RNA–Protein interactions for RNA: ENST00000621152.4

SMC6-210, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 3

Gene SMC6, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-210ENST00000621152 FGD6Q6ZV73 1430 aa31.86■■■□□ 2.69
SMC6-210ENST00000621152 PTPN23Q9H3S7 1636 aa31.86■■■□□ 2.69
SMC6-210ENST00000621152 PTPRTO14522 1441 aa31.85■■■□□ 2.69
SMC6-210ENST00000621152 NCKAP5LQ9HCH0 1330 aa31.85■■■□□ 2.69
SMC6-210ENST00000621152 NCOA1Q15788 1441 aa31.84■■■□□ 2.69
SMC6-210ENST00000621152 KDM5DQ9BY66 1539 aa31.83■■■□□ 2.69
SMC6-210ENST00000621152 CAMSAP1Q5T5Y3 1602 aa31.82■■■□□ 2.69
SMC6-210ENST00000621152 CHIC2Q9UKJ5 165 aa31.82■■■□□ 2.68
SMC6-210ENST00000621152 TNRQ92752 1358 aa31.81■■■□□ 2.68
SMC6-210ENST00000621152 DAPK1P53355 1430 aa31.79■■■□□ 2.68
SMC6-210ENST00000621152 FAM135AQ9P2D6 1515 aa31.79■■■□□ 2.68
SMC6-210ENST00000621152 KIF15Q9NS87 1388 aa31.79■■■□□ 2.68
SMC6-210ENST00000621152 PZPP20742 1482 aa31.78■■■□□ 2.68
SMC6-210ENST00000621152 TCOF1Q13428 1488 aaKnown RBP31.78■■■□□ 2.68
SMC6-210ENST00000621152 FAM50AQ14320 339 aaKnown RBP31.78■■■□□ 2.68
SMC6-210ENST00000621152 DUOX2Q9NRD8 1548 aa31.77■■■□□ 2.68
SMC6-210ENST00000621152 PKD2Q13563 968 aa31.77■■■□□ 2.68
SMC6-210ENST00000621152 MYO3AQ8NEV4 1616 aa31.77■■■□□ 2.68
SMC6-210ENST00000621152 CEP170BQ9Y4F5 1589 aaPredicted RBP31.76■■■□□ 2.67
SMC6-210ENST00000621152 SHANK2Q9UPX8 1470 aa31.74■■■□□ 2.67
SMC6-210ENST00000621152 A2ML1A8K2U0 1454 aa31.73■■■□□ 2.67
SMC6-210ENST00000621152 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.73■■■□□ 2.671e-6■□□□□ 11.1
SMC6-210ENST00000621152 RNF17Q9BXT8 1623 aaKnown RBP31.71■■■□□ 2.67
SMC6-210ENST00000621152 ANKRD30AQ9BXX3 1397 aa31.7■■■□□ 2.67
SMC6-210ENST00000621152 DNMT1P26358 1616 aaKnown RBP31.7■■■□□ 2.66
SMC6-210ENST00000621152 EIF2AK4Q9P2K8 1649 aaKnown RBP31.7■■■□□ 2.66
SMC6-210ENST00000621152 PLA2R1Q13018 1463 aa31.69■■■□□ 2.66
SMC6-210ENST00000621152 ZNF142P52746 1687 aaPredicted RBP31.69■■■□□ 2.66
SMC6-210ENST00000621152 ABCC3O15438 1527 aa31.69■■■□□ 2.66
SMC6-210ENST00000621152 THEMISQ8N1K5 641 aaPredicted RBP31.67■■■□□ 2.66
SMC6-210ENST00000621152 ERBINQ96RT1 1412 aa31.66■■■□□ 2.66
SMC6-210ENST00000621152 CROCC2H7BZ55 1655 aa31.65■■■□□ 2.66
SMC6-210ENST00000621152 PPARGC1BQ86YN6 1023 aaKnown RBP31.64■■■□□ 2.66
SMC6-210ENST00000621152 MROH1Q8NDA8 1641 aa31.62■■■□□ 2.65
SMC6-210ENST00000621152 ANKLE2Q86XL3 938 aa31.61■■■□□ 2.65
SMC6-210ENST00000621152 NLRP1Q9C000 1473 aa31.6■■■□□ 2.65
SMC6-210ENST00000621152 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.59■■■□□ 2.656e-7■■■□□ 19.2
SMC6-210ENST00000621152 KANK1Q14678 1352 aa31.58■■■□□ 2.65
SMC6-210ENST00000621152 ZC3H13Q5T200 1668 aaKnown RBP31.58■■■□□ 2.65
SMC6-210ENST00000621152 ZNF335Q9H4Z2 1342 aaPredicted RBP31.58■■■□□ 2.65
SMC6-210ENST00000621152 LTBP4Q8N2S1 1624 aa31.56■■■□□ 2.64
SMC6-210ENST00000621152 ERVK-7P63135 1459 aa31.55■■■□□ 2.64
SMC6-210ENST00000621152 CEP152O94986 1710 aa31.54■■■□□ 2.64
SMC6-210ENST00000621152 SPATA31D1Q6ZQQ2 1576 aa31.53■■■□□ 2.64
SMC6-210ENST00000621152 UGGT1Q9NYU2 1555 aa31.53■■■□□ 2.64
SMC6-210ENST00000621152 ADGRL2O95490 1459 aa31.51■■■□□ 2.63
SMC6-210ENST00000621152 ARHGAP31Q2M1Z3 1444 aa31.5■■■□□ 2.63
SMC6-210ENST00000621152 PRDM15P57071 1507 aaPredicted RBP31.5■■■□□ 2.63
SMC6-210ENST00000621152 CFAP65Q6ZU64 1925 aaKnown RBP31.49■■■□□ 2.63
SMC6-210ENST00000621152 ITGAEP38570 1179 aa31.45■■■□□ 2.63
SMC6-210ENST00000621152 ANKRD50Q9ULJ7 1429 aa31.45■■■□□ 2.63
SMC6-210ENST00000621152 DEPDC5O75140 1603 aa31.44■■■□□ 2.62
SMC6-210ENST00000621152 NPHP4O75161 1426 aaPredicted RBP31.4■■■□□ 2.62
SMC6-210ENST00000621152 NEURL4Q96JN8 1562 aa31.39■■■□□ 2.62
SMC6-210ENST00000621152 STAG3Q9UJ98 1225 aa31.39■■■□□ 2.62
SMC6-210ENST00000621152 IQSEC2Q5JU85 1478 aa31.39■■■□□ 2.62
SMC6-210ENST00000621152 IDI1Q13907 227 aa31.37■■■□□ 2.61
SMC6-210ENST00000621152 TXNDC2Q86VQ3 553 aa31.37■■■□□ 2.61
SMC6-210ENST00000621152 LMTK2Q8IWU2 1503 aa31.37■■■□□ 2.61
SMC6-210ENST00000621152 POLR1AO95602 1720 aaPredicted RBP31.37■■■□□ 2.61
SMC6-210ENST00000621152 VWDEQ8N2E2 1590 aa31.36■■■□□ 2.61
SMC6-210ENST00000621152 MED14O60244 1454 aa31.35■■■□□ 2.61
SMC6-210ENST00000621152 UBAP1LF5GYI3 381 aa31.34■■■□□ 2.61
SMC6-210ENST00000621152 LTKP29376 864 aa31.34■■■□□ 2.61
SMC6-210ENST00000621152 ROCK1Q13464 1354 aa31.33■■■□□ 2.61
SMC6-210ENST00000621152 EID1Q9Y6B2 187 aa31.32■■■□□ 2.6
SMC6-210ENST00000621152 UBR1Q8IWV7 1749 aa31.29■■■□□ 2.6
SMC6-210ENST00000621152 SLC52A1Q9NWF4 448 aa31.28■■■□□ 2.6
SMC6-210ENST00000621152 NOS1P29475 1434 aa31.26■■■□□ 2.6
SMC6-210ENST00000621152 EFCAB6Q5THR3 1501 aa31.24■■■□□ 2.59
SMC6-210ENST00000621152 TMEM2Q9UHN6 1383 aa31.24■■■□□ 2.59
SMC6-210ENST00000621152 SCAF11Q99590 1463 aaKnown RBP31.24■■■□□ 2.59
SMC6-210ENST00000621152 ARHGAP23Q9P227 1491 aa31.24■■■□□ 2.59
SMC6-210ENST00000621152 PIK3C2BO00750 1634 aa31.23■■■□□ 2.59
SMC6-210ENST00000621152 SLIT1O75093 1534 aa31.22■■■□□ 2.59
SMC6-210ENST00000621152 CPS1P31327 1500 aa31.22■■■□□ 2.59
SMC6-210ENST00000621152 IQGAP1P46940 1657 aa31.22■■■□□ 2.59
SMC6-210ENST00000621152 RPRD2Q5VT52 1461 aaKnown RBP31.19■■■□□ 2.58
SMC6-210ENST00000621152 NUP155O75694 1391 aa31.18■■■□□ 2.58
SMC6-210ENST00000621152 SYNMO15061 1565 aa31.18■■■□□ 2.58
SMC6-210ENST00000621152 TOM1O60784 492 aa31.17■■■□□ 2.58
SMC6-210ENST00000621152 RRBP1Q9P2E9 1410 aaKnown RBP31.14■■■□□ 2.58
SMC6-210ENST00000621152 UNC13BO14795 1591 aa31.13■■■□□ 2.57
SMC6-210ENST00000621152 TET3O43151 1660 aa31.13■■■□□ 2.57
SMC6-210ENST00000621152 PIP4K2BP78356 416 aa31.13■■■□□ 2.57
SMC6-210ENST00000621152 SCAF1Q9H7N4 1312 aaKnown RBP31.12■■■□□ 2.57
SMC6-210ENST00000621152 CHGAP10645 457 aaKnown RBP31.11■■■□□ 2.57
SMC6-210ENST00000621152 BCANQ96GW7 911 aa31.1■■■□□ 2.57
SMC6-210ENST00000621152 HDGFP51858 240 aaKnown RBP31.08■■■□□ 2.57
SMC6-210ENST00000621152 SLC26A8Q96RN1 970 aa31.08■■■□□ 2.57
SMC6-210ENST00000621152 KDM5AP29375 1690 aaKnown RBP31.08■■■□□ 2.57
SMC6-210ENST00000621152 SENP3Q9H4L4 574 aaPredicted RBP31.06■■■□□ 2.56
SMC6-210ENST00000621152 ADGRB3O60242 1522 aa31.05■■■□□ 2.56
SMC6-210ENST00000621152 GCC2Q8IWJ2 1684 aa31.05■■■□□ 2.56
SMC6-210ENST00000621152 LRRC7Q96NW7 1537 aa31.04■■■□□ 2.56
SMC6-210ENST00000621152 STRCP1A6NGW2 1772 aa31.03■■■□□ 2.56
SMC6-210ENST00000621152 IQGAP3Q86VI3 1631 aa31.02■■■□□ 2.56
SMC6-210ENST00000621152 E9PCH4 1651 aa31.01■■■□□ 2.55
SMC6-210ENST00000621152 PPP1R15AO75807 674 aaPredicted RBP31.01■■■□□ 2.55
SMC6-210ENST00000621152 KCNA6P17658 529 aa30.99■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms