RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 MROH2AA6NES4 1674 aa16.81■□□□□ 0.28
SSBP4-215ENST00000625926 MAST1Q9Y2H9 1570 aa16.8■□□□□ 0.28
SSBP4-215ENST00000625926 PTPRTO14522 1441 aa16.79■□□□□ 0.28
SSBP4-215ENST00000625926 CLTCQ00610 1675 aaKnown RBP16.78■□□□□ 0.28
SSBP4-215ENST00000625926 FAM135AQ9P2D6 1515 aa16.78■□□□□ 0.28
SSBP4-215ENST00000625926 TCOF1Q13428 1488 aaKnown RBP16.78■□□□□ 0.28
SSBP4-215ENST00000625926 NCOA1Q15788 1441 aa16.78■□□□□ 0.28
SSBP4-215ENST00000625926 KIF15Q9NS87 1388 aa16.77■□□□□ 0.28
SSBP4-215ENST00000625926 SETD1BQ9UPS6 1966 aaKnown RBP16.77■□□□□ 0.28
SSBP4-215ENST00000625926 KDM5DQ9BY66 1539 aa16.77■□□□□ 0.28
SSBP4-215ENST00000625926 CHIC2Q9UKJ5 165 aa16.77■□□□□ 0.28
SSBP4-215ENST00000625926 DAPK1P53355 1430 aa16.77■□□□□ 0.27
SSBP4-215ENST00000625926 TNRQ92752 1358 aa16.77■□□□□ 0.27
SSBP4-215ENST00000625926 SHANK2Q9UPX8 1470 aa16.76■□□□□ 0.27
SSBP4-215ENST00000625926 PKD2Q13563 968 aa16.76■□□□□ 0.27
SSBP4-215ENST00000625926 FAM50AQ14320 339 aaKnown RBP16.76■□□□□ 0.27
SSBP4-215ENST00000625926 NCKAP5LQ9HCH0 1330 aa16.75■□□□□ 0.27
SSBP4-215ENST00000625926 PZPP20742 1482 aa16.75■□□□□ 0.27
SSBP4-215ENST00000625926 PTPN23Q9H3S7 1636 aa16.75■□□□□ 0.27
SSBP4-215ENST00000625926 DUOX2Q9NRD8 1548 aa16.75■□□□□ 0.27
SSBP4-215ENST00000625926 ANKRD30AQ9BXX3 1397 aa16.74■□□□□ 0.27
SSBP4-215ENST00000625926 CAMSAP1Q5T5Y3 1602 aa16.73■□□□□ 0.27
SSBP4-215ENST00000625926 A2ML1A8K2U0 1454 aa16.73■□□□□ 0.27
SSBP4-215ENST00000625926 ERBINQ96RT1 1412 aa16.71■□□□□ 0.27
SSBP4-215ENST00000625926 THEMISQ8N1K5 641 aaPredicted RBP16.71■□□□□ 0.27
SSBP4-215ENST00000625926 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.71■□□□□ 0.27
SSBP4-215ENST00000625926 PLA2R1Q13018 1463 aa16.71■□□□□ 0.27
SSBP4-215ENST00000625926 CEP170BQ9Y4F5 1589 aaPredicted RBP16.7■□□□□ 0.26
SSBP4-215ENST00000625926 STRCQ7RTU9 1775 aa16.69■□□□□ 0.26
SSBP4-215ENST00000625926 ABCC3O15438 1527 aa16.69■□□□□ 0.26
SSBP4-215ENST00000625926 MYO3AQ8NEV4 1616 aa16.68■□□□□ 0.26
SSBP4-215ENST00000625926 DNMT1P26358 1616 aaKnown RBP16.67■□□□□ 0.26
SSBP4-215ENST00000625926 RNF17Q9BXT8 1623 aaKnown RBP16.67■□□□□ 0.26
SSBP4-215ENST00000625926 EIF2AK4Q9P2K8 1649 aaKnown RBP16.67■□□□□ 0.26
SSBP4-215ENST00000625926 KANK1Q14678 1352 aa16.67■□□□□ 0.26
SSBP4-215ENST00000625926 ANKLE2Q86XL3 938 aa16.67■□□□□ 0.26
SSBP4-215ENST00000625926 NLRP1Q9C000 1473 aa16.67■□□□□ 0.26
SSBP4-215ENST00000625926 PPARGC1BQ86YN6 1023 aaKnown RBP16.66■□□□□ 0.26
SSBP4-215ENST00000625926 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.64■□□□□ 0.262e-7■■■□□ 18.2
SSBP4-215ENST00000625926 ARHGAP31Q2M1Z3 1444 aa16.63■□□□□ 0.25
SSBP4-215ENST00000625926 ZNF142P52746 1687 aaPredicted RBP16.63■□□□□ 0.25
SSBP4-215ENST00000625926 ADGRL2O95490 1459 aa16.63■□□□□ 0.25
SSBP4-215ENST00000625926 ZNF335Q9H4Z2 1342 aaPredicted RBP16.63■□□□□ 0.25
SSBP4-215ENST00000625926 MROH1Q8NDA8 1641 aa16.63■□□□□ 0.25
SSBP4-215ENST00000625926 ERVK-7P63135 1459 aa16.62■□□□□ 0.25
SSBP4-215ENST00000625926 PRDM15P57071 1507 aaPredicted RBP16.6■□□□□ 0.25
SSBP4-215ENST00000625926 UGGT1Q9NYU2 1555 aa16.6■□□□□ 0.25
SSBP4-215ENST00000625926 CROCC2H7BZ55 1655 aa16.6■□□□□ 0.25
SSBP4-215ENST00000625926 ANKRD50Q9ULJ7 1429 aa16.6■□□□□ 0.25
SSBP4-215ENST00000625926 ZC3H13Q5T200 1668 aaKnown RBP16.59■□□□□ 0.25
SSBP4-215ENST00000625926 LTBP4Q8N2S1 1624 aa16.59■□□□□ 0.25
SSBP4-215ENST00000625926 ITGAEP38570 1179 aa16.58■□□□□ 0.24
SSBP4-215ENST00000625926 ROCK1Q13464 1354 aa16.56■□□□□ 0.24
SSBP4-215ENST00000625926 STAG3Q9UJ98 1225 aa16.56■□□□□ 0.24
SSBP4-215ENST00000625926 LMTK2Q8IWU2 1503 aa16.55■□□□□ 0.24
SSBP4-215ENST00000625926 NPHP4O75161 1426 aaPredicted RBP16.54■□□□□ 0.24
SSBP4-215ENST00000625926 IDI1Q13907 227 aa16.54■□□□□ 0.24
SSBP4-215ENST00000625926 IQSEC2Q5JU85 1478 aa16.54■□□□□ 0.24
SSBP4-215ENST00000625926 TXNDC2Q86VQ3 553 aa16.53■□□□□ 0.24
SSBP4-215ENST00000625926 MED14O60244 1454 aa16.53■□□□□ 0.24
SSBP4-215ENST00000625926 DEPDC5O75140 1603 aa16.52■□□□□ 0.24
SSBP4-215ENST00000625926 VWDEQ8N2E2 1590 aa16.52■□□□□ 0.24
SSBP4-215ENST00000625926 SLC52A1Q9NWF4 448 aa16.52■□□□□ 0.24
SSBP4-215ENST00000625926 EID1Q9Y6B2 187 aa16.52■□□□□ 0.24
SSBP4-215ENST00000625926 LTKP29376 864 aa16.51■□□□□ 0.23
SSBP4-215ENST00000625926 UBAP1LF5GYI3 381 aa16.5■□□□□ 0.23
SSBP4-215ENST00000625926 NEURL4Q96JN8 1562 aa16.5■□□□□ 0.23
SSBP4-215ENST00000625926 CEP152O94986 1710 aa16.5■□□□□ 0.23
SSBP4-215ENST00000625926 NOS1P29475 1434 aa16.49■□□□□ 0.23
SSBP4-215ENST00000625926 TMEM2Q9UHN6 1383 aa16.48■□□□□ 0.23
SSBP4-215ENST00000625926 SCAF11Q99590 1463 aaKnown RBP16.47■□□□□ 0.23
SSBP4-215ENST00000625926 NUP155O75694 1391 aa16.46■□□□□ 0.23
SSBP4-215ENST00000625926 RPRD2Q5VT52 1461 aaKnown RBP16.46■□□□□ 0.23
SSBP4-215ENST00000625926 ARHGAP23Q9P227 1491 aa16.46■□□□□ 0.23
SSBP4-215ENST00000625926 RRBP1Q9P2E9 1410 aaKnown RBP16.45■□□□□ 0.22
SSBP4-215ENST00000625926 EFCAB6Q5THR3 1501 aa16.45■□□□□ 0.22
SSBP4-215ENST00000625926 SLIT1O75093 1534 aa16.45■□□□□ 0.22
SSBP4-215ENST00000625926 CPS1P31327 1500 aa16.45■□□□□ 0.22
SSBP4-215ENST00000625926 TOM1O60784 492 aa16.43■□□□□ 0.22
SSBP4-215ENST00000625926 HDGFP51858 240 aaKnown RBP16.42■□□□□ 0.22
SSBP4-215ENST00000625926 MED1Q15648 1581 aaPredicted RBP16.41■□□□□ 0.22
SSBP4-215ENST00000625926 POLR1AO95602 1720 aaPredicted RBP16.4■□□□□ 0.22
SSBP4-215ENST00000625926 UBR1Q8IWV7 1749 aa16.4■□□□□ 0.22
SSBP4-215ENST00000625926 SYNMO15061 1565 aa16.39■□□□□ 0.21
SSBP4-215ENST00000625926 PIK3C2BO00750 1634 aa16.39■□□□□ 0.21
SSBP4-215ENST00000625926 CHGAP10645 457 aaKnown RBP16.39■□□□□ 0.21
SSBP4-215ENST00000625926 BCANQ96GW7 911 aa16.39■□□□□ 0.21
SSBP4-215ENST00000625926 UNC13BO14795 1591 aa16.38■□□□□ 0.21
SSBP4-215ENST00000625926 IQGAP1P46940 1657 aa16.37■□□□□ 0.21
SSBP4-215ENST00000625926 PIP4K2BP78356 416 aa16.37■□□□□ 0.21
SSBP4-215ENST00000625926 SLC26A8Q96RN1 970 aa16.37■□□□□ 0.21
SSBP4-215ENST00000625926 SCAF1Q9H7N4 1312 aaKnown RBP16.37■□□□□ 0.21
SSBP4-215ENST00000625926 PPP1R15AO75807 674 aaPredicted RBP16.36■□□□□ 0.21
SSBP4-215ENST00000625926 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.36■□□□□ 0.21
SSBP4-215ENST00000625926 TET3O43151 1660 aa16.36■□□□□ 0.21
SSBP4-215ENST00000625926 ADGRB3O60242 1522 aa16.35■□□□□ 0.21
SSBP4-215ENST00000625926 KCNA6P17658 529 aa16.35■□□□□ 0.21
SSBP4-215ENST00000625926 NAIPQ13075 1403 aa16.35■□□□□ 0.21
SSBP4-215ENST00000625926 LRRC7Q96NW7 1537 aa16.35■□□□□ 0.21
SSBP4-215ENST00000625926 RIMS2Q9UQ26 1411 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms