RNA–Protein interactions for RNA: ENST00000633371.1

PHACTR4-209, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 3

Gene PHACTR4, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-209ENST00000633371 PZPP20742 1482 aa21.13■□□□□ 0.97
PHACTR4-209ENST00000633371 KDM5DQ9BY66 1539 aa21.12■□□□□ 0.97
PHACTR4-209ENST00000633371 RNF17Q9BXT8 1623 aaKnown RBP21.11■□□□□ 0.97
PHACTR4-209ENST00000633371 VWDEQ8N2E2 1590 aa21.08■□□□□ 0.97
PHACTR4-209ENST00000633371 TRIM52Q96A61 297 aa21.08■□□□□ 0.97
PHACTR4-209ENST00000633371 IQGAP3Q86VI3 1631 aa21.07■□□□□ 0.96
PHACTR4-209ENST00000633371 KIF3BO15066 747 aa21.07■□□□□ 0.96
PHACTR4-209ENST00000633371 AGLP35573 1532 aa21.07■□□□□ 0.96
PHACTR4-209ENST00000633371 PRDM15P57071 1507 aaPredicted RBP21.05■□□□□ 0.96
PHACTR4-209ENST00000633371 NUP155O75694 1391 aa21.05■□□□□ 0.96
PHACTR4-209ENST00000633371 MPHOSPH9Q99550 1183 aa21.04■□□□□ 0.96
PHACTR4-209ENST00000633371 FAM135AQ9P2D6 1515 aa21.04■□□□□ 0.96
PHACTR4-209ENST00000633371 ACIN1Q9UKV3 1341 aaKnown RBP21.04■□□□□ 0.96
PHACTR4-209ENST00000633371 CEP152O94986 1710 aa21.02■□□□□ 0.96
PHACTR4-209ENST00000633371 CCER1Q8TC90 406 aaPredicted RBP21.02■□□□□ 0.96
PHACTR4-209ENST00000633371 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.02■□□□□ 0.961e-8■■■□□ 15.5
PHACTR4-209ENST00000633371 SLC4A1APQ9BWU0 796 aaKnown RBP20.97■□□□□ 0.95
PHACTR4-209ENST00000633371 E9PCH4 1651 aa20.96■□□□□ 0.95
PHACTR4-209ENST00000633371 TET3O43151 1660 aa20.96■□□□□ 0.95
PHACTR4-209ENST00000633371 FOXD1Q16676 465 aa20.96■□□□□ 0.95
PHACTR4-209ENST00000633371 LMTK2Q8IWU2 1503 aa20.95■□□□□ 0.94
PHACTR4-209ENST00000633371 GGT6Q6P531 493 aa20.95■□□□□ 0.94
PHACTR4-209ENST00000633371 ABCC3O15438 1527 aa20.94■□□□□ 0.94
PHACTR4-209ENST00000633371 PKD2Q13563 968 aa20.94■□□□□ 0.94
PHACTR4-209ENST00000633371 CFAP65Q6ZU64 1925 aaKnown RBP20.92■□□□□ 0.94
PHACTR4-209ENST00000633371 ANKRD30BQ9BXX2 1392 aa20.91■□□□□ 0.94
PHACTR4-209ENST00000633371 CLSPNQ9HAW4 1339 aa20.91■□□□□ 0.94
PHACTR4-209ENST00000633371 ZC3H13Q5T200 1668 aaKnown RBP20.9■□□□□ 0.94
PHACTR4-209ENST00000633371 KANK1Q14678 1352 aa20.9■□□□□ 0.94
PHACTR4-209ENST00000633371 CAMSAP1Q5T5Y3 1602 aa20.89■□□□□ 0.94
PHACTR4-209ENST00000633371 EFCAB6Q5THR3 1501 aa20.89■□□□□ 0.94
PHACTR4-209ENST00000633371 PLA2R1Q13018 1463 aa20.88■□□□□ 0.93
PHACTR4-209ENST00000633371 CLTCQ00610 1675 aaKnown RBP20.88■□□□□ 0.93
PHACTR4-209ENST00000633371 SIN3AQ96ST3 1273 aa20.87■□□□□ 0.93
PHACTR4-209ENST00000633371 MLECQ14165 292 aa20.86■□□□□ 0.93
PHACTR4-209ENST00000633371 WASHC2CQ9Y4E1 1318 aa20.84■□□□□ 0.93
PHACTR4-209ENST00000633371 PPP6R1Q9UPN7 881 aa20.84■□□□□ 0.93
PHACTR4-209ENST00000633371 SPHKAPQ2M3C7 1700 aa20.84■□□□□ 0.93
PHACTR4-209ENST00000633371 ARID4BQ4LE39 1312 aaPredicted RBP20.83■□□□□ 0.93
PHACTR4-209ENST00000633371 NPATQ14207 1427 aa20.82■□□□□ 0.92
PHACTR4-209ENST00000633371 PTPRTO14522 1441 aa20.81■□□□□ 0.92
PHACTR4-209ENST00000633371 ARHGAP31Q2M1Z3 1444 aa20.81■□□□□ 0.92
PHACTR4-209ENST00000633371 FER1L4A9Z1Z3 1794 aa20.8■□□□□ 0.92
PHACTR4-209ENST00000633371 ADAMTSL3P82987 1691 aa20.79■□□□□ 0.92
PHACTR4-209ENST00000633371 RPRD2Q5VT52 1461 aaKnown RBP20.78■□□□□ 0.92
PHACTR4-209ENST00000633371 MROH2AA6NES4 1674 aa20.77■□□□□ 0.92
PHACTR4-209ENST00000633371 PREX1Q8TCU6 1659 aa20.77■□□□□ 0.92
PHACTR4-209ENST00000633371 TRPM2O94759 1503 aa20.77■□□□□ 0.92
PHACTR4-209ENST00000633371 CLTCL1P53675 1640 aa20.75■□□□□ 0.91
PHACTR4-209ENST00000633371 NEUROD1Q13562 356 aa20.75■□□□□ 0.91
PHACTR4-209ENST00000633371 NOS1P29475 1434 aa20.75■□□□□ 0.91
PHACTR4-209ENST00000633371 SYNMO15061 1565 aa20.75■□□□□ 0.91
PHACTR4-209ENST00000633371 MADDQ8WXG6 1647 aa20.74■□□□□ 0.91
PHACTR4-209ENST00000633371 ZMYM3Q14202 1370 aa20.72■□□□□ 0.91
PHACTR4-209ENST00000633371 UGGT1Q9NYU2 1555 aa20.72■□□□□ 0.91
PHACTR4-209ENST00000633371 C3P01024 1663 aa20.72■□□□□ 0.91
PHACTR4-209ENST00000633371 CNTLNQ9NXG0 1405 aa20.71■□□□□ 0.91
PHACTR4-209ENST00000633371 FBXO31Q5XUX0 539 aaPredicted RBP20.71■□□□□ 0.91
PHACTR4-209ENST00000633371 PIK3C2BO00750 1634 aa20.71■□□□□ 0.91
PHACTR4-209ENST00000633371 RIMS1Q86UR5 1692 aaKnown RBP20.7■□□□□ 0.91
PHACTR4-209ENST00000633371 ERVK-7P63135 1459 aa20.7■□□□□ 0.9
PHACTR4-209ENST00000633371 SPATA31D1Q6ZQQ2 1576 aa20.69■□□□□ 0.9
PHACTR4-209ENST00000633371 ZEB1P37275 1124 aaPredicted RBP20.67■□□□□ 0.9
PHACTR4-209ENST00000633371 CCDC144AA2RUR9 1427 aa20.67■□□□□ 0.9
PHACTR4-209ENST00000633371 KIF1BO60333 1816 aa20.66■□□□□ 0.9
PHACTR4-209ENST00000633371 MYO5BQ9ULV0 1848 aa20.64■□□□□ 0.9
PHACTR4-209ENST00000633371 SPATA31E1Q6ZUB1 1445 aa20.64■□□□□ 0.89
PHACTR4-209ENST00000633371 ESF1Q9H501 851 aaKnown RBP20.64■□□□□ 0.89
PHACTR4-209ENST00000633371 CEBPAP49715 358 aaPredicted RBP20.63■□□□□ 0.89
PHACTR4-209ENST00000633371 L3MBTL2Q969R5 705 aa20.62■□□□□ 0.89
PHACTR4-209ENST00000633371 TIMELESSQ9UNS1 1208 aa20.61■□□□□ 0.89
PHACTR4-209ENST00000633371 NEURL4Q96JN8 1562 aa20.6■□□□□ 0.89
PHACTR4-209ENST00000633371 IDI1Q13907 227 aa20.59■□□□□ 0.89
PHACTR4-209ENST00000633371 TONSLQ96HA7 1378 aa20.59■□□□□ 0.89
PHACTR4-209ENST00000633371 ADGRB3O60242 1522 aa20.58■□□□□ 0.89
PHACTR4-209ENST00000633371 TMEM131LA2VDJ0 1609 aa20.58■□□□□ 0.89
PHACTR4-209ENST00000633371 PPP1R15AO75807 674 aaPredicted RBP20.57■□□□□ 0.88
PHACTR4-209ENST00000633371 IFT172Q9UG01 1749 aa20.57■□□□□ 0.88
PHACTR4-209ENST00000633371 TNRQ92752 1358 aa20.56■□□□□ 0.88
PHACTR4-209ENST00000633371 SLC52A1Q9NWF4 448 aa20.55■□□□□ 0.88
PHACTR4-209ENST00000633371 KDM4FA0A1W2PPD8 638 aa20.53■□□□□ 0.88
PHACTR4-209ENST00000633371 RGL3Q3MIN7 710 aa20.53■□□□□ 0.88
PHACTR4-209ENST00000633371 PTPRMP28827 1452 aa20.53■□□□□ 0.88
PHACTR4-209ENST00000633371 SETD1BQ9UPS6 1966 aaKnown RBP20.52■□□□□ 0.88
PHACTR4-209ENST00000633371 PPLO60437 1756 aa20.52■□□□□ 0.88
PHACTR4-209ENST00000633371 UBR1Q8IWV7 1749 aa20.5■□□□□ 0.87
PHACTR4-209ENST00000633371 NBPF8Q3BBV2 869 aa20.5■□□□□ 0.87
PHACTR4-209ENST00000633371 PLPPR3Q6T4P5 718 aa20.5■□□□□ 0.87
PHACTR4-209ENST00000633371 KDM5AP29375 1690 aaKnown RBP20.49■□□□□ 0.87
PHACTR4-209ENST00000633371 MYO3AQ8NEV4 1616 aa20.49■□□□□ 0.87
PHACTR4-209ENST00000633371 A2ML1A8K2U0 1454 aa20.48■□□□□ 0.87
PHACTR4-209ENST00000633371 UHRF1BP1Q6BDS2 1440 aa20.47■□□□□ 0.87
PHACTR4-209ENST00000633371 DCAF11Q8TEB1 546 aa20.47■□□□□ 0.87
PHACTR4-209ENST00000633371 NEXMIFQ5QGS0 1516 aa20.47■□□□□ 0.87
PHACTR4-209ENST00000633371 NLRP1Q9C000 1473 aa20.46■□□□□ 0.87
PHACTR4-209ENST00000633371 CHGAP10645 457 aaKnown RBP20.46■□□□□ 0.87
PHACTR4-209ENST00000633371 KDM2AQ9Y2K7 1162 aa20.45■□□□□ 0.86
PHACTR4-209ENST00000633371 ZNF142P52746 1687 aaPredicted RBP20.42■□□□□ 0.86
PHACTR4-209ENST00000633371 PRAG1Q86YV5 1406 aa20.42■□□□□ 0.86
PHACTR4-209ENST00000633371 RPGRIP1LQ68CZ1 1315 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms