RNA–Protein interactions for RNA: ENST00000628729.2

PDCD6-214, Transcript of programmed cell death 6, humanhuman

TSL 5 BASIC

Gene PDCD6, Length 1,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-214ENST00000628729 KIF3BO15066 747 aa26.29■■□□□ 1.8
PDCD6-214ENST00000628729 RSPH4AQ5TD94 716 aa26.29■■□□□ 1.8
PDCD6-214ENST00000628729 MIA2Q96PC5 1412 aa26.28■■□□□ 1.8
PDCD6-214ENST00000628729 PLA2R1Q13018 1463 aa26.28■■□□□ 1.8
PDCD6-214ENST00000628729 TCOF1Q13428 1488 aaKnown RBP26.28■■□□□ 1.8
PDCD6-214ENST00000628729 PZPP20742 1482 aa26.27■■□□□ 1.8
PDCD6-214ENST00000628729 DNMT1P26358 1616 aaKnown RBP26.27■■□□□ 1.8
PDCD6-214ENST00000628729 MROH1Q8NDA8 1641 aa26.27■■□□□ 1.8
PDCD6-214ENST00000628729 CROCC2H7BZ55 1655 aa26.26■■□□□ 1.79
PDCD6-214ENST00000628729 EIF2AK4Q9P2K8 1649 aaKnown RBP26.25■■□□□ 1.79
PDCD6-214ENST00000628729 A2ML1A8K2U0 1454 aa26.24■■□□□ 1.79
PDCD6-214ENST00000628729 NCKAP5LQ9HCH0 1330 aa26.23■■□□□ 1.79
PDCD6-214ENST00000628729 ABCC3O15438 1527 aa26.21■■□□□ 1.79
PDCD6-214ENST00000628729 FBXO31Q5XUX0 539 aaPredicted RBP26.21■■□□□ 1.79
PDCD6-214ENST00000628729 ZC3H13Q5T200 1668 aaKnown RBP26.21■■□□□ 1.79
PDCD6-214ENST00000628729 PTPN23Q9H3S7 1636 aa26.21■■□□□ 1.79
PDCD6-214ENST00000628729 TSPY4P0CV99 314 aa26.2■■□□□ 1.78
PDCD6-214ENST00000628729 TSPY10P0CW01 314 aa26.2■■□□□ 1.78
PDCD6-214ENST00000628729 TNRQ92752 1358 aa26.19■■□□□ 1.78
PDCD6-214ENST00000628729 POLR1AO95602 1720 aaPredicted RBP26.18■■□□□ 1.78
PDCD6-214ENST00000628729 NEURL4Q96JN8 1562 aa26.18■■□□□ 1.78
PDCD6-214ENST00000628729 CEP152O94986 1710 aa26.17■■□□□ 1.78
PDCD6-214ENST00000628729 SHANK2Q9UPX8 1470 aa26.16■■□□□ 1.78
PDCD6-214ENST00000628729 WASHC2CQ9Y4E1 1318 aa26.15■■□□□ 1.78
PDCD6-214ENST00000628729 ABCC5O15440 1437 aa26.14■■□□□ 1.78
PDCD6-214ENST00000628729 DUOX2Q9NRD8 1548 aa26.14■■□□□ 1.77
PDCD6-214ENST00000628729 IQSEC2Q5JU85 1478 aa26.13■■□□□ 1.77
PDCD6-214ENST00000628729 ZNF335Q9H4Z2 1342 aaPredicted RBP26.13■■□□□ 1.77
PDCD6-214ENST00000628729 SPATA31D1Q6ZQQ2 1576 aa26.12■■□□□ 1.77
PDCD6-214ENST00000628729 PKD2Q13563 968 aa26.12■■□□□ 1.77
PDCD6-214ENST00000628729 FGD6Q6ZV73 1430 aa26.12■■□□□ 1.77
PDCD6-214ENST00000628729 PRDM15P57071 1507 aaPredicted RBP26.1■■□□□ 1.77
PDCD6-214ENST00000628729 DAPK1P53355 1430 aa26.09■■□□□ 1.77
PDCD6-214ENST00000628729 NLRP1Q9C000 1473 aa26.09■■□□□ 1.77
PDCD6-214ENST00000628729 KIF15Q9NS87 1388 aa26.07■■□□□ 1.76
PDCD6-214ENST00000628729 DEPDC5O75140 1603 aa26.07■■□□□ 1.76
PDCD6-214ENST00000628729 ERVK-7P63135 1459 aa26.07■■□□□ 1.76
PDCD6-214ENST00000628729 SENP3Q9H4L4 574 aaPredicted RBP26.07■■□□□ 1.76
PDCD6-214ENST00000628729 UGGT1Q9NYU2 1555 aa26.07■■□□□ 1.76
PDCD6-214ENST00000628729 ERBINQ96RT1 1412 aa26.05■■□□□ 1.76
PDCD6-214ENST00000628729 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.03■■□□□ 1.762e-7■■■■■ 43.8
PDCD6-214ENST00000628729 APLP2Q06481 763 aa26.01■■□□□ 1.75
PDCD6-214ENST00000628729 UBR1Q8IWV7 1749 aa25.99■■□□□ 1.75
PDCD6-214ENST00000628729 RRP7BPQ9NSQ0 103 aa25.98■■□□□ 1.75
PDCD6-214ENST00000628729 VWDEQ8N2E2 1590 aa25.98■■□□□ 1.75
PDCD6-214ENST00000628729 CFAP65Q6ZU64 1925 aaKnown RBP25.98■■□□□ 1.75
PDCD6-214ENST00000628729 MED14O60244 1454 aa25.97■■□□□ 1.75
PDCD6-214ENST00000628729 IQGAP1P46940 1657 aa25.95■■□□□ 1.74
PDCD6-214ENST00000628729 ARHGAP31Q2M1Z3 1444 aa25.94■■□□□ 1.74
PDCD6-214ENST00000628729 ADGRL2O95490 1459 aa25.92■■□□□ 1.74
PDCD6-214ENST00000628729 NPHP4O75161 1426 aaPredicted RBP25.92■■□□□ 1.74
PDCD6-214ENST00000628729 THEMISQ8N1K5 641 aaPredicted RBP25.92■■□□□ 1.74
PDCD6-214ENST00000628729 PHF23Q9BUL5 403 aaPredicted RBP25.91■■□□□ 1.74
PDCD6-214ENST00000628729 CPS1P31327 1500 aa25.9■■□□□ 1.74
PDCD6-214ENST00000628729 STRCP1A6NGW2 1772 aa25.9■■□□□ 1.74
PDCD6-214ENST00000628729 LMTK2Q8IWU2 1503 aa25.89■■□□□ 1.74
PDCD6-214ENST00000628729 ANKLE2Q86XL3 938 aa25.89■■□□□ 1.74
PDCD6-214ENST00000628729 CHIC2Q9UKJ5 165 aa25.89■■□□□ 1.74
PDCD6-214ENST00000628729 PIK3C2BO00750 1634 aa25.88■■□□□ 1.73
PDCD6-214ENST00000628729 ANKRD30AQ9BXX3 1397 aa25.88■■□□□ 1.73
PDCD6-214ENST00000628729 SYNMO15061 1565 aa25.86■■□□□ 1.73
PDCD6-214ENST00000628729 ARHGAP23Q9P227 1491 aa25.85■■□□□ 1.73
PDCD6-214ENST00000628729 EFCAB6Q5THR3 1501 aa25.85■■□□□ 1.73
PDCD6-214ENST00000628729 SLIT1O75093 1534 aa25.84■■□□□ 1.73
PDCD6-214ENST00000628729 UBAP1LF5GYI3 381 aa25.84■■□□□ 1.73
PDCD6-214ENST00000628729 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.84■■□□□ 1.739e-7■■■■□ 21.2
PDCD6-214ENST00000628729 ALKQ9UM73 1620 aa25.83■■□□□ 1.73
PDCD6-214ENST00000628729 SCAF11Q99590 1463 aaKnown RBP25.81■■□□□ 1.72
PDCD6-214ENST00000628729 KDM5AP29375 1690 aaKnown RBP25.79■■□□□ 1.72
PDCD6-214ENST00000628729 KANK1Q14678 1352 aa25.79■■□□□ 1.72
PDCD6-214ENST00000628729 FAM50AQ14320 339 aaKnown RBP25.78■■□□□ 1.72
PDCD6-214ENST00000628729 DISP3Q9P2K9 1392 aa25.76■■□□□ 1.71
PDCD6-214ENST00000628729 NOS1P29475 1434 aa25.75■■□□□ 1.71
PDCD6-214ENST00000628729 LTKP29376 864 aa25.75■■□□□ 1.71
PDCD6-214ENST00000628729 ANKRD50Q9ULJ7 1429 aa25.74■■□□□ 1.71
PDCD6-214ENST00000628729 UNC13BO14795 1591 aa25.73■■□□□ 1.71
PDCD6-214ENST00000628729 LRRC7Q96NW7 1537 aa25.73■■□□□ 1.71
PDCD6-214ENST00000628729 ADGRB3O60242 1522 aa25.72■■□□□ 1.71
PDCD6-214ENST00000628729 TET3O43151 1660 aa25.71■■□□□ 1.71
PDCD6-214ENST00000628729 TMEM2Q9UHN6 1383 aa25.7■■□□□ 1.71
PDCD6-214ENST00000628729 ILDR2Q71H61 639 aa25.69■■□□□ 1.7
PDCD6-214ENST00000628729 XIRP1Q702N8 1843 aaKnown RBP25.69■■□□□ 1.7
PDCD6-214ENST00000628729 GCC2Q8IWJ2 1684 aa25.68■■□□□ 1.7
PDCD6-214ENST00000628729 IDI1Q13907 227 aa25.67■■□□□ 1.7
PDCD6-214ENST00000628729 RPRD2Q5VT52 1461 aaKnown RBP25.66■■□□□ 1.7
PDCD6-214ENST00000628729 TXNDC2Q86VQ3 553 aa25.66■■□□□ 1.7
PDCD6-214ENST00000628729 MYO5BQ9ULV0 1848 aa25.65■■□□□ 1.7
PDCD6-214ENST00000628729 PIP4K2BP78356 416 aa25.64■■□□□ 1.7
PDCD6-214ENST00000628729 E9PCH4 1651 aa25.63■■□□□ 1.69
PDCD6-214ENST00000628729 ROCK1Q13464 1354 aa25.62■■□□□ 1.69
PDCD6-214ENST00000628729 IQGAP3Q86VI3 1631 aa25.62■■□□□ 1.69
PDCD6-214ENST00000628729 SCAF1Q9H7N4 1312 aaKnown RBP25.62■■□□□ 1.69
PDCD6-214ENST00000628729 TOM1O60784 492 aa25.61■■□□□ 1.69
PDCD6-214ENST00000628729 HSPA1LP34931 641 aa25.61■■□□□ 1.69
PDCD6-214ENST00000628729 TMEM131LA2VDJ0 1609 aa25.59■■□□□ 1.69
PDCD6-214ENST00000628729 PPARGC1BQ86YN6 1023 aaKnown RBP25.58■■□□□ 1.69
PDCD6-214ENST00000628729 EID1Q9Y6B2 187 aa25.58■■□□□ 1.69
PDCD6-214ENST00000628729 STAG3Q9UJ98 1225 aa25.57■■□□□ 1.68
PDCD6-214ENST00000628729 ZFYVE9O95405 1425 aa25.56■■□□□ 1.68
PDCD6-214ENST00000628729 MED1Q15648 1581 aaPredicted RBP25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms