RNA–Protein interactions for RNA: ENST00000628181.1

CHD2-214, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-214ENST00000628181 ZDHHC16Q969W1 377 aa9.38□□□□□ -0.91
CHD2-214ENST00000628181 ZBED2Q9BTP6 218 aa9.38□□□□□ -0.91
CHD2-214ENST00000628181 ADAM33Q9BZ11 813 aa9.38□□□□□ -0.91
CHD2-214ENST00000628181 THOC2Q8NI27 1593 aaKnown RBP9.37□□□□□ -0.91
CHD2-214ENST00000628181 NESP48681 1621 aa9.35□□□□□ -0.91
CHD2-214ENST00000628181 PCDHGA10Q9Y5H3 936 aa9.33□□□□□ -0.92
CHD2-214ENST00000628181 PTPN5P54829 565 aa9.32□□□□□ -0.92
CHD2-214ENST00000628181 ATAD2BQ9ULI0 1458 aa9.31□□□□□ -0.92
CHD2-214ENST00000628181 HMGXB3Q12766 1538 aa9.31□□□□□ -0.92
CHD2-214ENST00000628181 CAMK2BQ13554 666 aa9.29□□□□□ -0.92
CHD2-214ENST00000628181 THSD4Q6ZMP0 1018 aa9.29□□□□□ -0.92
CHD2-214ENST00000628181 MRPL50Q8N5N7 158 aaKnown RBP9.29□□□□□ -0.92
CHD2-214ENST00000628181 PPP1R3GB7ZBB8 358 aa9.28□□□□□ -0.92
CHD2-214ENST00000628181 GOLGA8CPA6NN73 597 aa9.27□□□□□ -0.93
CHD2-214ENST00000628181 PHF14O94880 888 aa9.27□□□□□ -0.93
CHD2-214ENST00000628181 COL9A1P20849 921 aa9.27□□□□□ -0.93
CHD2-214ENST00000628181 TYW1BQ6NUM6 668 aa9.27□□□□□ -0.93
CHD2-214ENST00000628181 WNT2BQ93097 391 aa9.27□□□□□ -0.93
CHD2-214ENST00000628181 SMARCA2P51531 1590 aa9.27□□□□□ -0.93
CHD2-214ENST00000628181 LAMC3Q9Y6N6 1575 aa9.27□□□□□ -0.93
CHD2-214ENST00000628181 FBXW7Q969H0 707 aa9.26□□□□□ -0.93
CHD2-214ENST00000628181 NBPF3Q9H094 633 aa9.26□□□□□ -0.93
CHD2-214ENST00000628181 PROX2Q3B8N5 592 aa9.25□□□□□ -0.93
CHD2-214ENST00000628181 BBXQ8WY36 941 aaPredicted RBP9.25□□□□□ -0.93
CHD2-214ENST00000628181 DPYSL4O14531 572 aa9.24□□□□□ -0.93
CHD2-214ENST00000628181 RABGEF1Q9UJ41 708 aa9.24□□□□□ -0.93
CHD2-214ENST00000628181 KIF21AQ7Z4S6 1674 aa9.23□□□□□ -0.93
CHD2-214ENST00000628181 IFFO2Q5TF58 517 aa9.22□□□□□ -0.93
CHD2-214ENST00000628181 EPAS1Q99814 870 aa9.22□□□□□ -0.93
CHD2-214ENST00000628181 PDS5BQ9NTI5 1447 aa9.22□□□□□ -0.93
CHD2-214ENST00000628181 BAZ1AQ9NRL2 1556 aaPredicted RBP9.21□□□□□ -0.93
CHD2-214ENST00000628181 C6orf132Q5T0Z8 1188 aa9.21□□□□□ -0.94
CHD2-214ENST00000628181 BAZ1BQ9UIG0 1483 aaKnown RBP9.2□□□□□ -0.94
CHD2-214ENST00000628181 KIAA1468Q9P260 1216 aa9.19□□□□□ -0.94
CHD2-214ENST00000628181 SMARCA4P51532 1647 aa9.19□□□□□ -0.94
CHD2-214ENST00000628181 ONECUT3O60422 494 aaPredicted RBP9.18□□□□□ -0.94
CHD2-214ENST00000628181 LAPTM4BQ86VI4 370 aa9.17□□□□□ -0.94
CHD2-214ENST00000628181 ANKK1Q8NFD2 765 aa9.17□□□□□ -0.94
CHD2-214ENST00000628181 DDX12PQ92771 950 aa9.17□□□□□ -0.94
CHD2-214ENST00000628181 MRC2Q9UBG0 1479 aa9.16□□□□□ -0.94
CHD2-214ENST00000628181 SPRYD3Q8NCJ5 442 aa9.16□□□□□ -0.94
CHD2-214ENST00000628181 RBM33Q96EV2 1170 aaKnown RBP9.16□□□□□ -0.94
CHD2-214ENST00000628181 WDR62O43379 1518 aa9.15□□□□□ -0.94
CHD2-214ENST00000628181 SOWAHBA6NEL2 793 aa9.14□□□□□ -0.95
CHD2-214ENST00000628181 BCAMP50895 628 aa9.14□□□□□ -0.95
CHD2-214ENST00000628181 ZFRQ96KR1 1074 aaKnown RBP9.14□□□□□ -0.95
CHD2-214ENST00000628181 A0A0G2JS52 829 aa9.13□□□□□ -0.95
CHD2-214ENST00000628181 TRIM6-TRIM34B2RNG4 842 aa9.13□□□□□ -0.95
CHD2-214ENST00000628181 PDIA6Q15084 440 aa9.13□□□□□ -0.95
CHD2-214ENST00000628181 SEPT9Q9UHD8 586 aaPredicted RBP9.13□□□□□ -0.95
CHD2-214ENST00000628181 PEG3Q9GZU2 1588 aa9.12□□□□□ -0.95
CHD2-214ENST00000628181 RGS20O76081 388 aa9.12□□□□□ -0.95
CHD2-214ENST00000628181 EN1Q05925 392 aaPredicted RBP9.11□□□□□ -0.95
CHD2-214ENST00000628181 RIMBP3CA6NJZ7 1639 aa9.1□□□□□ -0.95
CHD2-214ENST00000628181 RIMBP3BA6NNM3 1639 aa9.1□□□□□ -0.95
CHD2-214ENST00000628181 RIMBP3Q9UFD9 1639 aa9.1□□□□□ -0.95
CHD2-214ENST00000628181 SPDYE16A6NNV3 312 aaPredicted RBP9.1□□□□□ -0.95
CHD2-214ENST00000628181 ITGBL1O95965 494 aaPredicted RBP9.1□□□□□ -0.95
CHD2-214ENST00000628181 NBR1Q14596 966 aa9.1□□□□□ -0.95
CHD2-214ENST00000628181 TSR1Q2NL82 804 aaKnown RBP9.1□□□□□ -0.95
CHD2-214ENST00000628181 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.1□□□□□ -0.95
CHD2-214ENST00000628181 FAM98CQ17RN3 349 aaKnown RBP9.09□□□□□ -0.95
CHD2-214ENST00000628181 WBP1LQ9NX94 342 aa9.09□□□□□ -0.95
CHD2-214ENST00000628181 CADPSQ9ULU8 1353 aa9.09□□□□□ -0.95
CHD2-214ENST00000628181 MAP3K7O43318 606 aa9.08□□□□□ -0.96
CHD2-214ENST00000628181 E2F4Q16254 413 aa9.08□□□□□ -0.96
CHD2-214ENST00000628181 TSKSQ9UJT2 592 aa9.08□□□□□ -0.96
CHD2-214ENST00000628181 AMER1Q5JTC6 1135 aaPredicted RBP9.07□□□□□ -0.96
CHD2-214ENST00000628181 NYAP1Q6ZVC0 841 aa9.07□□□□□ -0.96
CHD2-214ENST00000628181 ARIH1Q9Y4X5 557 aaPredicted RBP9.07□□□□□ -0.96
CHD2-214ENST00000628181 PRIM1P49642 420 aaKnown RBP9.06□□□□□ -0.96
CHD2-214ENST00000628181 PAXIP1Q6ZW49 1069 aaPredicted RBP9.06□□□□□ -0.96
CHD2-214ENST00000628181 CFAP44Q96MT7 982 aa9.05□□□□□ -0.96
CHD2-214ENST00000628181 ARHGEF11O15085 1522 aa9.05□□□□□ -0.96
CHD2-214ENST00000628181 CEP164Q9UPV0 1460 aa9.04□□□□□ -0.96
CHD2-214ENST00000628181 PACS2Q86VP3 889 aa9.04□□□□□ -0.96
CHD2-214ENST00000628181 RTN4Q9NQC3 1192 aaKnown RBP9.04□□□□□ -0.96
CHD2-214ENST00000628181 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.04□□□□□ -0.96
CHD2-214ENST00000628181 LRCH3Q96II8 777 aa9.03□□□□□ -0.96
CHD2-214ENST00000628181 FAM198AQ9UFP1 575 aa9.03□□□□□ -0.96
CHD2-214ENST00000628181 TSR3Q9UJK0 312 aaKnown RBP9.03□□□□□ -0.96
CHD2-214ENST00000628181 CDCA7LQ96GN5 454 aa9.02□□□□□ -0.97
CHD2-214ENST00000628181 WDR70Q9NW82 654 aa9.02□□□□□ -0.97
CHD2-214ENST00000628181 HPS5Q9UPZ3 1129 aa9.02□□□□□ -0.97
CHD2-214ENST00000628181 GRXCR2A6NFK2 248 aa9.01□□□□□ -0.97
CHD2-214ENST00000628181 PRSS12P56730 875 aa9.01□□□□□ -0.97
CHD2-214ENST00000628181 C3orf80F5H4A9 247 aa9□□□□□ -0.97
CHD2-214ENST00000628181 SMAPO00193 183 aa9□□□□□ -0.97
CHD2-214ENST00000628181 KCNC4Q03721 635 aa9□□□□□ -0.97
CHD2-214ENST00000628181 IRX2Q9BZI1 471 aaPredicted RBP9□□□□□ -0.97
CHD2-214ENST00000628181 OSBPP22059 807 aa8.99□□□□□ -0.97
CHD2-214ENST00000628181 CERKQ8TCT0 537 aa8.99□□□□□ -0.97
CHD2-214ENST00000628181 FANCD2Q9BXW9 1451 aa8.99□□□□□ -0.97
CHD2-214ENST00000628181 CYB5RLQ6IPT4 315 aa8.97□□□□□ -0.97
CHD2-214ENST00000628181 MROH2BQ7Z745 1585 aa8.97□□□□□ -0.97
CHD2-214ENST00000628181 PPP4CP60510 307 aa8.96□□□□□ -0.98
CHD2-214ENST00000628181 SAMD7Q7Z3H4 446 aa8.96□□□□□ -0.98
CHD2-214ENST00000628181 TATDN2Q93075 761 aa8.96□□□□□ -0.98
CHD2-214ENST00000628181 CDHR5Q9HBB8 845 aa8.96□□□□□ -0.98
CHD2-214ENST00000628181 PNMA3Q9UL41 463 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms