RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 EFCAB2Q5VUJ9 269 aa10.12□□□□□ -0.79
BRCA1-230ENST00000634433 KCNH8Q96L42 1107 aa10.12□□□□□ -0.79
BRCA1-230ENST00000634433 ARHGAP5Q13017 1502 aa10.12□□□□□ -0.79
BRCA1-230ENST00000634433 CDC42BPBQ9Y5S2 1711 aa10.12□□□□□ -0.79
BRCA1-230ENST00000634433 PLCH2O75038 1416 aa10.11□□□□□ -0.79
BRCA1-230ENST00000634433 SAMD9LQ8IVG5 1584 aa10.11□□□□□ -0.79
BRCA1-230ENST00000634433 KIF15Q9NS87 1388 aa10.1□□□□□ -0.79
BRCA1-230ENST00000634433 MYO5CQ9NQX4 1742 aa10.1□□□□□ -0.79
BRCA1-230ENST00000634433 TTC37Q6PGP7 1564 aa10.1□□□□□ -0.79
BRCA1-230ENST00000634433 PZPP20742 1482 aa10.1□□□□□ -0.79
BRCA1-230ENST00000634433 COL17A1Q9UMD9 1497 aaPredicted RBP10.1□□□□□ -0.79
BRCA1-230ENST00000634433 RPRD2Q5VT52 1461 aaKnown RBP10.09□□□□□ -0.79
BRCA1-230ENST00000634433 ADAMTSL3P82987 1691 aa10.09□□□□□ -0.79
BRCA1-230ENST00000634433 CHMP4AQ9BY43 222 aa10.09□□□□□ -0.79
BRCA1-230ENST00000634433 MAST1Q9Y2H9 1570 aa10.09□□□□□ -0.79
BRCA1-230ENST00000634433 WDR7Q9Y4E6 1490 aa10.08□□□□□ -0.8
BRCA1-230ENST00000634433 NUP155O75694 1391 aa10.08□□□□□ -0.8
BRCA1-230ENST00000634433 FOXD1Q16676 465 aa10.08□□□□□ -0.8
BRCA1-230ENST00000634433 ARAP3Q8WWN8 1544 aa10.08□□□□□ -0.8
BRCA1-230ENST00000634433 IGSF3O75054 1194 aa10.07□□□□□ -0.8
BRCA1-230ENST00000634433 PKD2Q13563 968 aa10.07□□□□□ -0.8
BRCA1-230ENST00000634433 SYCP2Q9BX26 1530 aa10.07□□□□□ -0.8
BRCA1-230ENST00000634433 KDM5DQ9BY66 1539 aa10.07□□□□□ -0.8
BRCA1-230ENST00000634433 L3MBTL2Q969R5 705 aa10.07□□□□□ -0.8
BRCA1-230ENST00000634433 EIF4G2P78344 907 aaKnown RBP eCLIP10.04□□□□□ -0.8
BRCA1-230ENST00000634433 PLXNC1O60486 1568 aa10.04□□□□□ -0.8
BRCA1-230ENST00000634433 DHX37Q8IY37 1157 aaKnown RBP10.03□□□□□ -0.8
BRCA1-230ENST00000634433 DUOX2Q9NRD8 1548 aa10.03□□□□□ -0.8
BRCA1-230ENST00000634433 DDX10Q13206 875 aaKnown RBP10.02□□□□□ -0.8
BRCA1-230ENST00000634433 BCORL1Q5H9F3 1711 aa10.02□□□□□ -0.81
BRCA1-230ENST00000634433 RTEL1-TNFRSF6BF6WH68 1400 aa10.02□□□□□ -0.81
BRCA1-230ENST00000634433 CD109Q6YHK3 1445 aa10.02□□□□□ -0.81
BRCA1-230ENST00000634433 ABCC1P33527 1531 aa10.02□□□□□ -0.81
BRCA1-230ENST00000634433 ERBINQ96RT1 1412 aa10.01□□□□□ -0.81
BRCA1-230ENST00000634433 ARHGEF12Q9NZN5 1544 aa10.01□□□□□ -0.81
BRCA1-230ENST00000634433 SPAG9O60271 1321 aaKnown RBP10□□□□□ -0.81
BRCA1-230ENST00000634433 PTPRMP28827 1452 aa10□□□□□ -0.81
BRCA1-230ENST00000634433 HSPA5P11021 654 aaKnown RBP10□□□□□ -0.81
BRCA1-230ENST00000634433 PDIA4P13667 645 aaKnown RBP10□□□□□ -0.81
BRCA1-230ENST00000634433 SAMD1Q6SPF0 538 aaPredicted RBP10□□□□□ -0.81
BRCA1-230ENST00000634433 ABCA9Q8IUA7 1624 aa10□□□□□ -0.81
BRCA1-230ENST00000634433 FAM135AQ9P2D6 1515 aa9.99□□□□□ -0.81
BRCA1-230ENST00000634433 CFAP44Q96MT7 982 aa9.99□□□□□ -0.81
BRCA1-230ENST00000634433 YTHDC1Q96MU7 727 aaKnown RBP9.99□□□□□ -0.81
BRCA1-230ENST00000634433 HIRIP3Q9BW71 556 aaPredicted RBP9.99□□□□□ -0.81
BRCA1-230ENST00000634433 UNC13BO14795 1591 aa9.99□□□□□ -0.81
BRCA1-230ENST00000634433 TRAPPC8Q9Y2L5 1435 aa9.98□□□□□ -0.81
BRCA1-230ENST00000634433 ANP32CO43423 234 aa9.98□□□□□ -0.81
BRCA1-230ENST00000634433 FANCAO15360 1455 aa9.98□□□□□ -0.81
BRCA1-230ENST00000634433 NEO1Q92859 1461 aa9.98□□□□□ -0.81
BRCA1-230ENST00000634433 NBPF8Q3BBV2 869 aa9.97□□□□□ -0.81
BRCA1-230ENST00000634433 TSHZ2Q9NRE2 1034 aa9.97□□□□□ -0.81
BRCA1-230ENST00000634433 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.97□□□□□ -0.811e-6■■■□□ 18.6
BRCA1-230ENST00000634433 BCL11AQ9H165 835 aa9.96□□□□□ -0.81
BRCA1-230ENST00000634433 LMTK3Q96Q04 1460 aa9.96□□□□□ -0.81
BRCA1-230ENST00000634433 UHRF1BP1Q6BDS2 1440 aa9.96□□□□□ -0.82
BRCA1-230ENST00000634433 CFAP74Q9C0B2 1584 aa9.95□□□□□ -0.82
BRCA1-230ENST00000634433 CCER2I3L3R5 266 aa9.95□□□□□ -0.82
BRCA1-230ENST00000634433 AFAP1Q8N556 730 aa9.95□□□□□ -0.82
BRCA1-230ENST00000634433 IQGAP3Q86VI3 1631 aa9.95□□□□□ -0.82
BRCA1-230ENST00000634433 MAGI2Q86UL8 1455 aa9.95□□□□□ -0.82
BRCA1-230ENST00000634433 CCDC144AA2RUR9 1427 aa9.94□□□□□ -0.82
BRCA1-230ENST00000634433 SCAPERQ9BY12 1400 aa9.94□□□□□ -0.82
BRCA1-230ENST00000634433 PAXIP1Q6ZW49 1069 aaPredicted RBP9.94□□□□□ -0.82
BRCA1-230ENST00000634433 MADDQ8WXG6 1647 aa9.93□□□□□ -0.82
BRCA1-230ENST00000634433 MYT1LQ9UL68 1186 aa9.93□□□□□ -0.82
BRCA1-230ENST00000634433 KANK1Q14678 1352 aa9.93□□□□□ -0.82
BRCA1-230ENST00000634433 ATP10AO60312 1499 aa9.93□□□□□ -0.82
BRCA1-230ENST00000634433 ZFYVE16Q7Z3T8 1539 aa9.93□□□□□ -0.82
BRCA1-230ENST00000634433 ARID3AQ99856 593 aa9.92□□□□□ -0.82
BRCA1-230ENST00000634433 SCAF1Q9H7N4 1312 aaKnown RBP9.92□□□□□ -0.82
BRCA1-230ENST00000634433 SPATA31E1Q6ZUB1 1445 aa9.92□□□□□ -0.82
BRCA1-230ENST00000634433 ARHGEF40Q8TER5 1519 aa9.92□□□□□ -0.82
BRCA1-230ENST00000634433 WASHC2AQ641Q2 1341 aa9.92□□□□□ -0.82
BRCA1-230ENST00000634433 ATP7AQ04656 1500 aa9.92□□□□□ -0.82
BRCA1-230ENST00000634433 DHX29Q7Z478 1369 aaKnown RBP9.91□□□□□ -0.82
BRCA1-230ENST00000634433 RIMS1Q86UR5 1692 aaKnown RBP9.91□□□□□ -0.82
BRCA1-230ENST00000634433 ARID4BQ4LE39 1312 aaPredicted RBP9.91□□□□□ -0.82
BRCA1-230ENST00000634433 ZNF326Q5BKZ1 582 aaKnown RBP9.91□□□□□ -0.82
BRCA1-230ENST00000634433 PPP4R3CPQ6ZMV5 832 aa9.91□□□□□ -0.82
BRCA1-230ENST00000634433 DCAF11Q8TEB1 546 aa9.91□□□□□ -0.82
BRCA1-230ENST00000634433 ZNF518AQ6AHZ1 1483 aa9.9□□□□□ -0.82
BRCA1-230ENST00000634433 RALGAPBQ86X10 1494 aa9.9□□□□□ -0.82
BRCA1-230ENST00000634433 POGZQ7Z3K3 1410 aa9.9□□□□□ -0.82
BRCA1-230ENST00000634433 CCDC7Q96M83 1385 aa9.9□□□□□ -0.82
BRCA1-230ENST00000634433 INO80Q9ULG1 1556 aaPredicted RBP9.9□□□□□ -0.82
BRCA1-230ENST00000634433 STAC3Q96MF2 364 aa9.9□□□□□ -0.83
BRCA1-230ENST00000634433 FRMPD1Q5SYB0 1578 aa9.89□□□□□ -0.83
BRCA1-230ENST00000634433 SOCS7O14512 581 aa9.89□□□□□ -0.83
BRCA1-230ENST00000634433 USP47Q96K76 1375 aa9.89□□□□□ -0.83
BRCA1-230ENST00000634433 ZMYM4Q5VZL5 1548 aa9.89□□□□□ -0.83
BRCA1-230ENST00000634433 CARD11Q9BXL7 1154 aa9.89□□□□□ -0.83
BRCA1-230ENST00000634433 PLA2R1Q13018 1463 aa9.89□□□□□ -0.83
BRCA1-230ENST00000634433 IQSEC2Q5JU85 1478 aa9.89□□□□□ -0.83
BRCA1-230ENST00000634433 RICTORQ6R327 1708 aa9.88□□□□□ -0.83
BRCA1-230ENST00000634433 EIF2AK4Q9P2K8 1649 aaKnown RBP9.88□□□□□ -0.83
BRCA1-230ENST00000634433 CNTLNQ9NXG0 1405 aa9.88□□□□□ -0.83
BRCA1-230ENST00000634433 PREX1Q8TCU6 1659 aa9.87□□□□□ -0.83
BRCA1-230ENST00000634433 KIF3BO15066 747 aa9.87□□□□□ -0.83
BRCA1-230ENST00000634433 CERKQ8TCT0 537 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms