RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 RRP12Q5JTH9 1297 aaKnown RBP16.32■□□□□ 0.2
SYNGAP1-208ENST00000629380 WASHC2CQ9Y4E1 1318 aa16.32■□□□□ 0.2
SYNGAP1-208ENST00000629380 TRIM6-TRIM34B2RNG4 842 aa16.31■□□□□ 0.2
SYNGAP1-208ENST00000629380 JPH4Q96JJ6 628 aa16.31■□□□□ 0.2
SYNGAP1-208ENST00000629380 ARID3AQ99856 593 aa16.31■□□□□ 0.2
SYNGAP1-208ENST00000629380 CHMP3Q9Y3E7 222 aa16.3■□□□□ 0.2
SYNGAP1-208ENST00000629380 PTPRGP23470 1445 aa16.3■□□□□ 0.2
SYNGAP1-208ENST00000629380 LMOD3Q0VAK6 560 aa16.3■□□□□ 0.2
SYNGAP1-208ENST00000629380 LRRFIP1Q32MZ4 808 aaKnown RBP16.3■□□□□ 0.2
SYNGAP1-208ENST00000629380 MARCH6O60337 910 aa16.3■□□□□ 0.2
SYNGAP1-208ENST00000629380 B4GALNT3Q6L9W6 998 aa16.3■□□□□ 0.2
SYNGAP1-208ENST00000629380 CCER2I3L3R5 266 aa16.29■□□□□ 0.2
SYNGAP1-208ENST00000629380 CSB-PGBD3P0DP91 1061 aa16.29■□□□□ 0.2
SYNGAP1-208ENST00000629380 RALBP1Q15311 655 aa16.29■□□□□ 0.2
SYNGAP1-208ENST00000629380 TEX35Q5T0J7 233 aa16.29■□□□□ 0.2
SYNGAP1-208ENST00000629380 IPO7O95373 1038 aaKnown RBP16.29■□□□□ 0.2
SYNGAP1-208ENST00000629380 GZF1Q9H116 711 aaPredicted RBP16.29■□□□□ 0.2
SYNGAP1-208ENST00000629380 CREBRFQ8IUR6 639 aa16.28■□□□□ 0.2
SYNGAP1-208ENST00000629380 ANKRD20A12PQ8NF67 263 aa16.28■□□□□ 0.2
SYNGAP1-208ENST00000629380 HOOK1Q9UJC3 728 aaKnown RBP16.28■□□□□ 0.2
SYNGAP1-208ENST00000629380 APBB1O00213 710 aa16.27■□□□□ 0.2
SYNGAP1-208ENST00000629380 PES1O00541 588 aaKnown RBP16.27■□□□□ 0.19
SYNGAP1-208ENST00000629380 RSPH6AQ9H0K4 717 aa16.27■□□□□ 0.19
SYNGAP1-208ENST00000629380 PAK3O75914 559 aaPredicted RBP16.27■□□□□ 0.19
SYNGAP1-208ENST00000629380 SETD5Q9C0A6 1442 aa16.26■□□□□ 0.19
SYNGAP1-208ENST00000629380 H3BQV1 296 aa16.26■□□□□ 0.19
SYNGAP1-208ENST00000629380 IFFO2Q5TF58 517 aa16.26■□□□□ 0.19
SYNGAP1-208ENST00000629380 KIF3BO15066 747 aa16.26■□□□□ 0.19
SYNGAP1-208ENST00000629380 NUP155O75694 1391 aa16.26■□□□□ 0.19
SYNGAP1-208ENST00000629380 GOLGA6L19H0YKK7 550 aa16.26■□□□□ 0.19
SYNGAP1-208ENST00000629380 AKAP17AQ02040 695 aaKnown RBP16.25■□□□□ 0.19
SYNGAP1-208ENST00000629380 SF3A1Q15459 793 aaKnown RBP16.24■□□□□ 0.19
SYNGAP1-208ENST00000629380 ZNF330Q9Y3S2 320 aaPredicted RBP16.24■□□□□ 0.19
SYNGAP1-208ENST00000629380 GAPVD1Q14C86 1478 aa16.24■□□□□ 0.19
SYNGAP1-208ENST00000629380 SLKQ9H2G2 1235 aaPredicted RBP16.24■□□□□ 0.19
SYNGAP1-208ENST00000629380 AMOTL1Q8IY63 956 aa16.24■□□□□ 0.19
SYNGAP1-208ENST00000629380 CCDC9Q9Y3X0 531 aaKnown RBP16.24■□□□□ 0.19
SYNGAP1-208ENST00000629380 RDXP35241 583 aaKnown RBP16.23■□□□□ 0.19
SYNGAP1-208ENST00000629380 CDR1P51861 262 aa16.23■□□□□ 0.19
SYNGAP1-208ENST00000629380 NOM1Q5C9Z4 860 aaKnown RBP16.23■□□□□ 0.19
SYNGAP1-208ENST00000629380 TERF2IPQ9NYB0 399 aa16.23■□□□□ 0.19
SYNGAP1-208ENST00000629380 CYB5RLQ6IPT4 315 aa16.23■□□□□ 0.19
SYNGAP1-208ENST00000629380 RCAN3Q9UKA8 241 aa16.23■□□□□ 0.19
SYNGAP1-208ENST00000629380 HSP90AA2PQ14568 343 aaPredicted RBP16.23■□□□□ 0.19
SYNGAP1-208ENST00000629380 SKOR2Q2VWA4 1001 aaPredicted RBP16.22■□□□□ 0.19
SYNGAP1-208ENST00000629380 AK7Q96M32 723 aa16.22■□□□□ 0.19
SYNGAP1-208ENST00000629380 PKD2Q13563 968 aa16.22■□□□□ 0.19
SYNGAP1-208ENST00000629380 SOX12O15370 315 aa16.22■□□□□ 0.19
SYNGAP1-208ENST00000629380 TRIM34Q9BYJ4 488 aa16.21■□□□□ 0.19
SYNGAP1-208ENST00000629380 STK26Q9P289 416 aa16.21■□□□□ 0.18
SYNGAP1-208ENST00000629380 CNKSR2Q8WXI2 1034 aa16.21■□□□□ 0.18
SYNGAP1-208ENST00000629380 NOL10Q9BSC4 688 aaKnown RBP16.2■□□□□ 0.18
SYNGAP1-208ENST00000629380 SENP3-EIF4A1A0A087X0R7 540 aa16.2■□□□□ 0.18
SYNGAP1-208ENST00000629380 CCAR2Q8N163 923 aaKnown RBP16.19■□□□□ 0.18
SYNGAP1-208ENST00000629380 MFAP1P55081 439 aaKnown RBP16.19■□□□□ 0.18
SYNGAP1-208ENST00000629380 ACBD3Q9H3P7 528 aa16.18■□□□□ 0.18
SYNGAP1-208ENST00000629380 U2AF1L5P0DN76 240 aaPredicted RBP16.18■□□□□ 0.18
SYNGAP1-208ENST00000629380 U2AF1Q01081 240 aaKnown RBP eCLIP16.18■□□□□ 0.18
SYNGAP1-208ENST00000629380 FRAT2O75474 233 aaPredicted RBP16.18■□□□□ 0.18
SYNGAP1-208ENST00000629380 CCDC47Q96A33 483 aaKnown RBP16.18■□□□□ 0.18
SYNGAP1-208ENST00000629380 ANO8Q9HCE9 1232 aaPredicted RBP16.18■□□□□ 0.18
SYNGAP1-208ENST00000629380 SMC4Q9NTJ3 1288 aa16.17■□□□□ 0.18
SYNGAP1-208ENST00000629380 RUFY1Q96T51 708 aa16.17■□□□□ 0.18
SYNGAP1-208ENST00000629380 BECN2A8MW95 431 aa16.17■□□□□ 0.18
SYNGAP1-208ENST00000629380 TOMM22Q9NS69 142 aa16.17■□□□□ 0.18
SYNGAP1-208ENST00000629380 MYO6Q9UM54 1294 aa16.17■□□□□ 0.18
SYNGAP1-208ENST00000629380 NCAPD3P42695 1498 aa16.16■□□□□ 0.18
SYNGAP1-208ENST00000629380 SAFB2Q14151 953 aaKnown RBP eCLIP16.16■□□□□ 0.18
SYNGAP1-208ENST00000629380 DCTN1Q14203 1278 aa16.16■□□□□ 0.18
SYNGAP1-208ENST00000629380 ROCK1Q13464 1354 aa16.16■□□□□ 0.18
SYNGAP1-208ENST00000629380 CTDP1Q9Y5B0 961 aaPredicted RBP16.15■□□□□ 0.18
SYNGAP1-208ENST00000629380 PATL2C9JE40 543 aaKnown RBP16.15■□□□□ 0.18
SYNGAP1-208ENST00000629380 SYNE3Q6ZMZ3 975 aa16.15■□□□□ 0.18
SYNGAP1-208ENST00000629380 MRC2Q9UBG0 1479 aa16.15■□□□□ 0.18
SYNGAP1-208ENST00000629380 NGDNQ8NEJ9 315 aaKnown RBP16.15■□□□□ 0.18
SYNGAP1-208ENST00000629380 FHOD3Q2V2M9 1422 aa16.14■□□□□ 0.17
SYNGAP1-208ENST00000629380 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.14■□□□□ 0.17
SYNGAP1-208ENST00000629380 CENPJQ9HC77 1338 aaPredicted RBP16.13■□□□□ 0.17
SYNGAP1-208ENST00000629380 FGD5Q6ZNL6 1462 aa16.13■□□□□ 0.17
SYNGAP1-208ENST00000629380 ZNF771Q7L3S4 317 aaPredicted RBP16.13■□□□□ 0.17
SYNGAP1-208ENST00000629380 CCDC43Q96MW1 224 aaKnown RBP16.13■□□□□ 0.17
SYNGAP1-208ENST00000629380 FAM184AQ8NB25 1140 aa16.13■□□□□ 0.17
SYNGAP1-208ENST00000629380 GTF2E1P29083 439 aaPredicted RBP16.12■□□□□ 0.17
SYNGAP1-208ENST00000629380 TRIM29Q14134 588 aa16.12■□□□□ 0.17
SYNGAP1-208ENST00000629380 IPO9Q96P70 1041 aaKnown RBP16.12■□□□□ 0.17
SYNGAP1-208ENST00000629380 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.11■□□□□ 0.173e-27■■■■■ 503.1
SYNGAP1-208ENST00000629380 GRIN2BQ13224 1484 aa16.11■□□□□ 0.17
SYNGAP1-208ENST00000629380 CPLX2Q6PUV4 134 aaKnown RBP16.11■□□□□ 0.17
SYNGAP1-208ENST00000629380 HNRNPMP52272 730 aaKnown RBP eCLIP16.11■□□□□ 0.17
SYNGAP1-208ENST00000629380 FAM69CQ0P6D2 419 aa16.11■□□□□ 0.17
SYNGAP1-208ENST00000629380 CUX1P39880 1505 aa16.1■□□□□ 0.17
SYNGAP1-208ENST00000629380 MEX3CQ5U5Q3 659 aaKnown RBP16.1■□□□□ 0.17
SYNGAP1-208ENST00000629380 ARGLU1Q9NWB6 273 aaPredicted RBP16.1■□□□□ 0.17
SYNGAP1-208ENST00000629380 CCDC191Q8NCU4 936 aa16.1■□□□□ 0.17
SYNGAP1-208ENST00000629380 RUFY2Q8WXA3 655 aa16.1■□□□□ 0.17
SYNGAP1-208ENST00000629380 RBM19Q9Y4C8 960 aaKnown RBP16.1■□□□□ 0.17
SYNGAP1-208ENST00000629380 VGFO15240 615 aaPredicted RBP16.1■□□□□ 0.17
SYNGAP1-208ENST00000629380 ODF2Q5BJF6 829 aa16.1■□□□□ 0.17
SYNGAP1-208ENST00000629380 PCMTD1Q96MG8 357 aaPredicted RBP16.09■□□□□ 0.17
SYNGAP1-208ENST00000629380 CT47A1Q5JQC4 288 aaPredicted RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms