RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 FAM135AQ9P2D6 1515 aa15.23■□□□□ 0.03
VARS2-213ENST00000625423 RSPH4AQ5TD94 716 aa15.22■□□□□ 0.03
VARS2-213ENST00000625423 RGL3Q3MIN7 710 aa15.22■□□□□ 0.03
VARS2-213ENST00000625423 CDC42BPBQ9Y5S2 1711 aa15.21■□□□□ 0.02
VARS2-213ENST00000625423 MYBBP1AQ9BQG0 1328 aaKnown RBP15.21■□□□□ 0.02
VARS2-213ENST00000625423 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.21■□□□□ 0.021e-7■■□□□ 14
VARS2-213ENST00000625423 CCDC144AA2RUR9 1427 aa15.2■□□□□ 0.02
VARS2-213ENST00000625423 RNF123Q5XPI4 1314 aa15.2■□□□□ 0.02
VARS2-213ENST00000625423 PREX2Q70Z35 1606 aa15.2■□□□□ 0.02
VARS2-213ENST00000625423 RALBP1Q15311 655 aa15.19■□□□□ 0.02
VARS2-213ENST00000625423 PRAG1Q86YV5 1406 aa15.19■□□□□ 0.02
VARS2-213ENST00000625423 NBPF1Q3BBV0 1214 aa15.19■□□□□ 0.02
VARS2-213ENST00000625423 BRD4O60885 1362 aaPredicted RBP15.19■□□□□ 0.02
VARS2-213ENST00000625423 SYCP2Q9BX26 1530 aa15.18■□□□□ 0.02
VARS2-213ENST00000625423 LRPPRCP42704 1394 aaKnown RBP15.18■□□□□ 0.02
VARS2-213ENST00000625423 KTN1Q86UP2 1357 aaKnown RBP15.17■□□□□ 0.02
VARS2-213ENST00000625423 ARHGAP5Q13017 1502 aa15.16■□□□□ 0.02
VARS2-213ENST00000625423 PLA2R1Q13018 1463 aa15.16■□□□□ 0.02
VARS2-213ENST00000625423 ERICH6Q7L0X2 663 aa15.15■□□□□ 0.02
VARS2-213ENST00000625423 CCDC136Q96JN2 1154 aa15.15■□□□□ 0.02
VARS2-213ENST00000625423 TTC37Q6PGP7 1564 aa15.14■□□□□ 0.01
VARS2-213ENST00000625423 TRPM1Q7Z4N2 1603 aa15.14■□□□□ 0.01
VARS2-213ENST00000625423 E9PCH4 1651 aa15.14■□□□□ 0.01
VARS2-213ENST00000625423 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.14■□□□□ 0.01
VARS2-213ENST00000625423 A2MP01023 1474 aa15.13■□□□□ 0.01
VARS2-213ENST00000625423 PLEKHH2Q8IVE3 1493 aa15.13■□□□□ 0.01
VARS2-213ENST00000625423 NLRP13Q86W25 1043 aa15.12■□□□□ 0.01
VARS2-213ENST00000625423 SALL2Q9Y467 1007 aaPredicted RBP15.12■□□□□ 0.01
VARS2-213ENST00000625423 UNC13BO14795 1591 aa15.12■□□□□ 0.01
VARS2-213ENST00000625423 PER1O15534 1290 aaPredicted RBP15.11■□□□□ 0.01
VARS2-213ENST00000625423 MAST1Q9Y2H9 1570 aa15.11■□□□□ 0.01
VARS2-213ENST00000625423 GPRASP1Q5JY77 1395 aa15.11■□□□□ 0.01
VARS2-213ENST00000625423 PARD3Q8TEW0 1356 aa15.11■□□□□ 0.01
VARS2-213ENST00000625423 TESK2Q96S53 571 aa15.1■□□□□ 0.01
VARS2-213ENST00000625423 DISP3Q9P2K9 1392 aa15.09■□□□□ 0.01
VARS2-213ENST00000625423 CC2D1BQ5T0F9 858 aaKnown RBP15.08■□□□□ 0.01
VARS2-213ENST00000625423 CHD1O14646 1710 aa15.08■□□□□ 0
VARS2-213ENST00000625423 COL17A1Q9UMD9 1497 aaPredicted RBP15.07■□□□□ 0
VARS2-213ENST00000625423 ERCC6L2Q5T890 1561 aa15.07■□□□□ 0
VARS2-213ENST00000625423 IQGAP3Q86VI3 1631 aa15.07■□□□□ 0
VARS2-213ENST00000625423 PLXNC1O60486 1568 aa15.06■□□□□ 0
VARS2-213ENST00000625423 ABCC2Q92887 1545 aa15.06■□□□□ 0
VARS2-213ENST00000625423 RRP1P56182 461 aaKnown RBP15.06■□□□□ 0
VARS2-213ENST00000625423 PANK3Q9H999 370 aa15.06■□□□□ 0
VARS2-213ENST00000625423 PRDM15P57071 1507 aaPredicted RBP15.06■□□□□ 0
VARS2-213ENST00000625423 DUOX2Q9NRD8 1548 aa15.05■□□□□ 0
VARS2-213ENST00000625423 ERBINQ96RT1 1412 aa15.05■□□□□ 0
VARS2-213ENST00000625423 RCAN3Q9UKA8 241 aa15.05■□□□□ -0
VARS2-213ENST00000625423 SHROOM2Q13796 1616 aa15.05■□□□□ -0
VARS2-213ENST00000625423 MYO5CQ9NQX4 1742 aa15.04■□□□□ -0
VARS2-213ENST00000625423 TMF1P82094 1093 aa15.04■□□□□ -0
VARS2-213ENST00000625423 EXOC6Q8TAG9 804 aa15.03■□□□□ -0
VARS2-213ENST00000625423 WASHC2CQ9Y4E1 1318 aa15.03■□□□□ -0
VARS2-213ENST00000625423 ATP10AO60312 1499 aa15.03■□□□□ -0
VARS2-213ENST00000625423 LAMC1P11047 1609 aa15.03■□□□□ -0
VARS2-213ENST00000625423 PDE3BQ13370 1112 aa15.03■□□□□ -0
VARS2-213ENST00000625423 MYT1LQ9UL68 1186 aa15.03■□□□□ -0
VARS2-213ENST00000625423 PLCH2O75038 1416 aa15.02■□□□□ -0
VARS2-213ENST00000625423 EFCAB2Q5VUJ9 269 aa15.02■□□□□ -0
VARS2-213ENST00000625423 CDCA7LQ96GN5 454 aa15.02■□□□□ -0
VARS2-213ENST00000625423 MAGI2Q86UL8 1455 aa15.02□□□□□ -0.01
VARS2-213ENST00000625423 EIF2AK4Q9P2K8 1649 aaKnown RBP15.01□□□□□ -0.01
VARS2-213ENST00000625423 TRAPPC8Q9Y2L5 1435 aa15□□□□□ -0.01
VARS2-213ENST00000625423 NOP58Q9Y2X3 529 aaKnown RBP14.99□□□□□ -0.01
VARS2-213ENST00000625423 PAK3O75914 559 aaPredicted RBP14.97□□□□□ -0.01
VARS2-213ENST00000625423 BLMP54132 1417 aaPredicted RBP14.96□□□□□ -0.01
VARS2-213ENST00000625423 AFAP1Q8N556 730 aa14.96□□□□□ -0.01
VARS2-213ENST00000625423 ABCC1P33527 1531 aa14.96□□□□□ -0.01
VARS2-213ENST00000625423 SPAG9O60271 1321 aaKnown RBP14.96□□□□□ -0.02
VARS2-213ENST00000625423 ANP32AP39687 249 aaKnown RBP14.95□□□□□ -0.02
VARS2-213ENST00000625423 ZCCHC11Q5TAX3 1644 aaKnown RBP14.95□□□□□ -0.02
VARS2-213ENST00000625423 PLIN1O60240 522 aa14.94□□□□□ -0.02
VARS2-213ENST00000625423 RNF17Q9BXT8 1623 aaKnown RBP14.94□□□□□ -0.02
VARS2-213ENST00000625423 INSRP06213 1382 aa14.94□□□□□ -0.02
VARS2-213ENST00000625423 ADAMTS8Q9UP79 889 aa14.93□□□□□ -0.02
VARS2-213ENST00000625423 KNSTRNQ9Y448 316 aa14.93□□□□□ -0.02
VARS2-213ENST00000625423 DNAJC5Q9H3Z4 198 aa14.93□□□□□ -0.02
VARS2-213ENST00000625423 WDR7Q9Y4E6 1490 aa14.93□□□□□ -0.02
VARS2-213ENST00000625423 IPO9Q96P70 1041 aaKnown RBP14.93□□□□□ -0.02
VARS2-213ENST00000625423 BCL11AQ9H165 835 aa14.93□□□□□ -0.02
VARS2-213ENST00000625423 ZMYM4Q5VZL5 1548 aa14.91□□□□□ -0.02
VARS2-213ENST00000625423 MADDQ8WXG6 1647 aa14.91□□□□□ -0.02
VARS2-213ENST00000625423 UHRF1BP1LA0JNW5 1464 aa14.91□□□□□ -0.02
VARS2-213ENST00000625423 PPP2R1AP30153 589 aa14.91□□□□□ -0.02
VARS2-213ENST00000625423 OSCARQ8IYS5 282 aa14.9□□□□□ -0.02
VARS2-213ENST00000625423 TCERG1O14776 1098 aaKnown RBP14.9□□□□□ -0.02
VARS2-213ENST00000625423 AMER1Q5JTC6 1135 aaPredicted RBP14.9□□□□□ -0.02
VARS2-213ENST00000625423 RTEL1-TNFRSF6BF6WH68 1400 aa14.89□□□□□ -0.03
VARS2-213ENST00000625423 TRPM2O94759 1503 aa14.89□□□□□ -0.03
VARS2-213ENST00000625423 NPM1P06748 294 aaKnown RBP eCLIP14.88□□□□□ -0.03
VARS2-213ENST00000625423 NBR1Q14596 966 aa14.88□□□□□ -0.03
VARS2-213ENST00000625423 SCAF11Q99590 1463 aaKnown RBP14.88□□□□□ -0.03
VARS2-213ENST00000625423 PTPRTO14522 1441 aa14.88□□□□□ -0.03
VARS2-213ENST00000625423 CRBNQ96SW2 442 aa14.88□□□□□ -0.03
VARS2-213ENST00000625423 ZFYVE16Q7Z3T8 1539 aa14.88□□□□□ -0.03
VARS2-213ENST00000625423 WDR43Q15061 677 aaKnown RBP eCLIP14.88□□□□□ -0.03
VARS2-213ENST00000625423 CDCA8Q53HL2 280 aa14.88□□□□□ -0.03
VARS2-213ENST00000625423 ZBTB47Q9UFB7 747 aaPredicted RBP14.88□□□□□ -0.03
VARS2-213ENST00000625423 IQGAP1P46940 1657 aa14.87□□□□□ -0.03
VARS2-213ENST00000625423 CLTCL1P53675 1640 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms