RNA–Protein interactions for RNA: ENST00000620242.1

SRSF3-206, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-206ENST00000620242 PTPRMP28827 1452 aa19.53■□□□□ 0.72
SRSF3-206ENST00000620242 KANK1Q14678 1352 aa19.51■□□□□ 0.71
SRSF3-206ENST00000620242 ANKRD50Q9ULJ7 1429 aa19.51■□□□□ 0.71
SRSF3-206ENST00000620242 ACIN1Q9UKV3 1341 aaKnown RBP19.5■□□□□ 0.71
SRSF3-206ENST00000620242 WASHC2CQ9Y4E1 1318 aa19.5■□□□□ 0.71
SRSF3-206ENST00000620242 PTPRKQ15262 1439 aa19.49■□□□□ 0.71
SRSF3-206ENST00000620242 RIMS1Q86UR5 1692 aaKnown RBP19.49■□□□□ 0.71
SRSF3-206ENST00000620242 RNF17Q9BXT8 1623 aaKnown RBP19.48■□□□□ 0.71
SRSF3-206ENST00000620242 MROH2AA6NES4 1674 aa19.46■□□□□ 0.71
SRSF3-206ENST00000620242 KDM5DQ9BY66 1539 aa19.46■□□□□ 0.71
SRSF3-206ENST00000620242 ZMYM3Q14202 1370 aa19.44■□□□□ 0.7
SRSF3-206ENST00000620242 ZC3H13Q5T200 1668 aaKnown RBP19.43■□□□□ 0.7
SRSF3-206ENST00000620242 PRDM15P57071 1507 aaPredicted RBP19.42■□□□□ 0.7
SRSF3-206ENST00000620242 NPATQ14207 1427 aa19.42■□□□□ 0.7
SRSF3-206ENST00000620242 HFM1A2PYH4 1435 aa19.41■□□□□ 0.7
SRSF3-206ENST00000620242 DEPDC5O75140 1603 aa19.4■□□□□ 0.7
SRSF3-206ENST00000620242 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.39■□□□□ 0.692e-11■■■□□ 16.6
SRSF3-206ENST00000620242 CLTCQ00610 1675 aaKnown RBP19.39■□□□□ 0.69
SRSF3-206ENST00000620242 SETD1BQ9UPS6 1966 aaKnown RBP19.39■□□□□ 0.69
SRSF3-206ENST00000620242 ABCC3O15438 1527 aa19.37■□□□□ 0.69
SRSF3-206ENST00000620242 NAIPQ13075 1403 aa19.37■□□□□ 0.69
SRSF3-206ENST00000620242 PZPP20742 1482 aa19.36■□□□□ 0.69
SRSF3-206ENST00000620242 PLPPR3Q6T4P5 718 aa19.36■□□□□ 0.69
SRSF3-206ENST00000620242 C3P01024 1663 aa19.36■□□□□ 0.69
SRSF3-206ENST00000620242 LMTK2Q8IWU2 1503 aa19.35■□□□□ 0.69
SRSF3-206ENST00000620242 ARHGAP31Q2M1Z3 1444 aa19.35■□□□□ 0.69
SRSF3-206ENST00000620242 CEBPAP49715 358 aaPredicted RBP19.35■□□□□ 0.69
SRSF3-206ENST00000620242 MROH1Q8NDA8 1641 aa19.35■□□□□ 0.69
SRSF3-206ENST00000620242 UHRF1BP1Q6BDS2 1440 aa19.34■□□□□ 0.69
SRSF3-206ENST00000620242 GCC2Q8IWJ2 1684 aa19.33■□□□□ 0.69
SRSF3-206ENST00000620242 UNC13BO14795 1591 aa19.32■□□□□ 0.68
SRSF3-206ENST00000620242 VWDEQ8N2E2 1590 aa19.32■□□□□ 0.68
SRSF3-206ENST00000620242 NUP155O75694 1391 aa19.32■□□□□ 0.68
SRSF3-206ENST00000620242 RPRD2Q5VT52 1461 aaKnown RBP19.3■□□□□ 0.68
SRSF3-206ENST00000620242 CAMSAP1Q5T5Y3 1602 aa19.29■□□□□ 0.68
SRSF3-206ENST00000620242 PREX1Q8TCU6 1659 aa19.28■□□□□ 0.68
SRSF3-206ENST00000620242 TNRQ92752 1358 aa19.28■□□□□ 0.68
SRSF3-206ENST00000620242 SETD5Q9C0A6 1442 aa19.27■□□□□ 0.68
SRSF3-206ENST00000620242 CEP152O94986 1710 aa19.27■□□□□ 0.68
SRSF3-206ENST00000620242 TRIM52Q96A61 297 aa19.26■□□□□ 0.67
SRSF3-206ENST00000620242 IQGAP3Q86VI3 1631 aa19.25■□□□□ 0.67
SRSF3-206ENST00000620242 TET3O43151 1660 aa19.25■□□□□ 0.67
SRSF3-206ENST00000620242 NLRP1Q9C000 1473 aa19.25■□□□□ 0.67
SRSF3-206ENST00000620242 HRCP23327 699 aa19.25■□□□□ 0.67
SRSF3-206ENST00000620242 EFCAB6Q5THR3 1501 aa19.25■□□□□ 0.67
SRSF3-206ENST00000620242 SPATA31D1Q6ZQQ2 1576 aa19.23■□□□□ 0.67
SRSF3-206ENST00000620242 ERVK-7P63135 1459 aa19.23■□□□□ 0.67
SRSF3-206ENST00000620242 LMTK3Q96Q04 1460 aa19.22■□□□□ 0.67
SRSF3-206ENST00000620242 FBXO31Q5XUX0 539 aaPredicted RBP19.22■□□□□ 0.67
SRSF3-206ENST00000620242 TRIM26Q12899 539 aaPredicted RBP19.21■□□□□ 0.67
SRSF3-206ENST00000620242 SLC52A1Q9NWF4 448 aa19.21■□□□□ 0.67
SRSF3-206ENST00000620242 A2ML1A8K2U0 1454 aa19.2■□□□□ 0.66
SRSF3-206ENST00000620242 THEMISQ8N1K5 641 aaPredicted RBP19.19■□□□□ 0.66
SRSF3-206ENST00000620242 SLC4A1APQ9BWU0 796 aaKnown RBP19.18■□□□□ 0.66
SRSF3-206ENST00000620242 MYO3AQ8NEV4 1616 aa19.18■□□□□ 0.66
SRSF3-206ENST00000620242 NOS1P29475 1434 aa19.17■□□□□ 0.66
SRSF3-206ENST00000620242 CEP170BQ9Y4F5 1589 aaPredicted RBP19.16■□□□□ 0.66
SRSF3-206ENST00000620242 DMRT2Q9Y5R5 561 aa19.16■□□□□ 0.66
SRSF3-206ENST00000620242 ZNF142P52746 1687 aaPredicted RBP19.16■□□□□ 0.66
SRSF3-206ENST00000620242 RAB3GAP2Q9H2M9 1393 aa19.16■□□□□ 0.66
SRSF3-206ENST00000620242 STAG3Q9UJ98 1225 aa19.15■□□□□ 0.66
SRSF3-206ENST00000620242 UGGT1Q9NYU2 1555 aa19.12■□□□□ 0.65
SRSF3-206ENST00000620242 PLA2R1Q13018 1463 aa19.12■□□□□ 0.65
SRSF3-206ENST00000620242 PKD2Q13563 968 aa19.12■□□□□ 0.65
SRSF3-206ENST00000620242 E9PCH4 1651 aa19.11■□□□□ 0.65
SRSF3-206ENST00000620242 CFAP65Q6ZU64 1925 aaKnown RBP19.1■□□□□ 0.65
SRSF3-206ENST00000620242 HDGFP51858 240 aaKnown RBP19.1■□□□□ 0.65
SRSF3-206ENST00000620242 HSPA2P54652 639 aa19.1■□□□□ 0.65
SRSF3-206ENST00000620242 MPHOSPH9Q99550 1183 aa19.1■□□□□ 0.65
SRSF3-206ENST00000620242 ILDR1Q86SU0 546 aaPredicted RBP19.09■□□□□ 0.65
SRSF3-206ENST00000620242 KDM5AP29375 1690 aaKnown RBP19.08■□□□□ 0.65
SRSF3-206ENST00000620242 IDI1Q13907 227 aa19.08■□□□□ 0.64
SRSF3-206ENST00000620242 PTPRTO14522 1441 aa19.08■□□□□ 0.64
SRSF3-206ENST00000620242 ANKLE2Q86XL3 938 aa19.07■□□□□ 0.64
SRSF3-206ENST00000620242 EID1Q9Y6B2 187 aa19.06■□□□□ 0.64
SRSF3-206ENST00000620242 SYNMO15061 1565 aa19.06■□□□□ 0.64
SRSF3-206ENST00000620242 SPHKAPQ2M3C7 1700 aa19.03■□□□□ 0.64
SRSF3-206ENST00000620242 TRPM2O94759 1503 aa19.03■□□□□ 0.64
SRSF3-206ENST00000620242 ADGRB3O60242 1522 aa19.02■□□□□ 0.64
SRSF3-206ENST00000620242 PIK3C2BO00750 1634 aa19.01■□□□□ 0.63
SRSF3-206ENST00000620242 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.01■□□□□ 0.63
SRSF3-206ENST00000620242 UBR1Q8IWV7 1749 aa19■□□□□ 0.63
SRSF3-206ENST00000620242 CHGAP10645 457 aaKnown RBP19■□□□□ 0.63
SRSF3-206ENST00000620242 TMEM2Q9UHN6 1383 aa19■□□□□ 0.63
SRSF3-206ENST00000620242 SLIT1O75093 1534 aa19■□□□□ 0.63
SRSF3-206ENST00000620242 CCDC144AA2RUR9 1427 aa18.99■□□□□ 0.63
SRSF3-206ENST00000620242 ARHGAP23Q9P227 1491 aa18.97■□□□□ 0.63
SRSF3-206ENST00000620242 TXNDC2Q86VQ3 553 aa18.97■□□□□ 0.63
SRSF3-206ENST00000620242 SCAF11Q99590 1463 aaKnown RBP18.96■□□□□ 0.63
SRSF3-206ENST00000620242 MED14O60244 1454 aa18.95■□□□□ 0.62
SRSF3-206ENST00000620242 NCKAP5LQ9HCH0 1330 aa18.95■□□□□ 0.62
SRSF3-206ENST00000620242 TMEM131LA2VDJ0 1609 aa18.94■□□□□ 0.62
SRSF3-206ENST00000620242 STRCQ7RTU9 1775 aa18.93■□□□□ 0.62
SRSF3-206ENST00000620242 PPP1R15AO75807 674 aaPredicted RBP18.93■□□□□ 0.62
SRSF3-206ENST00000620242 ZNF326Q5BKZ1 582 aaKnown RBP18.93■□□□□ 0.62
SRSF3-206ENST00000620242 POLR1AO95602 1720 aaPredicted RBP18.93■□□□□ 0.62
SRSF3-206ENST00000620242 RPGRIP1LQ68CZ1 1315 aa18.93■□□□□ 0.62
SRSF3-206ENST00000620242 NPHP4O75161 1426 aaPredicted RBP18.92■□□□□ 0.62
SRSF3-206ENST00000620242 KIF1BO60333 1816 aa18.91■□□□□ 0.62
SRSF3-206ENST00000620242 FOXD1Q16676 465 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms