RNA–Protein interactions for RNA: ENST00000625023.1

AC002540.1-201, humanhuman

BASIC

Gene AC002540.1, Length 1,349 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC002540.1-201ENST00000625023 CNTLNQ9NXG0 1405 aa13.29□□□□□ -0.28
AC002540.1-201ENST00000625023 PTPN23Q9H3S7 1636 aa13.29□□□□□ -0.28
AC002540.1-201ENST00000625023 FGD6Q6ZV73 1430 aa13.28□□□□□ -0.28
AC002540.1-201ENST00000625023 SLC24A1O60721 1099 aa13.28□□□□□ -0.28
AC002540.1-201ENST00000625023 CEBPAP49715 358 aaPredicted RBP13.28□□□□□ -0.28
AC002540.1-201ENST00000625023 APLP2Q06481 763 aa13.28□□□□□ -0.28
AC002540.1-201ENST00000625023 ABCC5O15440 1437 aa13.27□□□□□ -0.29
AC002540.1-201ENST00000625023 SHANK2Q9UPX8 1470 aa13.27□□□□□ -0.29
AC002540.1-201ENST00000625023 CROCC2H7BZ55 1655 aa13.27□□□□□ -0.29
AC002540.1-201ENST00000625023 PREX1Q8TCU6 1659 aa13.26□□□□□ -0.29
AC002540.1-201ENST00000625023 TSPY4P0CV99 314 aa13.25□□□□□ -0.29
AC002540.1-201ENST00000625023 TSPY10P0CW01 314 aa13.25□□□□□ -0.29
AC002540.1-201ENST00000625023 DNMT1P26358 1616 aaKnown RBP13.25□□□□□ -0.29
AC002540.1-201ENST00000625023 ZMYM3Q14202 1370 aa13.25□□□□□ -0.29
AC002540.1-201ENST00000625023 FAM135AQ9P2D6 1515 aa13.24□□□□□ -0.29
AC002540.1-201ENST00000625023 CLTCQ00610 1675 aaKnown RBP13.24□□□□□ -0.29
AC002540.1-201ENST00000625023 DAPK1P53355 1430 aa13.23□□□□□ -0.29
AC002540.1-201ENST00000625023 NPATQ14207 1427 aa13.23□□□□□ -0.29
AC002540.1-201ENST00000625023 RNF17Q9BXT8 1623 aaKnown RBP13.23□□□□□ -0.29
AC002540.1-201ENST00000625023 EIF2AK4Q9P2K8 1649 aaKnown RBP13.22□□□□□ -0.29
AC002540.1-201ENST00000625023 PTPRKQ15262 1439 aa13.22□□□□□ -0.29
AC002540.1-201ENST00000625023 MROH1Q8NDA8 1641 aa13.21□□□□□ -0.29
AC002540.1-201ENST00000625023 GGT6Q6P531 493 aa13.21□□□□□ -0.29
AC002540.1-201ENST00000625023 KIF3BO15066 747 aa13.2□□□□□ -0.3
AC002540.1-201ENST00000625023 DUOX2Q9NRD8 1548 aa13.2□□□□□ -0.3
AC002540.1-201ENST00000625023 KDM5DQ9BY66 1539 aa13.19□□□□□ -0.3
AC002540.1-201ENST00000625023 HSPA2P54652 639 aa13.19□□□□□ -0.3
AC002540.1-201ENST00000625023 UHRF1BP1Q6BDS2 1440 aa13.19□□□□□ -0.3
AC002540.1-201ENST00000625023 STRCQ7RTU9 1775 aa13.19□□□□□ -0.3
AC002540.1-201ENST00000625023 ADGRL2O95490 1459 aa13.18□□□□□ -0.3
AC002540.1-201ENST00000625023 NCOA1Q15788 1441 aa13.18□□□□□ -0.3
AC002540.1-201ENST00000625023 ESF1Q9H501 851 aaKnown RBP13.17□□□□□ -0.3
AC002540.1-201ENST00000625023 KIF15Q9NS87 1388 aa13.17□□□□□ -0.3
AC002540.1-201ENST00000625023 ERBINQ96RT1 1412 aa13.16□□□□□ -0.3
AC002540.1-201ENST00000625023 DEPDC5O75140 1603 aa13.16□□□□□ -0.3
AC002540.1-201ENST00000625023 PZPP20742 1482 aa13.16□□□□□ -0.3
AC002540.1-201ENST00000625023 ZNF142P52746 1687 aaPredicted RBP13.16□□□□□ -0.3
AC002540.1-201ENST00000625023 ABCC3O15438 1527 aa13.15□□□□□ -0.3
AC002540.1-201ENST00000625023 PRDM15P57071 1507 aaPredicted RBP13.15□□□□□ -0.3
AC002540.1-201ENST00000625023 ZC3H13Q5T200 1668 aaKnown RBP13.15□□□□□ -0.3
AC002540.1-201ENST00000625023 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.14□□□□□ -0.31
AC002540.1-201ENST00000625023 MYO3AQ8NEV4 1616 aa13.14□□□□□ -0.31
AC002540.1-201ENST00000625023 VWDEQ8N2E2 1590 aa13.13□□□□□ -0.31
AC002540.1-201ENST00000625023 ANKRD30AQ9BXX3 1397 aa13.13□□□□□ -0.31
AC002540.1-201ENST00000625023 WASHC2CQ9Y4E1 1318 aa13.12□□□□□ -0.31
AC002540.1-201ENST00000625023 RRP7BPQ9NSQ0 103 aa13.12□□□□□ -0.31
AC002540.1-201ENST00000625023 CEP170BQ9Y4F5 1589 aaPredicted RBP13.11□□□□□ -0.31
AC002540.1-201ENST00000625023 FBXO31Q5XUX0 539 aaPredicted RBP13.11□□□□□ -0.31
AC002540.1-201ENST00000625023 ARHGAP31Q2M1Z3 1444 aa13.1□□□□□ -0.31
AC002540.1-201ENST00000625023 SPATA31D1Q6ZQQ2 1576 aa13.1□□□□□ -0.31
AC002540.1-201ENST00000625023 RTN4Q9NQC3 1192 aaKnown RBP13.1□□□□□ -0.31
AC002540.1-201ENST00000625023 CEP152O94986 1710 aa13.09□□□□□ -0.31
AC002540.1-201ENST00000625023 A2ML1A8K2U0 1454 aa13.09□□□□□ -0.31
AC002540.1-201ENST00000625023 PLA2R1Q13018 1463 aa13.09□□□□□ -0.31
AC002540.1-201ENST00000625023 ROCK1Q13464 1354 aa13.09□□□□□ -0.31
AC002540.1-201ENST00000625023 LMTK2Q8IWU2 1503 aa13.09□□□□□ -0.31
AC002540.1-201ENST00000625023 RRBP1Q9P2E9 1410 aaKnown RBP13.09□□□□□ -0.31
AC002540.1-201ENST00000625023 CHIC2Q9UKJ5 165 aa13.09□□□□□ -0.31
AC002540.1-201ENST00000625023 CAMSAP1Q5T5Y3 1602 aa13.08□□□□□ -0.31
AC002540.1-201ENST00000625023 PTPRTO14522 1441 aa13.08□□□□□ -0.32
AC002540.1-201ENST00000625023 FAM50AQ14320 339 aaKnown RBP13.08□□□□□ -0.32
AC002540.1-201ENST00000625023 TNRQ92752 1358 aa13.07□□□□□ -0.32
AC002540.1-201ENST00000625023 ERVK-7P63135 1459 aa13.07□□□□□ -0.32
AC002540.1-201ENST00000625023 ANKRD50Q9ULJ7 1429 aa13.06□□□□□ -0.32
AC002540.1-201ENST00000625023 NLRP1Q9C000 1473 aa13.06□□□□□ -0.32
AC002540.1-201ENST00000625023 PPARGC1BQ86YN6 1023 aaKnown RBP13.05□□□□□ -0.32
AC002540.1-201ENST00000625023 CFAP65Q6ZU64 1925 aaKnown RBP13.03□□□□□ -0.32
AC002540.1-201ENST00000625023 UNC13BO14795 1591 aa13.02□□□□□ -0.32
AC002540.1-201ENST00000625023 EFCAB6Q5THR3 1501 aa13.02□□□□□ -0.33
AC002540.1-201ENST00000625023 PKD2Q13563 968 aa13.01□□□□□ -0.33
AC002540.1-201ENST00000625023 NOS1P29475 1434 aa13.01□□□□□ -0.33
AC002540.1-201ENST00000625023 NEURL4Q96JN8 1562 aa13.01□□□□□ -0.33
AC002540.1-201ENST00000625023 LTBP4Q8N2S1 1624 aa13.01□□□□□ -0.33
AC002540.1-201ENST00000625023 UGGT1Q9NYU2 1555 aa13□□□□□ -0.33
AC002540.1-201ENST00000625023 ILDR1Q86SU0 546 aaPredicted RBP13□□□□□ -0.33
AC002540.1-201ENST00000625023 NCKAP5LQ9HCH0 1330 aa12.99□□□□□ -0.33
AC002540.1-201ENST00000625023 UBR1Q8IWV7 1749 aa12.99□□□□□ -0.33
AC002540.1-201ENST00000625023 MED14O60244 1454 aa12.98□□□□□ -0.33
AC002540.1-201ENST00000625023 RPRD2Q5VT52 1461 aaKnown RBP12.98□□□□□ -0.33
AC002540.1-201ENST00000625023 KANK1Q14678 1352 aa12.98□□□□□ -0.33
AC002540.1-201ENST00000625023 POLR1AO95602 1720 aaPredicted RBP12.98□□□□□ -0.33
AC002540.1-201ENST00000625023 SYNMO15061 1565 aa12.98□□□□□ -0.33
AC002540.1-201ENST00000625023 TET3O43151 1660 aa12.97□□□□□ -0.33
AC002540.1-201ENST00000625023 KDM5AP29375 1690 aaKnown RBP12.97□□□□□ -0.33
AC002540.1-201ENST00000625023 AMER1Q5JTC6 1135 aaPredicted RBP12.97□□□□□ -0.33
AC002540.1-201ENST00000625023 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.97□□□□□ -0.33
AC002540.1-201ENST00000625023 IQGAP3Q86VI3 1631 aa12.97□□□□□ -0.33
AC002540.1-201ENST00000625023 ARHGAP23Q9P227 1491 aa12.97□□□□□ -0.33
AC002540.1-201ENST00000625023 THEMISQ8N1K5 641 aaPredicted RBP12.96□□□□□ -0.33
AC002540.1-201ENST00000625023 GCC2Q8IWJ2 1684 aa12.96□□□□□ -0.34
AC002540.1-201ENST00000625023 SLIT1O75093 1534 aa12.95□□□□□ -0.34
AC002540.1-201ENST00000625023 CERKQ8TCT0 537 aa12.95□□□□□ -0.34
AC002540.1-201ENST00000625023 NAIPQ13075 1403 aa12.95□□□□□ -0.34
AC002540.1-201ENST00000625023 FBXO41Q8TF61 875 aa12.94□□□□□ -0.34
AC002540.1-201ENST00000625023 PIK3C2BO00750 1634 aa12.94□□□□□ -0.34
AC002540.1-201ENST00000625023 E9PCH4 1651 aa12.94□□□□□ -0.34
AC002540.1-201ENST00000625023 IDI1Q13907 227 aa12.92□□□□□ -0.34
AC002540.1-201ENST00000625023 HFM1A2PYH4 1435 aa12.91□□□□□ -0.34
AC002540.1-201ENST00000625023 ITGAEP38570 1179 aa12.91□□□□□ -0.34
AC002540.1-201ENST00000625023 ANKLE2Q86XL3 938 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms