RNA–Protein interactions for RNA: ENST00000622143.1

SRSF4-207, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 614 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-207ENST00000622143 DOK7Q18PE1 504 aa9.13□□□□□ -0.95
SRSF4-207ENST00000622143 HOXB1P14653 301 aaPredicted RBP9.11□□□□□ -0.95
SRSF4-207ENST00000622143 CEP170Q5SW79 1584 aa9.11□□□□□ -0.95
SRSF4-207ENST00000622143 CUX1P39880 1505 aa9.1□□□□□ -0.95
SRSF4-207ENST00000622143 WDR97A6NE52 1622 aa9.1□□□□□ -0.95
SRSF4-207ENST00000622143 FAM69CQ0P6D2 419 aa9.09□□□□□ -0.95
SRSF4-207ENST00000622143 GPR153Q6NV75 609 aa9.09□□□□□ -0.95
SRSF4-207ENST00000622143 TMC2Q8TDI7 906 aa9.09□□□□□ -0.95
SRSF4-207ENST00000622143 ZSWIM6Q9HCJ5 1215 aa9.09□□□□□ -0.95
SRSF4-207ENST00000622143 TSHZ2Q9NRE2 1034 aa9.09□□□□□ -0.95
SRSF4-207ENST00000622143 GPHNQ9NQX3 736 aaPredicted RBP9.08□□□□□ -0.96
SRSF4-207ENST00000622143 ZNF710Q8N1W2 664 aa9.07□□□□□ -0.96
SRSF4-207ENST00000622143 KDM6BO15054 1643 aa9.06□□□□□ -0.96
SRSF4-207ENST00000622143 SLC34A2O95436 690 aa9.06□□□□□ -0.96
SRSF4-207ENST00000622143 FOXK1P85037 733 aa9.06□□□□□ -0.96
SRSF4-207ENST00000622143 CRISPLD2Q9H0B8 497 aa9.06□□□□□ -0.96
SRSF4-207ENST00000622143 NCKAP5LQ9HCH0 1330 aa9.05□□□□□ -0.96
SRSF4-207ENST00000622143 TSPOAP1O95153 1857 aa9.05□□□□□ -0.96
SRSF4-207ENST00000622143 GRIN2AQ12879 1464 aa9.05□□□□□ -0.96
SRSF4-207ENST00000622143 RIMBP2O15034 1052 aa9.05□□□□□ -0.96
SRSF4-207ENST00000622143 ABCA5Q8WWZ7 1642 aa9.04□□□□□ -0.96
SRSF4-207ENST00000622143 DSG2Q14126 1118 aa9.03□□□□□ -0.96
SRSF4-207ENST00000622143 ADAMTS12P58397 1594 aa9.03□□□□□ -0.96
SRSF4-207ENST00000622143 ARSIQ5FYB1 569 aa9.02□□□□□ -0.97
SRSF4-207ENST00000622143 DIP2BQ9P265 1576 aa9.02□□□□□ -0.97
SRSF4-207ENST00000622143 ABCC10Q5T3U5 1492 aa9.02□□□□□ -0.97
SRSF4-207ENST00000622143 CADPS2Q86UW7 1296 aa9.01□□□□□ -0.97
SRSF4-207ENST00000622143 KHSRPQ92945 711 aaKnown RBP eCLIP9.01□□□□□ -0.975e-9■□□□□ 9.8
SRSF4-207ENST00000622143 PRG4Q92954 1404 aaPredicted RBP9.01□□□□□ -0.97
SRSF4-207ENST00000622143 SHROOM2Q13796 1616 aa9.01□□□□□ -0.97
SRSF4-207ENST00000622143 HECW2Q9P2P5 1572 aa9□□□□□ -0.97
SRSF4-207ENST00000622143 NUP160Q12769 1436 aa9□□□□□ -0.97
SRSF4-207ENST00000622143 PLPP6Q8IY26 295 aa9□□□□□ -0.97
SRSF4-207ENST00000622143 VSIG10Q8N0Z9 540 aa9□□□□□ -0.97
SRSF4-207ENST00000622143 PCDHGA4Q9Y5G9 962 aa9□□□□□ -0.97
SRSF4-207ENST00000622143 MYT1LQ9UL68 1186 aa8.99□□□□□ -0.97
SRSF4-207ENST00000622143 KDM2AQ9Y2K7 1162 aa8.99□□□□□ -0.97
SRSF4-207ENST00000622143 ADGRL1O94910 1474 aa8.99□□□□□ -0.97
SRSF4-207ENST00000622143 ABCA10Q8WWZ4 1543 aa8.99□□□□□ -0.97
SRSF4-207ENST00000622143 PTCD2Q8WV60 388 aaKnown RBP8.98□□□□□ -0.97
SRSF4-207ENST00000622143 MFSD10Q14728 455 aa8.97□□□□□ -0.97
SRSF4-207ENST00000622143 TTBK1Q5TCY1 1321 aaPredicted RBP8.97□□□□□ -0.97
SRSF4-207ENST00000622143 ADCY10Q96PN6 1610 aa8.97□□□□□ -0.97
SRSF4-207ENST00000622143 PDE4AP27815 886 aa8.95□□□□□ -0.98
SRSF4-207ENST00000622143 VARS2Q5ST30 1063 aaKnown RBP8.95□□□□□ -0.98
SRSF4-207ENST00000622143 PPP1R15BQ5SWA1 713 aa8.95□□□□□ -0.98
SRSF4-207ENST00000622143 ERBB3P21860 1342 aa8.95□□□□□ -0.98
SRSF4-207ENST00000622143 MAPKBP1O60336 1514 aa8.95□□□□□ -0.98
SRSF4-207ENST00000622143 NUDT7P0C024 238 aa8.94□□□□□ -0.98
SRSF4-207ENST00000622143 ZNF316A6NFI3 1004 aaPredicted RBP8.93□□□□□ -0.98
SRSF4-207ENST00000622143 OXER1Q8TDS5 423 aa8.93□□□□□ -0.98
SRSF4-207ENST00000622143 JPH4Q96JJ6 628 aa8.93□□□□□ -0.98
SRSF4-207ENST00000622143 LARP6Q9BRS8 491 aaKnown RBP8.93□□□□□ -0.98
SRSF4-207ENST00000622143 FHAD1B1AJZ9 1412 aa8.93□□□□□ -0.98
SRSF4-207ENST00000622143 DDX27Q96GQ7 796 aaKnown RBP8.91□□□□□ -0.98
SRSF4-207ENST00000622143 LHX6Q9UPM6 363 aa8.9□□□□□ -0.98
SRSF4-207ENST00000622143 RUSC2Q8N2Y8 1516 aa8.9□□□□□ -0.99
SRSF4-207ENST00000622143 ZNF687Q8N1G0 1237 aa8.89□□□□□ -0.99
SRSF4-207ENST00000622143 WRNQ14191 1432 aaPredicted RBP eCLIP8.88□□□□□ -0.99
SRSF4-207ENST00000622143 PPRC1Q5VV67 1664 aaKnown RBP8.88□□□□□ -0.99
SRSF4-207ENST00000622143 FBXO41Q8TF61 875 aa8.87□□□□□ -0.99
SRSF4-207ENST00000622143 EMILIN3Q9NT22 766 aa8.87□□□□□ -0.99
SRSF4-207ENST00000622143 COL17A1Q9UMD9 1497 aaPredicted RBP8.86□□□□□ -0.99
SRSF4-207ENST00000622143 UPF1Q92900 1129 aaKnown RBP eCLIP8.86□□□□□ -0.99
SRSF4-207ENST00000622143 ERICH3Q5RHP9 1530 aa8.85□□□□□ -0.99
SRSF4-207ENST00000622143 CAMK2BQ13554 666 aa8.85□□□□□ -0.99
SRSF4-207ENST00000622143 TBC1D12O60347 775 aa8.84□□□□□ -0.99
SRSF4-207ENST00000622143 POTEEQ6S8J3 1075 aa8.84□□□□□ -0.99
SRSF4-207ENST00000622143 ASXL2Q76L83 1435 aa8.82□□□□□ -1
SRSF4-207ENST00000622143 PLA2G2EQ9NZK7 142 aa8.82□□□□□ -1
SRSF4-207ENST00000622143 BIVM-ERCC5R4GMW8 1640 aa8.82□□□□□ -1
SRSF4-207ENST00000622143 LMTK3Q96Q04 1460 aa8.82□□□□□ -1
SRSF4-207ENST00000622143 CUL7Q14999 1698 aa8.81□□□□□ -1
SRSF4-207ENST00000622143 TOP2BQ02880 1626 aa8.81□□□□□ -1
SRSF4-207ENST00000622143 ANO8Q9HCE9 1232 aaPredicted RBP8.81□□□□□ -1
SRSF4-207ENST00000622143 WDR70Q9NW82 654 aa8.81□□□□□ -1
SRSF4-207ENST00000622143 PTPRGP23470 1445 aa8.8□□□□□ -1
SRSF4-207ENST00000622143 PSDA5PKW4 1024 aaPredicted RBP8.79□□□□□ -1
SRSF4-207ENST00000622143 ABCC2Q92887 1545 aa8.79□□□□□ -1
SRSF4-207ENST00000622143 EVI5O60447 810 aa8.77□□□□□ -1.01
SRSF4-207ENST00000622143 PBX2P40425 430 aa8.77□□□□□ -1.01
SRSF4-207ENST00000622143 GLI2P10070 1586 aa8.77□□□□□ -1.01
SRSF4-207ENST00000622143 KIF21BO75037 1637 aa8.76□□□□□ -1.01
SRSF4-207ENST00000622143 ILDR2Q71H61 639 aa8.76□□□□□ -1.01
SRSF4-207ENST00000622143 PLB1Q6P1J6 1458 aa8.76□□□□□ -1.01
SRSF4-207ENST00000622143 MAP3K4Q9Y6R4 1608 aa8.76□□□□□ -1.01
SRSF4-207ENST00000622143 EPRSP07814 1512 aaKnown RBP8.75□□□□□ -1.01
SRSF4-207ENST00000622143 KIAA0586Q9BVV6 1533 aa8.75□□□□□ -1.01
SRSF4-207ENST00000622143 FOSBP53539 338 aa8.75□□□□□ -1.01
SRSF4-207ENST00000622143 LSM11P83369 360 aaKnown RBP eCLIP8.75□□□□□ -1.01
SRSF4-207ENST00000622143 KCNV2Q8TDN2 545 aa8.75□□□□□ -1.01
SRSF4-207ENST00000622143 AXIN2Q9Y2T1 843 aa8.75□□□□□ -1.01
SRSF4-207ENST00000622143 SUPT5HO00267 1087 aaKnown RBP8.74□□□□□ -1.01
SRSF4-207ENST00000622143 MAP3K9P80192 1104 aa8.74□□□□□ -1.01
SRSF4-207ENST00000622143 PPP4R3BQ5MIZ7 849 aa8.74□□□□□ -1.01
SRSF4-207ENST00000622143 TEX14Q8IWB6 1497 aa8.73□□□□□ -1.01
SRSF4-207ENST00000622143 DPYSL4O14531 572 aa8.73□□□□□ -1.01
SRSF4-207ENST00000622143 P3H3Q8IVL6 736 aa8.73□□□□□ -1.01
SRSF4-207ENST00000622143 BCANQ96GW7 911 aa8.73□□□□□ -1.01
SRSF4-207ENST00000622143 DISP3Q9P2K9 1392 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms