RNA–Protein interactions for RNA: ENST00000622972.3

LINC00963-215, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 444 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-215ENST00000622972 ARHGEF12Q9NZN5 1544 aa9.28□□□□□ -0.92
LINC00963-215ENST00000622972 HNRNPMP52272 730 aaKnown RBP eCLIP9.28□□□□□ -0.92
LINC00963-215ENST00000622972 DIP2CQ9Y2E4 1556 aa9.28□□□□□ -0.92
LINC00963-215ENST00000622972 GPATCH8Q9UKJ3 1502 aaKnown RBP9.27□□□□□ -0.93
LINC00963-215ENST00000622972 SPAG9O60271 1321 aaKnown RBP9.27□□□□□ -0.93
LINC00963-215ENST00000622972 MLH3Q9UHC1 1453 aa9.27□□□□□ -0.93
LINC00963-215ENST00000622972 ABCA6Q8N139 1617 aa9.27□□□□□ -0.93
LINC00963-215ENST00000622972 FBXO41Q8TF61 875 aa9.26□□□□□ -0.93
LINC00963-215ENST00000622972 SYCP2Q9BX26 1530 aa9.26□□□□□ -0.93
LINC00963-215ENST00000622972 REM2Q8IYK8 340 aaPredicted RBP9.25□□□□□ -0.93
LINC00963-215ENST00000622972 SPDYE1Q8NFV5 336 aaPredicted RBP9.25□□□□□ -0.93
LINC00963-215ENST00000622972 KIDINS220Q9ULH0 1771 aa9.24□□□□□ -0.93
LINC00963-215ENST00000622972 UHRF1BP1Q6BDS2 1440 aa9.24□□□□□ -0.93
LINC00963-215ENST00000622972 PREX1Q8TCU6 1659 aa9.24□□□□□ -0.93
LINC00963-215ENST00000622972 PLEKHH2Q8IVE3 1493 aa9.24□□□□□ -0.93
LINC00963-215ENST00000622972 REREQ9P2R6 1566 aa9.24□□□□□ -0.93
LINC00963-215ENST00000622972 AGLP35573 1532 aa9.22□□□□□ -0.93
LINC00963-215ENST00000622972 GGT6Q6P531 493 aa9.22□□□□□ -0.93
LINC00963-215ENST00000622972 CLEC11AQ9Y240 323 aa9.22□□□□□ -0.93
LINC00963-215ENST00000622972 CROCC2H7BZ55 1655 aa9.22□□□□□ -0.93
LINC00963-215ENST00000622972 SETD1BQ9UPS6 1966 aaKnown RBP9.21□□□□□ -0.93
LINC00963-215ENST00000622972 C3P01024 1663 aa9.21□□□□□ -0.93
LINC00963-215ENST00000622972 CNTLNQ9NXG0 1405 aa9.21□□□□□ -0.94
LINC00963-215ENST00000622972 KIAA1107Q9UPP5 1409 aa9.21□□□□□ -0.94
LINC00963-215ENST00000622972 ATP7AQ04656 1500 aa9.21□□□□□ -0.94
LINC00963-215ENST00000622972 PPARGC1BQ86YN6 1023 aaKnown RBP9.2□□□□□ -0.94
LINC00963-215ENST00000622972 ZNF644Q9H582 1327 aaPredicted RBP9.2□□□□□ -0.94
LINC00963-215ENST00000622972 CAMSAP2Q08AD1 1489 aa9.2□□□□□ -0.94
LINC00963-215ENST00000622972 PTPN23Q9H3S7 1636 aa9.2□□□□□ -0.94
LINC00963-215ENST00000622972 CERKQ8TCT0 537 aa9.19□□□□□ -0.94
LINC00963-215ENST00000622972 A2MP01023 1474 aa9.19□□□□□ -0.94
LINC00963-215ENST00000622972 INO80Q9ULG1 1556 aaPredicted RBP9.19□□□□□ -0.94
LINC00963-215ENST00000622972 MYOM3Q5VTT5 1437 aa9.18□□□□□ -0.94
LINC00963-215ENST00000622972 ADGBQ8N7X0 1667 aa9.18□□□□□ -0.94
LINC00963-215ENST00000622972 MBD5Q9P267 1494 aa9.18□□□□□ -0.94
LINC00963-215ENST00000622972 TCOF1Q13428 1488 aaKnown RBP9.17□□□□□ -0.94
LINC00963-215ENST00000622972 ZMYM3Q14202 1370 aa9.17□□□□□ -0.94
LINC00963-215ENST00000622972 CLTCQ00610 1675 aaKnown RBP9.16□□□□□ -0.94
LINC00963-215ENST00000622972 ARHGEF5Q12774 1597 aa9.16□□□□□ -0.94
LINC00963-215ENST00000622972 TSPY4P0CV99 314 aa9.16□□□□□ -0.94
LINC00963-215ENST00000622972 TSPY10P0CW01 314 aa9.16□□□□□ -0.94
LINC00963-215ENST00000622972 VASPP50552 380 aaPredicted RBP9.16□□□□□ -0.94
LINC00963-215ENST00000622972 MROH2AA6NES4 1674 aa9.16□□□□□ -0.94
LINC00963-215ENST00000622972 DNMT1P26358 1616 aaKnown RBP9.16□□□□□ -0.94
LINC00963-215ENST00000622972 FGD6Q6ZV73 1430 aa9.15□□□□□ -0.94
LINC00963-215ENST00000622972 KIF3BO15066 747 aa9.15□□□□□ -0.94
LINC00963-215ENST00000622972 PRR29P0C7W0 189 aa9.15□□□□□ -0.94
LINC00963-215ENST00000622972 RSPH4AQ5TD94 716 aa9.15□□□□□ -0.94
LINC00963-215ENST00000622972 STRCQ7RTU9 1775 aa9.14□□□□□ -0.95
LINC00963-215ENST00000622972 PITPNM1O00562 1244 aa9.14□□□□□ -0.95
LINC00963-215ENST00000622972 CCDC141Q6ZP82 1450 aa9.14□□□□□ -0.95
LINC00963-215ENST00000622972 RTEL1-TNFRSF6BF6WH68 1400 aa9.14□□□□□ -0.95
LINC00963-215ENST00000622972 NPATQ14207 1427 aa9.14□□□□□ -0.95
LINC00963-215ENST00000622972 PLXNC1O60486 1568 aa9.13□□□□□ -0.95
LINC00963-215ENST00000622972 MIER1Q8N108 512 aa9.13□□□□□ -0.95
LINC00963-215ENST00000622972 PLCD3Q8N3E9 789 aa9.13□□□□□ -0.95
LINC00963-215ENST00000622972 DHX29Q7Z478 1369 aaKnown RBP9.12□□□□□ -0.95
LINC00963-215ENST00000622972 MAST1Q9Y2H9 1570 aa9.12□□□□□ -0.95
LINC00963-215ENST00000622972 PLEKHG5O94827 1062 aa9.12□□□□□ -0.95
LINC00963-215ENST00000622972 PTPRTO14522 1441 aa9.12□□□□□ -0.95
LINC00963-215ENST00000622972 PTPRKQ15262 1439 aa9.12□□□□□ -0.95
LINC00963-215ENST00000622972 MIA2Q96PC5 1412 aa9.12□□□□□ -0.95
LINC00963-215ENST00000622972 CAMSAP1Q5T5Y3 1602 aa9.12□□□□□ -0.95
LINC00963-215ENST00000622972 NCKAP5LQ9HCH0 1330 aa9.11□□□□□ -0.95
LINC00963-215ENST00000622972 WASHC2CQ9Y4E1 1318 aa9.11□□□□□ -0.95
LINC00963-215ENST00000622972 ABCC5O15440 1437 aa9.1□□□□□ -0.95
LINC00963-215ENST00000622972 NCOA1Q15788 1441 aa9.1□□□□□ -0.95
LINC00963-215ENST00000622972 RRBP1Q9P2E9 1410 aaKnown RBP9.1□□□□□ -0.95
LINC00963-215ENST00000622972 MYO3AQ8NEV4 1616 aa9.09□□□□□ -0.95
LINC00963-215ENST00000622972 CEP170BQ9Y4F5 1589 aaPredicted RBP9.08□□□□□ -0.96
LINC00963-215ENST00000622972 PKD2Q13563 968 aa9.08□□□□□ -0.96
LINC00963-215ENST00000622972 DAPK1P53355 1430 aa9.07□□□□□ -0.96
LINC00963-215ENST00000622972 KDM5DQ9BY66 1539 aa9.07□□□□□ -0.96
LINC00963-215ENST00000622972 MROH1Q8NDA8 1641 aa9.07□□□□□ -0.96
LINC00963-215ENST00000622972 FBXO31Q5XUX0 539 aaPredicted RBP9.07□□□□□ -0.96
LINC00963-215ENST00000622972 KLHL34Q8N239 644 aa9.07□□□□□ -0.96
LINC00963-215ENST00000622972 TNRQ92752 1358 aa9.07□□□□□ -0.96
LINC00963-215ENST00000622972 SHANK2Q9UPX8 1470 aa9.07□□□□□ -0.96
LINC00963-215ENST00000622972 ZNF142P52746 1687 aaPredicted RBP9.07□□□□□ -0.96
LINC00963-215ENST00000622972 ZNF335Q9H4Z2 1342 aaPredicted RBP9.05□□□□□ -0.96
LINC00963-215ENST00000622972 GCC2Q8IWJ2 1684 aa9.05□□□□□ -0.96
LINC00963-215ENST00000622972 A2ML1A8K2U0 1454 aa9.05□□□□□ -0.96
LINC00963-215ENST00000622972 PLA2R1Q13018 1463 aa9.05□□□□□ -0.96
LINC00963-215ENST00000622972 ADGRL2O95490 1459 aa9.04□□□□□ -0.96
LINC00963-215ENST00000622972 PZPP20742 1482 aa9.04□□□□□ -0.96
LINC00963-215ENST00000622972 THEMISQ8N1K5 641 aaPredicted RBP9.04□□□□□ -0.96
LINC00963-215ENST00000622972 DEPDC5O75140 1603 aa9.03□□□□□ -0.96
LINC00963-215ENST00000622972 RNF17Q9BXT8 1623 aaKnown RBP9.03□□□□□ -0.96
LINC00963-215ENST00000622972 UBAP1LF5GYI3 381 aa9.03□□□□□ -0.96
LINC00963-215ENST00000622972 ANKLE2Q86XL3 938 aa9.03□□□□□ -0.96
LINC00963-215ENST00000622972 IFNLR1Q8IU57 520 aaPredicted RBP9.03□□□□□ -0.96
LINC00963-215ENST00000622972 RRP7BPQ9NSQ0 103 aa9.03□□□□□ -0.96
LINC00963-215ENST00000622972 ZBTB47Q9UFB7 747 aaPredicted RBP9.03□□□□□ -0.96
LINC00963-215ENST00000622972 FAM135AQ9P2D6 1515 aa9.03□□□□□ -0.96
LINC00963-215ENST00000622972 LTBP4Q8N2S1 1624 aa9.02□□□□□ -0.96
LINC00963-215ENST00000622972 CFAP65Q6ZU64 1925 aaKnown RBP9.02□□□□□ -0.97
LINC00963-215ENST00000622972 CHRDL2Q6WN34 429 aa9.02□□□□□ -0.97
LINC00963-215ENST00000622972 CHIC2Q9UKJ5 165 aa9.02□□□□□ -0.97
LINC00963-215ENST00000622972 CEP152O94986 1710 aa9.02□□□□□ -0.97
LINC00963-215ENST00000622972 EIF2AK4Q9P2K8 1649 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms