46
SMARCA2-240ENST00000635392 TYW1BQ6NUM6 668 aa12.2□□□□□ -0.46
SMARCA2-240ENST00000635392 TMUB1Q9BVT8 246 aa12.2□□□□□ -0.46
SMARCA2-240ENST00000635392 REPIN1Q9BWE0 567 aaKnown RBP12.2□□□□□ -0.46
SMARCA2-240ENST00000635392 MAP3K7O43318 606 aa12.19□□□□□ -0.46
SMARCA2-240ENST00000635392 RBM33Q96EV2 1170 aaKnown RBP12.19□□□□□ -0.46
SMARCA2-240ENST00000635392 FOSBP53539 338 aa12.18□□□□□ -0.46
SMARCA2-240ENST00000635392 DDRGK1Q96HY6 314 aa12.18□□□□□ -0.46
SMARCA2-240ENST00000635392 JPH4Q96JJ6 628 aa12.18□□□□□ -0.46
SMARCA2-240ENST00000635392 PHOX2BQ99453 314 aa12.17□□□□□ -0.46
SMARCA2-240ENST00000635392 FBXW7Q969H0 707 aa12.16□□□□□ -0.46
SMARCA2-240ENST00000635392 MS4A1P11836 297 aa12.15□□□□□ -0.46
SMARCA2-240ENST00000635392 HOXB1P14653 301 aaPredicted RBP12.15□□□□□ -0.46
SMARCA2-240ENST00000635392 GIGYF2Q6Y7W6 1299 aaKnown RBP12.14□□□□□ -0.47
SMARCA2-240ENST00000635392 TTLL12Q14166 644 aaPredicted RBP12.13□□□□□ -0.47
SMARCA2-240ENST00000635392 ZNF710Q8N1W2 664 aa12.12□□□□□ -0.47
SMARCA2-240ENST00000635392 GOPCQ9HD26 462 aa12.11□□□□□ -0.47
SMARCA2-240ENST00000635392 DOK7Q18PE1 504 aa12.1□□□□□ -0.47
SMARCA2-240ENST00000635392 C6orf132Q5T0Z8 1188 aa12.1□□□□□ -0.47
SMARCA2-240ENST00000635392 TTC13Q8NBP0 860 aa12.1□□□□□ -0.47
SMARCA2-240ENST00000635392 KHSRPQ92945 711 aaKnown RBP eCLIP12.1□□□□□ -0.47
SMARCA2-240ENST00000635392 ARSIQ5FYB1 569 aa12.08□□□□□ -0.48
SMARCA2-240ENST00000635392 GPR153Q6NV75 609 aa12.08□□□□□ -0.48
SMARCA2-240ENST00000635392 ZDHHC16Q969W1 377 aa12.08□□□□□ -0.48
SMARCA2-240ENST00000635392 ERBB3P21860 1342 aa12.08□□□□□ -0.48
SMARCA2-240ENST00000635392 NUDT7P0C024 238 aa12.07□□□□□ -0.48
SMARCA2-240ENST00000635392 FAM161AQ3B820 660 aa12.07□□□□□ -0.48
SMARCA2-240ENST00000635392 CLCN1P35523 988 aa12.06□□□□□ -0.48
SMARCA2-240ENST00000635392 MDM2Q00987 491 aaPredicted RBP12.06□□□□□ -0.48
SMARCA2-240ENST00000635392 ZNF454Q8N9F8 522 aa12.06□□□□□ -0.48
SMARCA2-240ENST00000635392 CERKQ8TCT0 537 aa12.06□□□□□ -0.48
SMARCA2-240ENST00000635392 ADAM33Q9BZ11 813 aa12.06□□□□□ -0.48
SMARCA2-240ENST00000635392 ADGRG1Q9Y653 693 aa12.06□□□□□ -0.48
SMARCA2-240ENST00000635392 PADI6Q6TGC4 694 aa12.05□□□□□ -0.48
SMARCA2-240ENST00000635392 METTL3Q86U44 580 aaKnown RBP12.05□□□□□ -0.48
SMARCA2-240ENST00000635392 ZSWIM6Q9HCJ5 1215 aa12.05□□□□□ -0.48
SMARCA2-240ENST00000635392 GPCPD1Q9NPB8 672 aa12.05□□□□□ -0.48
SMARCA2-240ENST00000635392 SUPT5HO00267 1087 aaKnown RBP12.04□□□□□ -0.48
SMARCA2-240ENST00000635392 PXYLP1Q8TE99 480 aa12.03□□□□□ -0.48
SMARCA2-240ENST00000635392 RBM27Q9P2N5 1060 aaKnown RBP12.03□□□□□ -0.48
SMARCA2-240ENST00000635392 OATP04181 439 aa12.02□□□□□ -0.49
SMARCA2-240ENST00000635392 SSTR3P32745 418 aaPredicted RBP12.02□□□□□ -0.49
SMARCA2-240ENST00000635392 VARS2Q5ST30 1063 aaKnown RBP12.02□□□□□ -0.49
SMARCA2-240ENST00000635392 ARXQ96QS3 562 aa12.02□□□□□ -0.49
SMARCA2-240ENST00000635392 ZMYND15Q9H091 742 aa12.02□□□□□ -0.49
SMARCA2-240ENST00000635392 RIMBP2O15034 1052 aa12□□□□□ -0.49
SMARCA2-240ENST00000635392 ONECUT3O60422 494 aaPredicted RBP12□□□□□ -0.49
SMARCA2-240ENST00000635392 NLRP7Q8WX94 980 aa12□□□□□ -0.49
SMARCA2-240ENST00000635392 FAM217BQ9NTX9 383 aaPredicted RBP12□□□□□ -0.49
SMARCA2-240ENST00000635392 PRSS12P56730 875 aa11.99□□□□□ -0.49
SMARCA2-240ENST00000635392 SH3D19Q5HYK7 790 aa11.99□□□□□ -0.49
SMARCA2-240ENST00000635392 FAM198AQ9UFP1 575 aa11.98□□□□□ -0.49
SMARCA2-240ENST00000635392 LHX6Q9UPM6 363 aa11.97□□□□□ -0.49
SMARCA2-240ENST00000635392 CDCA7LQ96GN5 454 aa11.96□□□□□ -0.49
SMARCA2-240ENST00000635392 COL9A1P20849 921 aa11.95□□□□□ -0.5
SMARCA2-240ENST00000635392 BEGAINQ9BUH8 593 aa11.95□□□□□ -0.5
SMARCA2-240ENST00000635392 SKIV2LQ15477 1246 aaKnown RBP11.94□□□□□ -0.5
SMARCA2-240ENST00000635392 RNF166Q96A37 237 aaPredicted RBP11.94□□□□□ -0.5
SMARCA2-240ENST00000635392 PCMTD1Q96MG8 357 aaPredicted RBP11.94□□□□□ -0.5
SMARCA2-240ENST00000635392 BCL2L12Q9HB09 334 aa11.93□□□□□ -0.5
SMARCA2-240ENST00000635392 ZNF687Q8N1G0 1237 aa11.92□□□□□ -0.5
SMARCA2-240ENST00000635392 EYA1Q99502 592 aa11.92□□□□□ -0.5
SMARCA2-240ENST00000635392 RSPH6AQ9H0K4 717 aa11.91□□□□□ -0.5
SMARCA2-240ENST00000635392 C3orf80F5H4A9 247 aa11.9□□□□□ -0.5
SMARCA2-240ENST00000635392 FLIIQ13045 1269 aa11.9□□□□□ -0.5
SMARCA2-240ENST00000635392 PROCA1Q8NCQ7 364 aaPredicted RBP11.9□□□□□ -0.5
SMARCA2-240ENST00000635392 RBM46Q8TBY0 533 aaKnown RBP11.89□□□□□ -0.51
SMARCA2-240ENST00000635392 MYT1LQ9UL68 1186 aa11.89□□□□□ -0.51
SMARCA2-240ENST00000635392 PSDA5PKW4 1024 aaPredicted RBP11.88□□□□□ -0.51
SMARCA2-240ENST00000635392 PPP4R3BQ5MIZ7 849 aa11.88□□□□□ -0.51
SMARCA2-240ENST00000635392 TSKSQ9UJT2 592 aa11.88□□□□□ -0.51
SMARCA2-240ENST00000635392 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.86□□□□□ -0.51
SMARCA2-240ENST00000635392 RCCD1A6NED2 376 aa11.86□□□□□ -0.51
SMARCA2-240ENST00000635392 MYSM1Q5VVJ2 828 aa11.86□□□□□ -0.51
SMARCA2-240ENST00000635392 PPP1R3GB7ZBB8 358 aa11.85□□□□□ -0.51
SMARCA2-240ENST00000635392 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.85□□□□□ -0.51
SMARCA2-240ENST00000635392 POLR3EQ9NVU0 708 aa11.84□□□□□ -0.51
SMARCA2-240ENST00000635392 TBC1D2Q9BYX2 928 aa11.83□□□□□ -0.52
SMARCA2-240ENST00000635392 PTPREP23469 700 aa11.82□□□□□ -0.52
SMARCA2-240ENST00000635392 HOMEZQ8IX15 550 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms