RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 KDM5DQ9BY66 1539 aa13.9□□□□□ -0.18
VTA1-205ENST00000620996 ARAP3Q8WWN8 1544 aa13.89□□□□□ -0.19
VTA1-205ENST00000620996 ZFYVE16Q7Z3T8 1539 aa13.88□□□□□ -0.19
VTA1-205ENST00000620996 CNGB1Q14028 1251 aaPredicted RBP13.88□□□□□ -0.19
VTA1-205ENST00000620996 ATP7AQ04656 1500 aa13.87□□□□□ -0.19
VTA1-205ENST00000620996 RAPGEF3O95398 923 aa13.87□□□□□ -0.19
VTA1-205ENST00000620996 RTEL1-TNFRSF6BF6WH68 1400 aa13.86□□□□□ -0.19
VTA1-205ENST00000620996 CARD11Q9BXL7 1154 aa13.86□□□□□ -0.19
VTA1-205ENST00000620996 KANK1Q14678 1352 aa13.86□□□□□ -0.19
VTA1-205ENST00000620996 WASHC2AQ641Q2 1341 aa13.86□□□□□ -0.19
VTA1-205ENST00000620996 UNC13BO14795 1591 aa13.85□□□□□ -0.19
VTA1-205ENST00000620996 FAM69CQ0P6D2 419 aa13.84□□□□□ -0.19
VTA1-205ENST00000620996 GGT6Q6P531 493 aa13.84□□□□□ -0.19
VTA1-205ENST00000620996 C11orf95C9JLR9 678 aaPredicted RBP13.82□□□□□ -0.2
VTA1-205ENST00000620996 ZNF518AQ6AHZ1 1483 aa13.82□□□□□ -0.2
VTA1-205ENST00000620996 USP47Q96K76 1375 aa13.82□□□□□ -0.2
VTA1-205ENST00000620996 RIMBP3CA6NJZ7 1639 aa13.82□□□□□ -0.2
VTA1-205ENST00000620996 RIMBP3BA6NNM3 1639 aa13.82□□□□□ -0.2
VTA1-205ENST00000620996 RIMBP3Q9UFD9 1639 aa13.82□□□□□ -0.2
VTA1-205ENST00000620996 IQGAP3Q86VI3 1631 aa13.81□□□□□ -0.2
VTA1-205ENST00000620996 DHX29Q7Z478 1369 aaKnown RBP13.81□□□□□ -0.2
VTA1-205ENST00000620996 ROCK2O75116 1388 aaKnown RBP13.8□□□□□ -0.2
VTA1-205ENST00000620996 INO80Q9ULG1 1556 aaPredicted RBP13.8□□□□□ -0.2
VTA1-205ENST00000620996 PLA2R1Q13018 1463 aa13.8□□□□□ -0.2
VTA1-205ENST00000620996 POGZQ7Z3K3 1410 aa13.79□□□□□ -0.2
VTA1-205ENST00000620996 CHGAP10645 457 aaKnown RBP13.79□□□□□ -0.2
VTA1-205ENST00000620996 CCDC7Q96M83 1385 aa13.78□□□□□ -0.2
VTA1-205ENST00000620996 KIF7Q2M1P5 1343 aa13.77□□□□□ -0.2
VTA1-205ENST00000620996 MAGI2Q86UL8 1455 aa13.77□□□□□ -0.2
VTA1-205ENST00000620996 CFAP74Q9C0B2 1584 aa13.77□□□□□ -0.21
VTA1-205ENST00000620996 A2MP01023 1474 aa13.76□□□□□ -0.21
VTA1-205ENST00000620996 ST20-MTHFSA0A0A6YYL1 179 aa13.76□□□□□ -0.21
VTA1-205ENST00000620996 NBPF1Q3BBV0 1214 aa13.75□□□□□ -0.21
VTA1-205ENST00000620996 KIDINS220Q9ULH0 1771 aa13.74□□□□□ -0.21
VTA1-205ENST00000620996 WASHC2CQ9Y4E1 1318 aa13.74□□□□□ -0.21
VTA1-205ENST00000620996 RALGAPBQ86X10 1494 aa13.74□□□□□ -0.21
VTA1-205ENST00000620996 UHRF1BP1Q6BDS2 1440 aa13.73□□□□□ -0.21
VTA1-205ENST00000620996 NEO1Q92859 1461 aa13.73□□□□□ -0.21
VTA1-205ENST00000620996 SPATA31E1Q6ZUB1 1445 aa13.72□□□□□ -0.21
VTA1-205ENST00000620996 CNTLNQ9NXG0 1405 aa13.72□□□□□ -0.21
VTA1-205ENST00000620996 E9PCH4 1651 aa13.72□□□□□ -0.21
VTA1-205ENST00000620996 ATP10AO60312 1499 aa13.72□□□□□ -0.21
VTA1-205ENST00000620996 PRAG1Q86YV5 1406 aa13.71□□□□□ -0.21
VTA1-205ENST00000620996 HECW2Q9P2P5 1572 aa13.71□□□□□ -0.21
VTA1-205ENST00000620996 CCER2I3L3R5 266 aa13.7□□□□□ -0.22
VTA1-205ENST00000620996 TSPOAP1O95153 1857 aa13.7□□□□□ -0.22
VTA1-205ENST00000620996 MLH3Q9UHC1 1453 aa13.7□□□□□ -0.22
VTA1-205ENST00000620996 SENP3Q9H4L4 574 aaPredicted RBP13.69□□□□□ -0.22
VTA1-205ENST00000620996 KDM5CP41229 1560 aa13.68□□□□□ -0.22
VTA1-205ENST00000620996 TET3O43151 1660 aa13.68□□□□□ -0.22
VTA1-205ENST00000620996 DEPDC5O75140 1603 aa13.68□□□□□ -0.22
VTA1-205ENST00000620996 UGGT1Q9NYU2 1555 aa13.67□□□□□ -0.22
VTA1-205ENST00000620996 EIF2AK4Q9P2K8 1649 aaKnown RBP13.67□□□□□ -0.22
VTA1-205ENST00000620996 YEATS2Q9ULM3 1422 aa13.67□□□□□ -0.22
VTA1-205ENST00000620996 PRDM15P57071 1507 aaPredicted RBP13.67□□□□□ -0.22
VTA1-205ENST00000620996 TRPM2O94759 1503 aa13.67□□□□□ -0.22
VTA1-205ENST00000620996 ABCA6Q8N139 1617 aa13.67□□□□□ -0.22
VTA1-205ENST00000620996 MLECQ14165 292 aa13.66□□□□□ -0.22
VTA1-205ENST00000620996 MAP3K4Q9Y6R4 1608 aa13.66□□□□□ -0.22
VTA1-205ENST00000620996 SPHKAPQ2M3C7 1700 aa13.66□□□□□ -0.22
VTA1-205ENST00000620996 CLTCL1P53675 1640 aa13.65□□□□□ -0.22
VTA1-205ENST00000620996 MROH1Q8NDA8 1641 aa13.65□□□□□ -0.22
VTA1-205ENST00000620996 CEP152O94986 1710 aa13.65□□□□□ -0.23
VTA1-205ENST00000620996 PTPRTO14522 1441 aa13.64□□□□□ -0.23
VTA1-205ENST00000620996 FRMPD1Q5SYB0 1578 aa13.64□□□□□ -0.23
VTA1-205ENST00000620996 CFAP65Q6ZU64 1925 aaKnown RBP13.64□□□□□ -0.23
VTA1-205ENST00000620996 BCORL1Q5H9F3 1711 aa13.64□□□□□ -0.23
VTA1-205ENST00000620996 DIP2BQ9P265 1576 aa13.64□□□□□ -0.23
VTA1-205ENST00000620996 PRKRIP1Q9H875 184 aaPredicted RBP13.64□□□□□ -0.23
VTA1-205ENST00000620996 MRS2Q9HD23 443 aa13.64□□□□□ -0.23
VTA1-205ENST00000620996 NUTM2DQ5VT03 806 aaPredicted RBP13.63□□□□□ -0.23
VTA1-205ENST00000620996 EFCAB6Q5THR3 1501 aa13.63□□□□□ -0.23
VTA1-205ENST00000620996 FAM9BQ8IZU0 186 aa13.63□□□□□ -0.23
VTA1-205ENST00000620996 VWDEQ8N2E2 1590 aa13.63□□□□□ -0.23
VTA1-205ENST00000620996 TRPM1Q7Z4N2 1603 aa13.62□□□□□ -0.23
VTA1-205ENST00000620996 PPRC1Q5VV67 1664 aaKnown RBP13.62□□□□□ -0.23
VTA1-205ENST00000620996 GLI2P10070 1586 aa13.62□□□□□ -0.23
VTA1-205ENST00000620996 DIP2CQ9Y2E4 1556 aa13.61□□□□□ -0.23
VTA1-205ENST00000620996 HNRNPUQ00839 825 aaKnown RBP eCLIP13.61□□□□□ -0.23
VTA1-205ENST00000620996 CCDC184Q52MB2 194 aa13.61□□□□□ -0.23
VTA1-205ENST00000620996 NPATQ14207 1427 aa13.61□□□□□ -0.23
VTA1-205ENST00000620996 CFAP70Q5T0N1 1121 aa13.6□□□□□ -0.23
VTA1-205ENST00000620996 ADGRF5Q8IZF2 1346 aa13.6□□□□□ -0.23
VTA1-205ENST00000620996 TMF1P82094 1093 aa13.59□□□□□ -0.23
VTA1-205ENST00000620996 RICTORQ6R327 1708 aa13.59□□□□□ -0.23
VTA1-205ENST00000620996 RNF17Q9BXT8 1623 aaKnown RBP13.59□□□□□ -0.23
VTA1-205ENST00000620996 ARID4BQ4LE39 1312 aaPredicted RBP13.58□□□□□ -0.23
VTA1-205ENST00000620996 ABCC3O15438 1527 aa13.58□□□□□ -0.24
VTA1-205ENST00000620996 GPRASP1Q5JY77 1395 aa13.57□□□□□ -0.24
VTA1-205ENST00000620996 ANP32EQ9BTT0 268 aa13.57□□□□□ -0.24
VTA1-205ENST00000620996 STAG3Q9UJ98 1225 aa13.56□□□□□ -0.24
VTA1-205ENST00000620996 DISP3Q9P2K9 1392 aa13.56□□□□□ -0.24
VTA1-205ENST00000620996 LMTK2Q8IWU2 1503 aa13.56□□□□□ -0.24
VTA1-205ENST00000620996 ESF1Q9H501 851 aaKnown RBP13.56□□□□□ -0.24
VTA1-205ENST00000620996 NOS1P29475 1434 aa13.56□□□□□ -0.24
VTA1-205ENST00000620996 POLR1AO95602 1720 aaPredicted RBP13.55□□□□□ -0.24
VTA1-205ENST00000620996 MADDQ8WXG6 1647 aa13.55□□□□□ -0.24
VTA1-205ENST00000620996 SENP3-EIF4A1A0A087X0R7 540 aa13.54□□□□□ -0.24
VTA1-205ENST00000620996 ERICH6Q7L0X2 663 aa13.54□□□□□ -0.24
VTA1-205ENST00000620996 STAC3Q96MF2 364 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms