RNA–Protein interactions for RNA: ENST00000622892.4

PSME3-217, Transcript of proteasome activator subunit 3, humanhuman

TSL 1 (best) BASIC

Gene PSME3, Length 3,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME3-217ENST00000622892 WDR7Q9Y4E6 1490 aa17.5■□□□□ 0.39
PSME3-217ENST00000622892 PKD2Q13563 968 aa17.49■□□□□ 0.39
PSME3-217ENST00000622892 ANKRD50Q9ULJ7 1429 aa17.48■□□□□ 0.39
PSME3-217ENST00000622892 NUP155O75694 1391 aa17.48■□□□□ 0.39
PSME3-217ENST00000622892 DHX29Q7Z478 1369 aaKnown RBP17.48■□□□□ 0.39
PSME3-217ENST00000622892 UHRF1BP1LA0JNW5 1464 aa17.47■□□□□ 0.39
PSME3-217ENST00000622892 TEX14Q8IWB6 1497 aa17.47■□□□□ 0.39
PSME3-217ENST00000622892 GCC2Q8IWJ2 1684 aa17.47■□□□□ 0.39
PSME3-217ENST00000622892 PREX2Q70Z35 1606 aa17.47■□□□□ 0.39
PSME3-217ENST00000622892 RTL5Q5HYW3 569 aaPredicted RBP17.46■□□□□ 0.39
PSME3-217ENST00000622892 PNISRQ8TF01 805 aaKnown RBP17.46■□□□□ 0.39
PSME3-217ENST00000622892 ARHGEF12Q9NZN5 1544 aa17.46■□□□□ 0.38
PSME3-217ENST00000622892 TRAPPC8Q9Y2L5 1435 aa17.46■□□□□ 0.38
PSME3-217ENST00000622892 MBD5Q9P267 1494 aa17.45■□□□□ 0.38
PSME3-217ENST00000622892 MYO5CQ9NQX4 1742 aa17.45■□□□□ 0.38
PSME3-217ENST00000622892 USP47Q96K76 1375 aa17.45■□□□□ 0.38
PSME3-217ENST00000622892 CCDC141Q6ZP82 1450 aa17.44■□□□□ 0.38
PSME3-217ENST00000622892 ROCK1Q13464 1354 aa17.44■□□□□ 0.38
PSME3-217ENST00000622892 PLCH2O75038 1416 aa17.44■□□□□ 0.38
PSME3-217ENST00000622892 RNF123Q5XPI4 1314 aa17.44■□□□□ 0.38
PSME3-217ENST00000622892 SPAG9O60271 1321 aaKnown RBP17.42■□□□□ 0.38
PSME3-217ENST00000622892 KDM2AQ9Y2K7 1162 aa17.42■□□□□ 0.38
PSME3-217ENST00000622892 EXOC6Q8TAG9 804 aa17.42■□□□□ 0.38
PSME3-217ENST00000622892 FANCAO15360 1455 aa17.41■□□□□ 0.38
PSME3-217ENST00000622892 RAPGEF3O95398 923 aa17.41■□□□□ 0.38
PSME3-217ENST00000622892 FAM69CQ0P6D2 419 aa17.39■□□□□ 0.37
PSME3-217ENST00000622892 LAS1LQ9Y4W2 734 aaKnown RBP17.39■□□□□ 0.37
PSME3-217ENST00000622892 SCAPERQ9BY12 1400 aa17.39■□□□□ 0.37
PSME3-217ENST00000622892 CARD11Q9BXL7 1154 aa17.38■□□□□ 0.37
PSME3-217ENST00000622892 CROCC2H7BZ55 1655 aa17.38■□□□□ 0.37
PSME3-217ENST00000622892 RGL3Q3MIN7 710 aa17.38■□□□□ 0.37
PSME3-217ENST00000622892 RIMBP3CA6NJZ7 1639 aa17.37■□□□□ 0.37
PSME3-217ENST00000622892 RIMBP3BA6NNM3 1639 aa17.37■□□□□ 0.37
PSME3-217ENST00000622892 RIMBP3Q9UFD9 1639 aa17.37■□□□□ 0.37
PSME3-217ENST00000622892 CD109Q6YHK3 1445 aa17.37■□□□□ 0.37
PSME3-217ENST00000622892 PLEKHH2Q8IVE3 1493 aa17.36■□□□□ 0.37
PSME3-217ENST00000622892 ADGBQ8N7X0 1667 aa17.36■□□□□ 0.37
PSME3-217ENST00000622892 ST20-MTHFSA0A0A6YYL1 179 aa17.36■□□□□ 0.37
PSME3-217ENST00000622892 ADGRL1O94910 1474 aa17.35■□□□□ 0.37
PSME3-217ENST00000622892 SKAP1Q86WV1 359 aa17.35■□□□□ 0.37
PSME3-217ENST00000622892 BCORL1Q5H9F3 1711 aa17.35■□□□□ 0.37
PSME3-217ENST00000622892 KIF3BO15066 747 aa17.34■□□□□ 0.37
PSME3-217ENST00000622892 RRP1P56182 461 aaKnown RBP17.34■□□□□ 0.37
PSME3-217ENST00000622892 RTN4Q9NQC3 1192 aaKnown RBP17.34■□□□□ 0.37
PSME3-217ENST00000622892 SENP3Q9H4L4 574 aaPredicted RBP17.33■□□□□ 0.37
PSME3-217ENST00000622892 PZPP20742 1482 aa17.33■□□□□ 0.37
PSME3-217ENST00000622892 RSPH4AQ5TD94 716 aa17.33■□□□□ 0.36
PSME3-217ENST00000622892 RCAN3Q9UKA8 241 aa17.33■□□□□ 0.36
PSME3-217ENST00000622892 ADGRL2O95490 1459 aa17.32■□□□□ 0.36
PSME3-217ENST00000622892 PDE4AP27815 886 aa17.32■□□□□ 0.36
PSME3-217ENST00000622892 IL27Q8NEV9 243 aa17.32■□□□□ 0.36
PSME3-217ENST00000622892 PLIN1O60240 522 aa17.31■□□□□ 0.36
PSME3-217ENST00000622892 CDCA7LQ96GN5 454 aa17.31■□□□□ 0.36
PSME3-217ENST00000622892 GGT6Q6P531 493 aa17.3■□□□□ 0.36
PSME3-217ENST00000622892 NEFMP07197 916 aa17.3■□□□□ 0.36
PSME3-217ENST00000622892 ABCC1P33527 1531 aa17.29■□□□□ 0.36
PSME3-217ENST00000622892 DCAF11Q8TEB1 546 aa17.29■□□□□ 0.36
PSME3-217ENST00000622892 ARHGEF5Q12774 1597 aa17.29■□□□□ 0.36
PSME3-217ENST00000622892 ANO8Q9HCE9 1232 aaPredicted RBP17.29■□□□□ 0.36
PSME3-217ENST00000622892 SHANK2Q9UPX8 1470 aa17.29■□□□□ 0.36
PSME3-217ENST00000622892 KIAA1107Q9UPP5 1409 aa17.28■□□□□ 0.36
PSME3-217ENST00000622892 MYBBP1AQ9BQG0 1328 aaKnown RBP17.27■□□□□ 0.36
PSME3-217ENST00000622892 TCERG1O14776 1098 aaKnown RBP17.26■□□□□ 0.35
PSME3-217ENST00000622892 TSPOAP1O95153 1857 aa17.26■□□□□ 0.35
PSME3-217ENST00000622892 POLR1AO95602 1720 aaPredicted RBP17.25■□□□□ 0.35
PSME3-217ENST00000622892 BACH2Q9BYV9 841 aa17.25■□□□□ 0.35
PSME3-217ENST00000622892 ABCA9Q8IUA7 1624 aa17.25■□□□□ 0.35
PSME3-217ENST00000622892 ARID4BQ4LE39 1312 aaPredicted RBP17.24■□□□□ 0.35
PSME3-217ENST00000622892 LRPPRCP42704 1394 aaKnown RBP17.24■□□□□ 0.35
PSME3-217ENST00000622892 RALBP1Q15311 655 aa17.23■□□□□ 0.35
PSME3-217ENST00000622892 ROCK2O75116 1388 aaKnown RBP17.23■□□□□ 0.35
PSME3-217ENST00000622892 BRD4O60885 1362 aaPredicted RBP17.22■□□□□ 0.35
PSME3-217ENST00000622892 CC2D1BQ5T0F9 858 aaKnown RBP17.22■□□□□ 0.35
PSME3-217ENST00000622892 KDM5CP41229 1560 aa17.2■□□□□ 0.34
PSME3-217ENST00000622892 MLECQ14165 292 aa17.2■□□□□ 0.34
PSME3-217ENST00000622892 FAM135AQ9P2D6 1515 aa17.2■□□□□ 0.34
PSME3-217ENST00000622892 SLC4A3P48751 1232 aa17.2■□□□□ 0.34
PSME3-217ENST00000622892 CHGAP10645 457 aaKnown RBP17.2■□□□□ 0.34
PSME3-217ENST00000622892 NLRP13Q86W25 1043 aa17.19■□□□□ 0.34
PSME3-217ENST00000622892 TRHP20396 242 aaPredicted RBP17.19■□□□□ 0.34
PSME3-217ENST00000622892 CRBNQ96SW2 442 aa17.18■□□□□ 0.34
PSME3-217ENST00000622892 ATP7AQ04656 1500 aa17.17■□□□□ 0.34
PSME3-217ENST00000622892 ZFYVE16Q7Z3T8 1539 aa17.17■□□□□ 0.34
PSME3-217ENST00000622892 PLPPR3Q6T4P5 718 aa17.17■□□□□ 0.34
PSME3-217ENST00000622892 NBPF1Q3BBV0 1214 aa17.16■□□□□ 0.34
PSME3-217ENST00000622892 DUOX2Q9NRD8 1548 aa17.16■□□□□ 0.34
PSME3-217ENST00000622892 C20orf194Q5TEA3 1177 aa17.15■□□□□ 0.34
PSME3-217ENST00000622892 KTN1Q86UP2 1357 aaKnown RBP17.14■□□□□ 0.33
PSME3-217ENST00000622892 MS4A1P11836 297 aa17.14■□□□□ 0.33
PSME3-217ENST00000622892 CCDC144AA2RUR9 1427 aa17.14■□□□□ 0.33
PSME3-217ENST00000622892 RALGAPBQ86X10 1494 aa17.14■□□□□ 0.33
PSME3-217ENST00000622892 CFAP65Q6ZU64 1925 aaKnown RBP17.14■□□□□ 0.33
PSME3-217ENST00000622892 PDE3BQ13370 1112 aa17.13■□□□□ 0.33
PSME3-217ENST00000622892 ZNF518AQ6AHZ1 1483 aa17.12■□□□□ 0.33
PSME3-217ENST00000622892 UHRF1BP1Q6BDS2 1440 aa17.12■□□□□ 0.33
PSME3-217ENST00000622892 PER1O15534 1290 aaPredicted RBP17.11■□□□□ 0.33
PSME3-217ENST00000622892 NUTM2DQ5VT03 806 aaPredicted RBP17.11■□□□□ 0.33
PSME3-217ENST00000622892 PPM1GO15355 546 aaPredicted RBP17.11■□□□□ 0.33
PSME3-217ENST00000622892 PRKCSHP14314 528 aaPredicted RBP17.1■□□□□ 0.33
PSME3-217ENST00000622892 POGZQ7Z3K3 1410 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms