RNA–Protein interactions for RNA: ENST00000623185.3

LINC00963-216, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 786 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-216ENST00000623185 ESF1Q9H501 851 aaKnown RBP18.58■□□□□ 0.56
LINC00963-216ENST00000623185 WASHC2CQ9Y4E1 1318 aa18.57■□□□□ 0.56
LINC00963-216ENST00000623185 EIF2AK4Q9P2K8 1649 aaKnown RBP18.56■□□□□ 0.56
LINC00963-216ENST00000623185 BCORL1Q5H9F3 1711 aa18.55■□□□□ 0.56
LINC00963-216ENST00000623185 KANK1Q14678 1352 aa18.55■□□□□ 0.56
LINC00963-216ENST00000623185 SIGLEC1Q9BZZ2 1709 aa18.54■□□□□ 0.56
LINC00963-216ENST00000623185 KDM4FA0A1W2PPD8 638 aa18.54■□□□□ 0.56
LINC00963-216ENST00000623185 TRIM52Q96A61 297 aa18.54■□□□□ 0.56
LINC00963-216ENST00000623185 NUP155O75694 1391 aa18.54■□□□□ 0.56
LINC00963-216ENST00000623185 RAB3GAP2Q9H2M9 1393 aa18.54■□□□□ 0.56
LINC00963-216ENST00000623185 CNTLNQ9NXG0 1405 aa18.51■□□□□ 0.55
LINC00963-216ENST00000623185 GCC2Q8IWJ2 1684 aa18.5■□□□□ 0.55
LINC00963-216ENST00000623185 RNF17Q9BXT8 1623 aaKnown RBP18.49■□□□□ 0.55
LINC00963-216ENST00000623185 ZMYM3Q14202 1370 aa18.49■□□□□ 0.55
LINC00963-216ENST00000623185 KDM5DQ9BY66 1539 aa18.48■□□□□ 0.55
LINC00963-216ENST00000623185 FAM135AQ9P2D6 1515 aa18.48■□□□□ 0.55
LINC00963-216ENST00000623185 DEPDC5O75140 1603 aa18.46■□□□□ 0.55
LINC00963-216ENST00000623185 MPHOSPH9Q99550 1183 aa18.46■□□□□ 0.55
LINC00963-216ENST00000623185 ADAMTSL3P82987 1691 aa18.46■□□□□ 0.55
LINC00963-216ENST00000623185 PRDM15P57071 1507 aaPredicted RBP18.45■□□□□ 0.54
LINC00963-216ENST00000623185 SLC4A1APQ9BWU0 796 aaKnown RBP18.45■□□□□ 0.54
LINC00963-216ENST00000623185 VWDEQ8N2E2 1590 aa18.45■□□□□ 0.54
LINC00963-216ENST00000623185 MROH1Q8NDA8 1641 aa18.45■□□□□ 0.54
LINC00963-216ENST00000623185 LMTK2Q8IWU2 1503 aa18.44■□□□□ 0.54
LINC00963-216ENST00000623185 UNC13BO14795 1591 aa18.43■□□□□ 0.54
LINC00963-216ENST00000623185 ARHGAP31Q2M1Z3 1444 aa18.43■□□□□ 0.54
LINC00963-216ENST00000623185 CEBPAP49715 358 aaPredicted RBP18.42■□□□□ 0.54
LINC00963-216ENST00000623185 ABCC3O15438 1527 aa18.42■□□□□ 0.54
LINC00963-216ENST00000623185 PKD2Q13563 968 aa18.4■□□□□ 0.54
LINC00963-216ENST00000623185 PTPRMP28827 1452 aa18.39■□□□□ 0.53
LINC00963-216ENST00000623185 FBXO31Q5XUX0 539 aaPredicted RBP18.38■□□□□ 0.53
LINC00963-216ENST00000623185 PZPP20742 1482 aa18.38■□□□□ 0.53
LINC00963-216ENST00000623185 MADDQ8WXG6 1647 aa18.38■□□□□ 0.53
LINC00963-216ENST00000623185 IQGAP3Q86VI3 1631 aa18.37■□□□□ 0.53
LINC00963-216ENST00000623185 NPATQ14207 1427 aa18.36■□□□□ 0.53
LINC00963-216ENST00000623185 ZC3H13Q5T200 1668 aaKnown RBP18.36■□□□□ 0.53
LINC00963-216ENST00000623185 RPRD2Q5VT52 1461 aaKnown RBP18.36■□□□□ 0.53
LINC00963-216ENST00000623185 FER1L4A9Z1Z3 1794 aa18.34■□□□□ 0.53
LINC00963-216ENST00000623185 MROH2AA6NES4 1674 aa18.34■□□□□ 0.53
LINC00963-216ENST00000623185 CLTCQ00610 1675 aaKnown RBP18.34■□□□□ 0.53
LINC00963-216ENST00000623185 SLC52A1Q9NWF4 448 aa18.33■□□□□ 0.52
LINC00963-216ENST00000623185 PLPPR3Q6T4P5 718 aa18.32■□□□□ 0.52
LINC00963-216ENST00000623185 TET3O43151 1660 aa18.31■□□□□ 0.52
LINC00963-216ENST00000623185 RIMS1Q86UR5 1692 aaKnown RBP18.31■□□□□ 0.52
LINC00963-216ENST00000623185 EFCAB6Q5THR3 1501 aa18.3■□□□□ 0.52
LINC00963-216ENST00000623185 FOXD1Q16676 465 aa18.3■□□□□ 0.52
LINC00963-216ENST00000623185 PTPRTO14522 1441 aa18.3■□□□□ 0.52
LINC00963-216ENST00000623185 NOS1P29475 1434 aa18.3■□□□□ 0.52
LINC00963-216ENST00000623185 CAMSAP1Q5T5Y3 1602 aa18.29■□□□□ 0.52
LINC00963-216ENST00000623185 CEP152O94986 1710 aa18.29■□□□□ 0.52
LINC00963-216ENST00000623185 IDI1Q13907 227 aa18.28■□□□□ 0.52
LINC00963-216ENST00000623185 TNRQ92752 1358 aa18.28■□□□□ 0.52
LINC00963-216ENST00000623185 DHX57Q6P158 1386 aaKnown RBP18.27■□□□□ 0.51
LINC00963-216ENST00000623185 ERVK-7P63135 1459 aa18.26■□□□□ 0.51
LINC00963-216ENST00000623185 C3P01024 1663 aa18.26■□□□□ 0.51
LINC00963-216ENST00000623185 ANKRD30BQ9BXX2 1392 aa18.25■□□□□ 0.51
LINC00963-216ENST00000623185 SPATA31D1Q6ZQQ2 1576 aa18.25■□□□□ 0.51
LINC00963-216ENST00000623185 SETD1BQ9UPS6 1966 aaKnown RBP18.24■□□□□ 0.51
LINC00963-216ENST00000623185 PLA2R1Q13018 1463 aa18.24■□□□□ 0.51
LINC00963-216ENST00000623185 E9PCH4 1651 aa18.24■□□□□ 0.51
LINC00963-216ENST00000623185 NLRP1Q9C000 1473 aa18.21■□□□□ 0.51
LINC00963-216ENST00000623185 THEMISQ8N1K5 641 aaPredicted RBP18.2■□□□□ 0.5
LINC00963-216ENST00000623185 CLSPNQ9HAW4 1339 aa18.19■□□□□ 0.5
LINC00963-216ENST00000623185 PREX1Q8TCU6 1659 aa18.18■□□□□ 0.5
LINC00963-216ENST00000623185 STAG3Q9UJ98 1225 aa18.18■□□□□ 0.5
LINC00963-216ENST00000623185 CFAP65Q6ZU64 1925 aaKnown RBP18.17■□□□□ 0.5
LINC00963-216ENST00000623185 UHRF1BP1Q6BDS2 1440 aa18.17■□□□□ 0.5
LINC00963-216ENST00000623185 CCDC144AA2RUR9 1427 aa18.16■□□□□ 0.5
LINC00963-216ENST00000623185 TRPM2O94759 1503 aa18.15■□□□□ 0.5
LINC00963-216ENST00000623185 CCER1Q8TC90 406 aaPredicted RBP18.15■□□□□ 0.5
LINC00963-216ENST00000623185 SYNMO15061 1565 aa18.15■□□□□ 0.5
LINC00963-216ENST00000623185 A2ML1A8K2U0 1454 aa18.14■□□□□ 0.5
LINC00963-216ENST00000623185 CHGAP10645 457 aaKnown RBP18.14■□□□□ 0.49
LINC00963-216ENST00000623185 HDGFP51858 240 aaKnown RBP18.14■□□□□ 0.49
LINC00963-216ENST00000623185 SIN3AQ96ST3 1273 aa18.12■□□□□ 0.49
LINC00963-216ENST00000623185 SPHKAPQ2M3C7 1700 aa18.12■□□□□ 0.49
LINC00963-216ENST00000623185 RPGRIP1LQ68CZ1 1315 aa18.11■□□□□ 0.49
LINC00963-216ENST00000623185 PIK3C2BO00750 1634 aa18.1■□□□□ 0.49
LINC00963-216ENST00000623185 UGGT1Q9NYU2 1555 aa18.09■□□□□ 0.49
LINC00963-216ENST00000623185 STAC3Q96MF2 364 aa18.09■□□□□ 0.49
LINC00963-216ENST00000623185 NEUROD1Q13562 356 aa18.08■□□□□ 0.48
LINC00963-216ENST00000623185 RGL3Q3MIN7 710 aa18.08■□□□□ 0.48
LINC00963-216ENST00000623185 ZNF326Q5BKZ1 582 aaKnown RBP18.08■□□□□ 0.48
LINC00963-216ENST00000623185 ANKLE2Q86XL3 938 aa18.08■□□□□ 0.48
LINC00963-216ENST00000623185 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.08■□□□□ 0.48
LINC00963-216ENST00000623185 TMEM2Q9UHN6 1383 aa18.07■□□□□ 0.48
LINC00963-216ENST00000623185 EID1Q9Y6B2 187 aa18.07■□□□□ 0.48
LINC00963-216ENST00000623185 CEP170BQ9Y4F5 1589 aaPredicted RBP18.07■□□□□ 0.48
LINC00963-216ENST00000623185 LMTK3Q96Q04 1460 aa18.07■□□□□ 0.48
LINC00963-216ENST00000623185 SPATA31E1Q6ZUB1 1445 aa18.06■□□□□ 0.48
LINC00963-216ENST00000623185 HSPA2P54652 639 aa18.06■□□□□ 0.48
LINC00963-216ENST00000623185 TXNDC2Q86VQ3 553 aa18.06■□□□□ 0.48
LINC00963-216ENST00000623185 TIMELESSQ9UNS1 1208 aa18.06■□□□□ 0.48
LINC00963-216ENST00000623185 CLTCL1P53675 1640 aa18.05■□□□□ 0.48
LINC00963-216ENST00000623185 MYO3AQ8NEV4 1616 aa18.05■□□□□ 0.48
LINC00963-216ENST00000623185 VGFO15240 615 aaPredicted RBP18.05■□□□□ 0.48
LINC00963-216ENST00000623185 KDM5AP29375 1690 aaKnown RBP18.05■□□□□ 0.48
LINC00963-216ENST00000623185 NEURL4Q96JN8 1562 aa18.04■□□□□ 0.48
LINC00963-216ENST00000623185 TMEM131LA2VDJ0 1609 aa18.04■□□□□ 0.48
LINC00963-216ENST00000623185 LTKP29376 864 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms