RNA–Protein interactions for RNA: ENST00000629219.1

PKP4-218, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-218ENST00000629219 RNF17Q9BXT8 1623 aaKnown RBP14.21□□□□□ -0.13
PKP4-218ENST00000629219 FGD6Q6ZV73 1430 aa14.21□□□□□ -0.13
PKP4-218ENST00000629219 DNMT1P26358 1616 aaKnown RBP14.2□□□□□ -0.14
PKP4-218ENST00000629219 ZMYM3Q14202 1370 aa14.2□□□□□ -0.14
PKP4-218ENST00000629219 KDM5DQ9BY66 1539 aa14.2□□□□□ -0.14
PKP4-218ENST00000629219 DMRT2Q9Y5R5 561 aa14.19□□□□□ -0.14
PKP4-218ENST00000629219 ZNF142P52746 1687 aaPredicted RBP14.19□□□□□ -0.14
PKP4-218ENST00000629219 ZC3H13Q5T200 1668 aaKnown RBP14.19□□□□□ -0.14
PKP4-218ENST00000629219 DUOX2Q9NRD8 1548 aa14.18□□□□□ -0.14
PKP4-218ENST00000629219 ABCC5O15440 1437 aa14.16□□□□□ -0.14
PKP4-218ENST00000629219 PTPRKQ15262 1439 aa14.16□□□□□ -0.14
PKP4-218ENST00000629219 MYO3AQ8NEV4 1616 aa14.15□□□□□ -0.14
PKP4-218ENST00000629219 DAPK1P53355 1430 aa14.15□□□□□ -0.14
PKP4-218ENST00000629219 ERBINQ96RT1 1412 aa14.15□□□□□ -0.14
PKP4-218ENST00000629219 PZPP20742 1482 aa14.14□□□□□ -0.15
PKP4-218ENST00000629219 GGT6Q6P531 493 aa14.14□□□□□ -0.15
PKP4-218ENST00000629219 LTBP4Q8N2S1 1624 aa14.14□□□□□ -0.15
PKP4-218ENST00000629219 PTPRTO14522 1441 aa14.14□□□□□ -0.15
PKP4-218ENST00000629219 MROH1Q8NDA8 1641 aa14.13□□□□□ -0.15
PKP4-218ENST00000629219 KIF3BO15066 747 aa14.13□□□□□ -0.15
PKP4-218ENST00000629219 ADGRL2O95490 1459 aa14.12□□□□□ -0.15
PKP4-218ENST00000629219 PRDM15P57071 1507 aaPredicted RBP14.12□□□□□ -0.15
PKP4-218ENST00000629219 CEP170BQ9Y4F5 1589 aaPredicted RBP14.12□□□□□ -0.15
PKP4-218ENST00000629219 PLA2R1Q13018 1463 aa14.12□□□□□ -0.15
PKP4-218ENST00000629219 DEPDC5O75140 1603 aa14.12□□□□□ -0.15
PKP4-218ENST00000629219 NCOA1Q15788 1441 aa14.11□□□□□ -0.15
PKP4-218ENST00000629219 ABCC3O15438 1527 aa14.1□□□□□ -0.15
PKP4-218ENST00000629219 KIF15Q9NS87 1388 aa14.1□□□□□ -0.15
PKP4-218ENST00000629219 SPATA31D1Q6ZQQ2 1576 aa14.1□□□□□ -0.15
PKP4-218ENST00000629219 ANKRD30AQ9BXX3 1397 aa14.09□□□□□ -0.15
PKP4-218ENST00000629219 A2ML1A8K2U0 1454 aa14.08□□□□□ -0.16
PKP4-218ENST00000629219 NCKAP5LQ9HCH0 1330 aa14.08□□□□□ -0.16
PKP4-218ENST00000629219 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.08□□□□□ -0.16
PKP4-218ENST00000629219 WASHC2CQ9Y4E1 1318 aa14.07□□□□□ -0.16
PKP4-218ENST00000629219 CAMSAP1Q5T5Y3 1602 aa14.07□□□□□ -0.16
PKP4-218ENST00000629219 ARHGAP31Q2M1Z3 1444 aa14.07□□□□□ -0.16
PKP4-218ENST00000629219 NLRP1Q9C000 1473 aa14.06□□□□□ -0.16
PKP4-218ENST00000629219 LMTK2Q8IWU2 1503 aa14.05□□□□□ -0.16
PKP4-218ENST00000629219 VWDEQ8N2E2 1590 aa14.05□□□□□ -0.16
PKP4-218ENST00000629219 ZNF335Q9H4Z2 1342 aaPredicted RBP14.05□□□□□ -0.16
PKP4-218ENST00000629219 TNRQ92752 1358 aa14.05□□□□□ -0.16
PKP4-218ENST00000629219 CEP152O94986 1710 aa14.04□□□□□ -0.16
PKP4-218ENST00000629219 PKD2Q13563 968 aa14.03□□□□□ -0.16
PKP4-218ENST00000629219 ERVK-7P63135 1459 aa14.02□□□□□ -0.16
PKP4-218ENST00000629219 ROCK1Q13464 1354 aa14.02□□□□□ -0.17
PKP4-218ENST00000629219 POLR1AO95602 1720 aaPredicted RBP14.01□□□□□ -0.17
PKP4-218ENST00000629219 IQSEC2Q5JU85 1478 aa14.01□□□□□ -0.17
PKP4-218ENST00000629219 UBAP1LF5GYI3 381 aa14.01□□□□□ -0.17
PKP4-218ENST00000629219 KANK1Q14678 1352 aa14□□□□□ -0.17
PKP4-218ENST00000629219 RRP7BPQ9NSQ0 103 aa14□□□□□ -0.17
PKP4-218ENST00000629219 KDM5AP29375 1690 aaKnown RBP13.99□□□□□ -0.17
PKP4-218ENST00000629219 ANKRD50Q9ULJ7 1429 aa13.98□□□□□ -0.17
PKP4-218ENST00000629219 UNC13BO14795 1591 aa13.97□□□□□ -0.17
PKP4-218ENST00000629219 UGGT1Q9NYU2 1555 aa13.97□□□□□ -0.17
PKP4-218ENST00000629219 EFCAB6Q5THR3 1501 aa13.97□□□□□ -0.17
PKP4-218ENST00000629219 FBXO31Q5XUX0 539 aaPredicted RBP13.97□□□□□ -0.17
PKP4-218ENST00000629219 MED14O60244 1454 aa13.96□□□□□ -0.17
PKP4-218ENST00000629219 RPRD2Q5VT52 1461 aaKnown RBP13.96□□□□□ -0.17
PKP4-218ENST00000629219 FAM50AQ14320 339 aaKnown RBP13.96□□□□□ -0.17
PKP4-218ENST00000629219 RRBP1Q9P2E9 1410 aaKnown RBP13.96□□□□□ -0.18
PKP4-218ENST00000629219 NEURL4Q96JN8 1562 aa13.96□□□□□ -0.18
PKP4-218ENST00000629219 UBR1Q8IWV7 1749 aa13.95□□□□□ -0.18
PKP4-218ENST00000629219 THEMISQ8N1K5 641 aaPredicted RBP13.95□□□□□ -0.18
PKP4-218ENST00000629219 TET3O43151 1660 aa13.95□□□□□ -0.18
PKP4-218ENST00000629219 CFAP65Q6ZU64 1925 aaKnown RBP13.94□□□□□ -0.18
PKP4-218ENST00000629219 CHIC2Q9UKJ5 165 aa13.93□□□□□ -0.18
PKP4-218ENST00000629219 GCC2Q8IWJ2 1684 aa13.93□□□□□ -0.18
PKP4-218ENST00000629219 NOS1P29475 1434 aa13.92□□□□□ -0.18
PKP4-218ENST00000629219 SLIT1O75093 1534 aa13.92□□□□□ -0.18
PKP4-218ENST00000629219 HSPA1LP34931 641 aa13.92□□□□□ -0.18
PKP4-218ENST00000629219 IQGAP3Q86VI3 1631 aa13.91□□□□□ -0.18
PKP4-218ENST00000629219 ARHGAP23Q9P227 1491 aa13.91□□□□□ -0.18
PKP4-218ENST00000629219 IQGAP1P46940 1657 aa13.89□□□□□ -0.19
PKP4-218ENST00000629219 SYNMO15061 1565 aa13.89□□□□□ -0.19
PKP4-218ENST00000629219 PIP4K2BP78356 416 aa13.89□□□□□ -0.19
PKP4-218ENST00000629219 ANKLE2Q86XL3 938 aa13.89□□□□□ -0.19
PKP4-218ENST00000629219 SCAF1Q9H7N4 1312 aaKnown RBP13.89□□□□□ -0.19
PKP4-218ENST00000629219 PIK3C2BO00750 1634 aa13.88□□□□□ -0.19
PKP4-218ENST00000629219 CPS1P31327 1500 aa13.88□□□□□ -0.19
PKP4-218ENST00000629219 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.87□□□□□ -0.196e-8■■□□□ 12.2
PKP4-218ENST00000629219 NPHP4O75161 1426 aaPredicted RBP13.87□□□□□ -0.19
PKP4-218ENST00000629219 SCAF11Q99590 1463 aaKnown RBP13.86□□□□□ -0.19
PKP4-218ENST00000629219 ADGRB3O60242 1522 aa13.85□□□□□ -0.19
PKP4-218ENST00000629219 SLC52A1Q9NWF4 448 aa13.85□□□□□ -0.19
PKP4-218ENST00000629219 MED1Q15648 1581 aaPredicted RBP13.84□□□□□ -0.19
PKP4-218ENST00000629219 E9PCH4 1651 aa13.84□□□□□ -0.19
PKP4-218ENST00000629219 TMEM2Q9UHN6 1383 aa13.83□□□□□ -0.2
PKP4-218ENST00000629219 TOM1O60784 492 aa13.81□□□□□ -0.2
PKP4-218ENST00000629219 SENP3Q9H4L4 574 aaPredicted RBP13.81□□□□□ -0.2
PKP4-218ENST00000629219 ALKQ9UM73 1620 aa13.8□□□□□ -0.2
PKP4-218ENST00000629219 IDI1Q13907 227 aa13.8□□□□□ -0.2
PKP4-218ENST00000629219 HFM1A2PYH4 1435 aa13.8□□□□□ -0.2
PKP4-218ENST00000629219 NAIPQ13075 1403 aa13.8□□□□□ -0.2
PKP4-218ENST00000629219 TMEM131LA2VDJ0 1609 aa13.79□□□□□ -0.2
PKP4-218ENST00000629219 EID1Q9Y6B2 187 aa13.78□□□□□ -0.2
PKP4-218ENST00000629219 NUP155O75694 1391 aa13.78□□□□□ -0.2
PKP4-218ENST00000629219 SPHKAPQ2M3C7 1700 aa13.77□□□□□ -0.21
PKP4-218ENST00000629219 MYO5BQ9ULV0 1848 aa13.76□□□□□ -0.21
PKP4-218ENST00000629219 ZFYVE9O95405 1425 aa13.76□□□□□ -0.21
PKP4-218ENST00000629219 LTKP29376 864 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms