RNA–Protein interactions for RNA: ENST00000622680.1

LINC00963-214, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 781 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-214ENST00000622680 ZNF335Q9H4Z2 1342 aaPredicted RBP17.68■□□□□ 0.42
LINC00963-214ENST00000622680 RTEL1-TNFRSF6BF6WH68 1400 aa17.67■□□□□ 0.42
LINC00963-214ENST00000622680 RNF17Q9BXT8 1623 aaKnown RBP17.66■□□□□ 0.42
LINC00963-214ENST00000622680 ZC3H13Q5T200 1668 aaKnown RBP17.65■□□□□ 0.42
LINC00963-214ENST00000622680 FAM135AQ9P2D6 1515 aa17.65■□□□□ 0.42
LINC00963-214ENST00000622680 ILDR2Q71H61 639 aa17.64■□□□□ 0.41
LINC00963-214ENST00000622680 DHX29Q7Z478 1369 aaKnown RBP17.64■□□□□ 0.41
LINC00963-214ENST00000622680 PZPP20742 1482 aa17.63■□□□□ 0.41
LINC00963-214ENST00000622680 CROCC2H7BZ55 1655 aa17.63■□□□□ 0.41
LINC00963-214ENST00000622680 EIF2AK4Q9P2K8 1649 aaKnown RBP17.61■□□□□ 0.41
LINC00963-214ENST00000622680 STRCP1A6NGW2 1772 aa17.61■□□□□ 0.41
LINC00963-214ENST00000622680 MAST1Q9Y2H9 1570 aa17.61■□□□□ 0.41
LINC00963-214ENST00000622680 PKD2Q13563 968 aa17.6■□□□□ 0.41
LINC00963-214ENST00000622680 IQGAP1P46940 1657 aa17.6■□□□□ 0.41
LINC00963-214ENST00000622680 MROH1Q8NDA8 1641 aa17.59■□□□□ 0.41
LINC00963-214ENST00000622680 TNRQ92752 1358 aa17.58■□□□□ 0.4
LINC00963-214ENST00000622680 KIF3BO15066 747 aa17.58■□□□□ 0.4
LINC00963-214ENST00000622680 PPP6R1Q9UPN7 881 aa17.58■□□□□ 0.4
LINC00963-214ENST00000622680 DEPDC5O75140 1603 aa17.58■□□□□ 0.4
LINC00963-214ENST00000622680 FBXO31Q5XUX0 539 aaPredicted RBP17.57■□□□□ 0.4
LINC00963-214ENST00000622680 LRRC9Q6ZRR7 1453 aa17.56■□□□□ 0.4
LINC00963-214ENST00000622680 UBR1Q8IWV7 1749 aa17.56■□□□□ 0.4
LINC00963-214ENST00000622680 VWDEQ8N2E2 1590 aa17.56■□□□□ 0.4
LINC00963-214ENST00000622680 UGGT1Q9NYU2 1555 aa17.56■□□□□ 0.4
LINC00963-214ENST00000622680 ABCC3O15438 1527 aa17.56■□□□□ 0.4
LINC00963-214ENST00000622680 UBAP1LF5GYI3 381 aa17.55■□□□□ 0.4
LINC00963-214ENST00000622680 VPS8Q8N3P4 1428 aa17.55■□□□□ 0.4
LINC00963-214ENST00000622680 CPS1P31327 1500 aa17.53■□□□□ 0.4
LINC00963-214ENST00000622680 NLRP1Q9C000 1473 aa17.52■□□□□ 0.4
LINC00963-214ENST00000622680 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.52■□□□□ 0.39
LINC00963-214ENST00000622680 XIRP1Q702N8 1843 aaKnown RBP17.51■□□□□ 0.39
LINC00963-214ENST00000622680 WASHC2CQ9Y4E1 1318 aa17.51■□□□□ 0.39
LINC00963-214ENST00000622680 SHANK2Q9UPX8 1470 aa17.5■□□□□ 0.39
LINC00963-214ENST00000622680 ALKQ9UM73 1620 aa17.5■□□□□ 0.39
LINC00963-214ENST00000622680 MIA2Q96PC5 1412 aa17.49■□□□□ 0.39
LINC00963-214ENST00000622680 SOCS7O14512 581 aa17.49■□□□□ 0.39
LINC00963-214ENST00000622680 SYNMO15061 1565 aa17.49■□□□□ 0.39
LINC00963-214ENST00000622680 MED1Q15648 1581 aaPredicted RBP17.49■□□□□ 0.39
LINC00963-214ENST00000622680 ERVK-7P63135 1459 aa17.48■□□□□ 0.39
LINC00963-214ENST00000622680 PTPN23Q9H3S7 1636 aa17.47■□□□□ 0.39
LINC00963-214ENST00000622680 MED14O60244 1454 aa17.47■□□□□ 0.39
LINC00963-214ENST00000622680 PRDM15P57071 1507 aaPredicted RBP17.47■□□□□ 0.39
LINC00963-214ENST00000622680 MAP3K1Q13233 1512 aa17.47■□□□□ 0.39
LINC00963-214ENST00000622680 NPHP4O75161 1426 aaPredicted RBP17.47■□□□□ 0.39
LINC00963-214ENST00000622680 MYOM3Q5VTT5 1437 aa17.47■□□□□ 0.39
LINC00963-214ENST00000622680 RSPH4AQ5TD94 716 aa17.46■□□□□ 0.39
LINC00963-214ENST00000622680 DUOX2Q9NRD8 1548 aa17.45■□□□□ 0.38
LINC00963-214ENST00000622680 SCAF1Q9H7N4 1312 aaKnown RBP17.45■□□□□ 0.38
LINC00963-214ENST00000622680 PIK3C2BO00750 1634 aa17.44■□□□□ 0.38
LINC00963-214ENST00000622680 TSPY4P0CV99 314 aa17.44■□□□□ 0.38
LINC00963-214ENST00000622680 TSPY10P0CW01 314 aa17.44■□□□□ 0.38
LINC00963-214ENST00000622680 KANK4Q5T7N3 995 aaPredicted RBP17.44■□□□□ 0.38
LINC00963-214ENST00000622680 MYO5BQ9ULV0 1848 aa17.43■□□□□ 0.38
LINC00963-214ENST00000622680 LOC105371045A0A1W2PR82 267 aa17.43■□□□□ 0.38
LINC00963-214ENST00000622680 PIP4K2BP78356 416 aa17.41■□□□□ 0.38
LINC00963-214ENST00000622680 ANKLE2Q86XL3 938 aa17.41■□□□□ 0.38
LINC00963-214ENST00000622680 THEMISQ8N1K5 641 aaPredicted RBP17.4■□□□□ 0.38
LINC00963-214ENST00000622680 HSPA1LP34931 641 aa17.39■□□□□ 0.37
LINC00963-214ENST00000622680 LRRC7Q96NW7 1537 aa17.37■□□□□ 0.37
LINC00963-214ENST00000622680 KDM5AP29375 1690 aaKnown RBP17.37■□□□□ 0.37
LINC00963-214ENST00000622680 KIF15Q9NS87 1388 aa17.36■□□□□ 0.37
LINC00963-214ENST00000622680 SCAF11Q99590 1463 aaKnown RBP17.36■□□□□ 0.37
LINC00963-214ENST00000622680 SLIT1O75093 1534 aa17.36■□□□□ 0.37
LINC00963-214ENST00000622680 ERBINQ96RT1 1412 aa17.35■□□□□ 0.37
LINC00963-214ENST00000622680 ABCC5O15440 1437 aa17.34■□□□□ 0.37
LINC00963-214ENST00000622680 TOM1O60784 492 aa17.34■□□□□ 0.37
LINC00963-214ENST00000622680 ARHGAP23Q9P227 1491 aa17.34■□□□□ 0.37
LINC00963-214ENST00000622680 DAPK1P53355 1430 aa17.33■□□□□ 0.36
LINC00963-214ENST00000622680 GCC2Q8IWJ2 1684 aa17.32■□□□□ 0.36
LINC00963-214ENST00000622680 ARHGAP31Q2M1Z3 1444 aa17.3■□□□□ 0.36
LINC00963-214ENST00000622680 FGD6Q6ZV73 1430 aa17.3■□□□□ 0.36
LINC00963-214ENST00000622680 SENP3Q9H4L4 574 aaPredicted RBP17.3■□□□□ 0.36
LINC00963-214ENST00000622680 EFCAB6Q5THR3 1501 aa17.29■□□□□ 0.36
LINC00963-214ENST00000622680 RRP7BPQ9NSQ0 103 aa17.28■□□□□ 0.36
LINC00963-214ENST00000622680 ADGRB3O60242 1522 aa17.26■□□□□ 0.35
LINC00963-214ENST00000622680 LMTK2Q8IWU2 1503 aa17.26■□□□□ 0.35
LINC00963-214ENST00000622680 LTKP29376 864 aa17.26■□□□□ 0.35
LINC00963-214ENST00000622680 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.26■□□□□ 0.35
LINC00963-214ENST00000622680 ROBO1Q9Y6N7 1651 aa17.25■□□□□ 0.35
LINC00963-214ENST00000622680 CHD2O14647 1828 aaKnown RBP17.24■□□□□ 0.35
LINC00963-214ENST00000622680 TET3O43151 1660 aa17.24■□□□□ 0.35
LINC00963-214ENST00000622680 KANK1Q14678 1352 aa17.23■□□□□ 0.35
LINC00963-214ENST00000622680 TXNDC2Q86VQ3 553 aa17.22■□□□□ 0.35
LINC00963-214ENST00000622680 CHIC2Q9UKJ5 165 aa17.22■□□□□ 0.35
LINC00963-214ENST00000622680 NWD1Q149M9 1564 aa17.22■□□□□ 0.35
LINC00963-214ENST00000622680 TMEM2Q9UHN6 1383 aa17.21■□□□□ 0.35
LINC00963-214ENST00000622680 ADGRL2O95490 1459 aa17.2■□□□□ 0.34
LINC00963-214ENST00000622680 ANKRD30AQ9BXX3 1397 aa17.2■□□□□ 0.34
LINC00963-214ENST00000622680 E9PCH4 1651 aa17.2■□□□□ 0.34
LINC00963-214ENST00000622680 UNC13BO14795 1591 aa17.19■□□□□ 0.34
LINC00963-214ENST00000622680 APLP2Q06481 763 aa17.19■□□□□ 0.34
LINC00963-214ENST00000622680 PHF23Q9BUL5 403 aaPredicted RBP17.18■□□□□ 0.34
LINC00963-214ENST00000622680 NOS1P29475 1434 aa17.18■□□□□ 0.34
LINC00963-214ENST00000622680 PHLPP1O60346 1717 aa17.18■□□□□ 0.34
LINC00963-214ENST00000622680 EID1Q9Y6B2 187 aa17.17■□□□□ 0.34
LINC00963-214ENST00000622680 TMEM131LA2VDJ0 1609 aa17.17■□□□□ 0.34
LINC00963-214ENST00000622680 STAG3Q9UJ98 1225 aa17.16■□□□□ 0.34
LINC00963-214ENST00000622680 SETD1AO15047 1707 aaKnown RBP17.14■□□□□ 0.33
LINC00963-214ENST00000622680 IDI1Q13907 227 aa17.14■□□□□ 0.33
LINC00963-214ENST00000622680 NKTRP30414 1462 aaKnown RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms