RNA–Protein interactions for RNA: ENST00000622209.4

PMPCA-212, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 1 (best)

Gene PMPCA, Length 1,013 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-212ENST00000622209 PKD2Q13563 968 aa32.85■■■□□ 2.85
PMPCA-212ENST00000622209 CEP170BQ9Y4F5 1589 aaPredicted RBP32.83■■■□□ 2.85
PMPCA-212ENST00000622209 MYOM3Q5VTT5 1437 aa32.82■■■□□ 2.84
PMPCA-212ENST00000622209 TNRQ92752 1358 aa32.81■■■□□ 2.84
PMPCA-212ENST00000622209 LTBP4Q8N2S1 1624 aa32.8■■■□□ 2.84
PMPCA-212ENST00000622209 PLA2R1Q13018 1463 aa32.8■■■□□ 2.84
PMPCA-212ENST00000622209 MIA2Q96PC5 1412 aa32.79■■■□□ 2.84
PMPCA-212ENST00000622209 KDM5DQ9BY66 1539 aa32.79■■■□□ 2.84
PMPCA-212ENST00000622209 ZNF335Q9H4Z2 1342 aaPredicted RBP32.78■■■□□ 2.84
PMPCA-212ENST00000622209 A2ML1A8K2U0 1454 aa32.78■■■□□ 2.84
PMPCA-212ENST00000622209 ZNF142P52746 1687 aaPredicted RBP32.76■■■□□ 2.84
PMPCA-212ENST00000622209 PZPP20742 1482 aa32.76■■■□□ 2.84
PMPCA-212ENST00000622209 TCOF1Q13428 1488 aaKnown RBP32.75■■■□□ 2.83
PMPCA-212ENST00000622209 FAM135AQ9P2D6 1515 aa32.71■■■□□ 2.83
PMPCA-212ENST00000622209 MAST1Q9Y2H9 1570 aa32.7■■■□□ 2.82
PMPCA-212ENST00000622209 DNMT1P26358 1616 aaKnown RBP32.69■■■□□ 2.82
PMPCA-212ENST00000622209 THEMISQ8N1K5 641 aaPredicted RBP32.64■■■□□ 2.82
PMPCA-212ENST00000622209 RRP7BPQ9NSQ0 103 aa32.64■■■□□ 2.82
PMPCA-212ENST00000622209 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.63■■■□□ 2.81
PMPCA-212ENST00000622209 IQSEC2Q5JU85 1478 aa32.62■■■□□ 2.81
PMPCA-212ENST00000622209 ANKLE2Q86XL3 938 aa32.62■■■□□ 2.81
PMPCA-212ENST00000622209 ABCC5O15440 1437 aa32.61■■■□□ 2.81
PMPCA-212ENST00000622209 ABCC3O15438 1527 aa32.61■■■□□ 2.81
PMPCA-212ENST00000622209 NLRP1Q9C000 1473 aa32.59■■■□□ 2.81
PMPCA-212ENST00000622209 RNF17Q9BXT8 1623 aaKnown RBP32.59■■■□□ 2.81
PMPCA-212ENST00000622209 KIF15Q9NS87 1388 aa32.58■■■□□ 2.81
PMPCA-212ENST00000622209 UBAP1LF5GYI3 381 aa32.58■■■□□ 2.81
PMPCA-212ENST00000622209 DUOX2Q9NRD8 1548 aa32.56■■■□□ 2.8
PMPCA-212ENST00000622209 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.55■■■□□ 2.82e-6■■■□□ 16.5
PMPCA-212ENST00000622209 CHIC2Q9UKJ5 165 aa32.55■■■□□ 2.8
PMPCA-212ENST00000622209 PTPN23Q9H3S7 1636 aa32.54■■■□□ 2.8
PMPCA-212ENST00000622209 UGGT1Q9NYU2 1555 aa32.53■■■□□ 2.8
PMPCA-212ENST00000622209 FGD6Q6ZV73 1430 aa32.53■■■□□ 2.8
PMPCA-212ENST00000622209 EIF2AK4Q9P2K8 1649 aaKnown RBP32.53■■■□□ 2.8
PMPCA-212ENST00000622209 DAPK1P53355 1430 aa32.51■■■□□ 2.8
PMPCA-212ENST00000622209 MROH1Q8NDA8 1641 aa32.51■■■□□ 2.79
PMPCA-212ENST00000622209 SHANK2Q9UPX8 1470 aa32.5■■■□□ 2.79
PMPCA-212ENST00000622209 NEURL4Q96JN8 1562 aa32.49■■■□□ 2.79
PMPCA-212ENST00000622209 ERVK-7P63135 1459 aa32.49■■■□□ 2.79
PMPCA-212ENST00000622209 DISP3Q9P2K9 1392 aa32.48■■■□□ 2.79
PMPCA-212ENST00000622209 SPATA31D1Q6ZQQ2 1576 aa32.47■■■□□ 2.79
PMPCA-212ENST00000622209 ERBINQ96RT1 1412 aa32.46■■■□□ 2.79
PMPCA-212ENST00000622209 ZC3H13Q5T200 1668 aaKnown RBP32.46■■■□□ 2.79
PMPCA-212ENST00000622209 NPHP4O75161 1426 aaPredicted RBP32.45■■■□□ 2.79
PMPCA-212ENST00000622209 ANKRD30AQ9BXX3 1397 aa32.43■■■□□ 2.78
PMPCA-212ENST00000622209 POLR1AO95602 1720 aaPredicted RBP32.42■■■□□ 2.78
PMPCA-212ENST00000622209 FAM50AQ14320 339 aaKnown RBP32.41■■■□□ 2.78
PMPCA-212ENST00000622209 PPARGC1BQ86YN6 1023 aaKnown RBP32.4■■■□□ 2.78
PMPCA-212ENST00000622209 CEP152O94986 1710 aa32.4■■■□□ 2.78
PMPCA-212ENST00000622209 MED14O60244 1454 aa32.39■■■□□ 2.78
PMPCA-212ENST00000622209 CROCC2H7BZ55 1655 aa32.39■■■□□ 2.78
PMPCA-212ENST00000622209 KANK1Q14678 1352 aa32.38■■■□□ 2.77
PMPCA-212ENST00000622209 PRDM15P57071 1507 aaPredicted RBP32.36■■■□□ 2.77
PMPCA-212ENST00000622209 ARHGAP31Q2M1Z3 1444 aa32.36■■■□□ 2.77
PMPCA-212ENST00000622209 SCAF1Q9H7N4 1312 aaKnown RBP32.36■■■□□ 2.77
PMPCA-212ENST00000622209 CPS1P31327 1500 aa32.36■■■□□ 2.77
PMPCA-212ENST00000622209 PIP4K2BP78356 416 aa32.35■■■□□ 2.77
PMPCA-212ENST00000622209 DEPDC5O75140 1603 aa32.33■■■□□ 2.77
PMPCA-212ENST00000622209 VWDEQ8N2E2 1590 aa32.32■■■□□ 2.77
PMPCA-212ENST00000622209 TOM1O60784 492 aa32.32■■■□□ 2.76
PMPCA-212ENST00000622209 ILDR2Q71H61 639 aa32.32■■■□□ 2.76
PMPCA-212ENST00000622209 TXNDC2Q86VQ3 553 aa32.32■■■□□ 2.76
PMPCA-212ENST00000622209 LTKP29376 864 aa32.31■■■□□ 2.76
PMPCA-212ENST00000622209 CFAP65Q6ZU64 1925 aaKnown RBP32.3■■■□□ 2.76
PMPCA-212ENST00000622209 STAG3Q9UJ98 1225 aa32.28■■■□□ 2.76
PMPCA-212ENST00000622209 IQGAP1P46940 1657 aa32.25■■■□□ 2.75
PMPCA-212ENST00000622209 EID1Q9Y6B2 187 aa32.25■■■□□ 2.75
PMPCA-212ENST00000622209 SCAF11Q99590 1463 aaKnown RBP32.24■■■□□ 2.75
PMPCA-212ENST00000622209 IDI1Q13907 227 aa32.24■■■□□ 2.75
PMPCA-212ENST00000622209 UBR1Q8IWV7 1749 aa32.23■■■□□ 2.75
PMPCA-212ENST00000622209 HSPA1LP34931 641 aa32.23■■■□□ 2.75
PMPCA-212ENST00000622209 ADGRL2O95490 1459 aa32.22■■■□□ 2.75
PMPCA-212ENST00000622209 ARHGAP23Q9P227 1491 aa32.2■■■□□ 2.75
PMPCA-212ENST00000622209 LMTK2Q8IWU2 1503 aa32.2■■■□□ 2.74
PMPCA-212ENST00000622209 SLIT1O75093 1534 aa32.18■■■□□ 2.74
PMPCA-212ENST00000622209 TMEM2Q9UHN6 1383 aa32.18■■■□□ 2.74
PMPCA-212ENST00000622209 ANKRD50Q9ULJ7 1429 aa32.17■■■□□ 2.74
PMPCA-212ENST00000622209 LRRC7Q96NW7 1537 aa32.15■■■□□ 2.74
PMPCA-212ENST00000622209 PIK3C2BO00750 1634 aa32.14■■■□□ 2.74
PMPCA-212ENST00000622209 NOS1P29475 1434 aa32.1■■■□□ 2.73
PMPCA-212ENST00000622209 RRBP1Q9P2E9 1410 aaKnown RBP32.1■■■□□ 2.73
PMPCA-212ENST00000622209 SENP3Q9H4L4 574 aaPredicted RBP32.1■■■□□ 2.73
PMPCA-212ENST00000622209 SLC52A1Q9NWF4 448 aa32.09■■■□□ 2.73
PMPCA-212ENST00000622209 EFCAB6Q5THR3 1501 aa32.09■■■□□ 2.73
PMPCA-212ENST00000622209 STRCP1A6NGW2 1772 aa32.09■■■□□ 2.73
PMPCA-212ENST00000622209 SYNMO15061 1565 aa32.07■■■□□ 2.72
PMPCA-212ENST00000622209 SOCS7O14512 581 aa32.06■■■□□ 2.72
PMPCA-212ENST00000622209 ITGAEP38570 1179 aa32.06■■■□□ 2.72
PMPCA-212ENST00000622209 SLC26A8Q96RN1 970 aa32.06■■■□□ 2.72
PMPCA-212ENST00000622209 ALKQ9UM73 1620 aa32.04■■■□□ 2.72
PMPCA-212ENST00000622209 BCANQ96GW7 911 aa32.02■■■□□ 2.72
PMPCA-212ENST00000622209 RPRD2Q5VT52 1461 aaKnown RBP31.98■■■□□ 2.71
PMPCA-212ENST00000622209 ROCK1Q13464 1354 aa31.97■■■□□ 2.71
PMPCA-212ENST00000622209 KCNA6P17658 529 aa31.97■■■□□ 2.71
PMPCA-212ENST00000622209 ADGRB3O60242 1522 aa31.96■■■□□ 2.71
PMPCA-212ENST00000622209 CHGAP10645 457 aaKnown RBP31.94■■■□□ 2.7
PMPCA-212ENST00000622209 RBM33Q96EV2 1170 aaKnown RBP31.94■■■□□ 2.7
PMPCA-212ENST00000622209 KDM5AP29375 1690 aaKnown RBP31.94■■■□□ 2.7
PMPCA-212ENST00000622209 PROSER2Q86WR7 435 aaPredicted RBP31.92■■■□□ 2.7
PMPCA-212ENST00000622209 PPP1R15AO75807 674 aaPredicted RBP31.91■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms