RNA–Protein interactions for RNA: ENST00000625171.3

LINC00963-220, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 830 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-220ENST00000625171 MAGI2Q86UL8 1455 aa17.25■□□□□ 0.35
LINC00963-220ENST00000625171 TRIM52Q96A61 297 aa17.23■□□□□ 0.35
LINC00963-220ENST00000625171 RICTORQ6R327 1708 aa17.23■□□□□ 0.35
LINC00963-220ENST00000625171 RIMS1Q86UR5 1692 aaKnown RBP17.23■□□□□ 0.35
LINC00963-220ENST00000625171 KIDINS220Q9ULH0 1771 aa17.23■□□□□ 0.35
LINC00963-220ENST00000625171 ZMYM4Q5VZL5 1548 aa17.22■□□□□ 0.35
LINC00963-220ENST00000625171 PZPP20742 1482 aa17.21■□□□□ 0.35
LINC00963-220ENST00000625171 UNC13BO14795 1591 aa17.19■□□□□ 0.34
LINC00963-220ENST00000625171 NUP155O75694 1391 aa17.19■□□□□ 0.34
LINC00963-220ENST00000625171 EIF2AK4Q9P2K8 1649 aaKnown RBP17.19■□□□□ 0.34
LINC00963-220ENST00000625171 SLC4A1APQ9BWU0 796 aaKnown RBP17.18■□□□□ 0.34
LINC00963-220ENST00000625171 A2MP01023 1474 aa17.18■□□□□ 0.34
LINC00963-220ENST00000625171 ANKRD30BQ9BXX2 1392 aa17.16■□□□□ 0.34
LINC00963-220ENST00000625171 HSPA2P54652 639 aa17.15■□□□□ 0.34
LINC00963-220ENST00000625171 DEPDC5O75140 1603 aa17.14■□□□□ 0.33
LINC00963-220ENST00000625171 CERKQ8TCT0 537 aa17.13■□□□□ 0.33
LINC00963-220ENST00000625171 VWDEQ8N2E2 1590 aa17.13■□□□□ 0.33
LINC00963-220ENST00000625171 REREQ9P2R6 1566 aa17.13■□□□□ 0.33
LINC00963-220ENST00000625171 IQGAP3Q86VI3 1631 aa17.13■□□□□ 0.33
LINC00963-220ENST00000625171 YEATS2Q9ULM3 1422 aa17.13■□□□□ 0.33
LINC00963-220ENST00000625171 FAM135AQ9P2D6 1515 aa17.12■□□□□ 0.33
LINC00963-220ENST00000625171 MYT1LQ9UL68 1186 aa17.11■□□□□ 0.33
LINC00963-220ENST00000625171 DIP2CQ9Y2E4 1556 aa17.11■□□□□ 0.33
LINC00963-220ENST00000625171 PKD2Q13563 968 aa17.1■□□□□ 0.33
LINC00963-220ENST00000625171 ATP10AO60312 1499 aa17.1■□□□□ 0.33
LINC00963-220ENST00000625171 SIGLEC1Q9BZZ2 1709 aa17.1■□□□□ 0.33
LINC00963-220ENST00000625171 KIF3BO15066 747 aa17.09■□□□□ 0.33
LINC00963-220ENST00000625171 PPP6R1Q9UPN7 881 aa17.09■□□□□ 0.33
LINC00963-220ENST00000625171 KANK1Q14678 1352 aa17.09■□□□□ 0.33
LINC00963-220ENST00000625171 PRDM15P57071 1507 aaPredicted RBP17.09■□□□□ 0.33
LINC00963-220ENST00000625171 ABCA6Q8N139 1617 aa17.09■□□□□ 0.33
LINC00963-220ENST00000625171 FER1L4A9Z1Z3 1794 aa17.08■□□□□ 0.33
LINC00963-220ENST00000625171 RNF17Q9BXT8 1623 aaKnown RBP17.08■□□□□ 0.32
LINC00963-220ENST00000625171 AGLP35573 1532 aa17.08■□□□□ 0.32
LINC00963-220ENST00000625171 LMTK2Q8IWU2 1503 aa17.08■□□□□ 0.32
LINC00963-220ENST00000625171 SIN3AQ96ST3 1273 aa17.07■□□□□ 0.32
LINC00963-220ENST00000625171 RPRD2Q5VT52 1461 aaKnown RBP17.05■□□□□ 0.32
LINC00963-220ENST00000625171 MROH1Q8NDA8 1641 aa17.05■□□□□ 0.32
LINC00963-220ENST00000625171 PREX1Q8TCU6 1659 aa17.04■□□□□ 0.32
LINC00963-220ENST00000625171 PLPPR3Q6T4P5 718 aa17.04■□□□□ 0.32
LINC00963-220ENST00000625171 DMRT2Q9Y5R5 561 aa17.04■□□□□ 0.32
LINC00963-220ENST00000625171 MLECQ14165 292 aa17.03■□□□□ 0.32
LINC00963-220ENST00000625171 PPP1R15AO75807 674 aaPredicted RBP17.02■□□□□ 0.32
LINC00963-220ENST00000625171 PTPRTO14522 1441 aa17.02■□□□□ 0.31
LINC00963-220ENST00000625171 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.01■□□□□ 0.31
LINC00963-220ENST00000625171 FOXD1Q16676 465 aa17■□□□□ 0.31
LINC00963-220ENST00000625171 TET3O43151 1660 aa17■□□□□ 0.31
LINC00963-220ENST00000625171 ARHGAP31Q2M1Z3 1444 aa16.99■□□□□ 0.31
LINC00963-220ENST00000625171 NEUROD1Q13562 356 aa16.99■□□□□ 0.31
LINC00963-220ENST00000625171 TONSLQ96HA7 1378 aa16.99■□□□□ 0.31
LINC00963-220ENST00000625171 PLA2R1Q13018 1463 aa16.99■□□□□ 0.31
LINC00963-220ENST00000625171 UHRF1BP1Q6BDS2 1440 aa16.98■□□□□ 0.31
LINC00963-220ENST00000625171 DISP3Q9P2K9 1392 aa16.95■□□□□ 0.3
LINC00963-220ENST00000625171 SOCS7O14512 581 aa16.94■□□□□ 0.3
LINC00963-220ENST00000625171 GGT6Q6P531 493 aa16.94■□□□□ 0.3
LINC00963-220ENST00000625171 STAC3Q96MF2 364 aa16.94■□□□□ 0.3
LINC00963-220ENST00000625171 EFCAB6Q5THR3 1501 aa16.94■□□□□ 0.3
LINC00963-220ENST00000625171 STRCQ7RTU9 1775 aa16.94■□□□□ 0.3
LINC00963-220ENST00000625171 WASHC2CQ9Y4E1 1318 aa16.94■□□□□ 0.3
LINC00963-220ENST00000625171 ABCC3O15438 1527 aa16.93■□□□□ 0.3
LINC00963-220ENST00000625171 CEBPAP49715 358 aaPredicted RBP16.93■□□□□ 0.3
LINC00963-220ENST00000625171 E9PCH4 1651 aa16.93■□□□□ 0.3
LINC00963-220ENST00000625171 ZC3H13Q5T200 1668 aaKnown RBP16.93■□□□□ 0.3
LINC00963-220ENST00000625171 CCDC144AA2RUR9 1427 aa16.93■□□□□ 0.3
LINC00963-220ENST00000625171 NEURL4Q96JN8 1562 aa16.93■□□□□ 0.3
LINC00963-220ENST00000625171 SETD1BQ9UPS6 1966 aaKnown RBP16.92■□□□□ 0.3
LINC00963-220ENST00000625171 L3MBTL2Q969R5 705 aa16.91■□□□□ 0.3
LINC00963-220ENST00000625171 TRPM2O94759 1503 aa16.91■□□□□ 0.3
LINC00963-220ENST00000625171 IQSEC2Q5JU85 1478 aa16.9■□□□□ 0.3
LINC00963-220ENST00000625171 NPATQ14207 1427 aa16.88■□□□□ 0.29
LINC00963-220ENST00000625171 CNTLNQ9NXG0 1405 aa16.88■□□□□ 0.29
LINC00963-220ENST00000625171 ILDR2Q71H61 639 aa16.88■□□□□ 0.29
LINC00963-220ENST00000625171 NOS1P29475 1434 aa16.87■□□□□ 0.29
LINC00963-220ENST00000625171 SPHKAPQ2M3C7 1700 aa16.85■□□□□ 0.29
LINC00963-220ENST00000625171 SPATA31E1Q6ZUB1 1445 aa16.85■□□□□ 0.29
LINC00963-220ENST00000625171 SPATA31D1Q6ZQQ2 1576 aa16.85■□□□□ 0.29
LINC00963-220ENST00000625171 C3P01024 1663 aa16.85■□□□□ 0.29
LINC00963-220ENST00000625171 ESF1Q9H501 851 aaKnown RBP16.84■□□□□ 0.29
LINC00963-220ENST00000625171 CAMSAP1Q5T5Y3 1602 aa16.84■□□□□ 0.29
LINC00963-220ENST00000625171 CEP152O94986 1710 aa16.83■□□□□ 0.28
LINC00963-220ENST00000625171 LTBP4Q8N2S1 1624 aa16.83■□□□□ 0.28
LINC00963-220ENST00000625171 SLC52A1Q9NWF4 448 aa16.82■□□□□ 0.28
LINC00963-220ENST00000625171 ZNF316A6NFI3 1004 aaPredicted RBP16.8■□□□□ 0.28
LINC00963-220ENST00000625171 CLTCL1P53675 1640 aa16.78■□□□□ 0.28
LINC00963-220ENST00000625171 RPGRIP1LQ68CZ1 1315 aa16.77■□□□□ 0.28
LINC00963-220ENST00000625171 MROH2AA6NES4 1674 aa16.76■□□□□ 0.27
LINC00963-220ENST00000625171 NBPF8Q3BBV2 869 aa16.76■□□□□ 0.27
LINC00963-220ENST00000625171 PIK3C2BO00750 1634 aa16.76■□□□□ 0.27
LINC00963-220ENST00000625171 ZMYM3Q14202 1370 aa16.76■□□□□ 0.27
LINC00963-220ENST00000625171 DCAF11Q8TEB1 546 aa16.75■□□□□ 0.27
LINC00963-220ENST00000625171 ERVK-7P63135 1459 aa16.73■□□□□ 0.27
LINC00963-220ENST00000625171 SYNMO15061 1565 aa16.72■□□□□ 0.27
LINC00963-220ENST00000625171 PRAG1Q86YV5 1406 aa16.72■□□□□ 0.27
LINC00963-220ENST00000625171 ADGRB3O60242 1522 aa16.71■□□□□ 0.27
LINC00963-220ENST00000625171 IDI1Q13907 227 aa16.71■□□□□ 0.27
LINC00963-220ENST00000625171 CLTCQ00610 1675 aaKnown RBP16.71■□□□□ 0.27
LINC00963-220ENST00000625171 MYOM2P54296 1465 aa16.7■□□□□ 0.26
LINC00963-220ENST00000625171 RALGAPBQ86X10 1494 aa16.7■□□□□ 0.26
LINC00963-220ENST00000625171 RGL3Q3MIN7 710 aa16.7■□□□□ 0.26
LINC00963-220ENST00000625171 KIF1BO60333 1816 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms