RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 PANK2Q9BZ23 570 aa12.62□□□□□ -0.39
TNFAIP3-210ENST00000620204 NCOA1Q15788 1441 aa12.62□□□□□ -0.39
TNFAIP3-210ENST00000620204 NPM1P06748 294 aaKnown RBP eCLIP12.61□□□□□ -0.39
TNFAIP3-210ENST00000620204 HNRNPMP52272 730 aaKnown RBP eCLIP12.61□□□□□ -0.39
TNFAIP3-210ENST00000620204 OSCARQ8IYS5 282 aa12.61□□□□□ -0.39
TNFAIP3-210ENST00000620204 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.61□□□□□ -0.399e-8■■□□□ 12.2
TNFAIP3-210ENST00000620204 UPF2Q9HAU5 1272 aaKnown RBP12.61□□□□□ -0.39
TNFAIP3-210ENST00000620204 PTPRKQ15262 1439 aa12.61□□□□□ -0.39
TNFAIP3-210ENST00000620204 SAMD9Q5K651 1589 aa12.61□□□□□ -0.39
TNFAIP3-210ENST00000620204 MYOM3Q5VTT5 1437 aa12.61□□□□□ -0.39
TNFAIP3-210ENST00000620204 KIAA0556O60303 1618 aa12.6□□□□□ -0.39
TNFAIP3-210ENST00000620204 HECW1Q76N89 1606 aa12.6□□□□□ -0.39
TNFAIP3-210ENST00000620204 TSPY4P0CV99 314 aa12.59□□□□□ -0.39
TNFAIP3-210ENST00000620204 TSPY10P0CW01 314 aa12.59□□□□□ -0.39
TNFAIP3-210ENST00000620204 CENPQQ7L2Z9 268 aaPredicted RBP12.59□□□□□ -0.39
TNFAIP3-210ENST00000620204 UGGT2Q9NYU1 1516 aa12.59□□□□□ -0.39
TNFAIP3-210ENST00000620204 ST20-MTHFSA0A0A6YYL1 179 aa12.58□□□□□ -0.4
TNFAIP3-210ENST00000620204 NAIPQ13075 1403 aa12.58□□□□□ -0.4
TNFAIP3-210ENST00000620204 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.58□□□□□ -0.4
TNFAIP3-210ENST00000620204 NUP160Q12769 1436 aa12.58□□□□□ -0.4
TNFAIP3-210ENST00000620204 MYH16Q9H6N6 1097 aa12.58□□□□□ -0.4
TNFAIP3-210ENST00000620204 USP47Q96K76 1375 aa12.57□□□□□ -0.4
TNFAIP3-210ENST00000620204 MYBBP1AQ9BQG0 1328 aaKnown RBP12.57□□□□□ -0.4
TNFAIP3-210ENST00000620204 NUP153P49790 1475 aaKnown RBP12.57□□□□□ -0.4
TNFAIP3-210ENST00000620204 HFM1A2PYH4 1435 aa12.57□□□□□ -0.4
TNFAIP3-210ENST00000620204 RRP9O43818 475 aaKnown RBP12.57□□□□□ -0.4
TNFAIP3-210ENST00000620204 XRCC6P12956 609 aaKnown RBP eCLIP12.56□□□□□ -0.4
TNFAIP3-210ENST00000620204 PDE3BQ13370 1112 aa12.56□□□□□ -0.4
TNFAIP3-210ENST00000620204 C8orf34Q49A92 452 aa12.56□□□□□ -0.4
TNFAIP3-210ENST00000620204 KTN1Q86UP2 1357 aaKnown RBP12.56□□□□□ -0.4
TNFAIP3-210ENST00000620204 CYB5RLQ6IPT4 315 aa12.55□□□□□ -0.4
TNFAIP3-210ENST00000620204 NLRP13Q86W25 1043 aa12.55□□□□□ -0.4
TNFAIP3-210ENST00000620204 MAGI3Q5TCQ9 1506 aa12.55□□□□□ -0.4
TNFAIP3-210ENST00000620204 EHBP1L1Q8N3D4 1523 aa12.55□□□□□ -0.4
TNFAIP3-210ENST00000620204 CHD1O14646 1710 aa12.55□□□□□ -0.4
TNFAIP3-210ENST00000620204 WDR43Q15061 677 aaKnown RBP eCLIP12.54□□□□□ -0.4
TNFAIP3-210ENST00000620204 CFAP43Q8NDM7 1665 aa12.54□□□□□ -0.4
TNFAIP3-210ENST00000620204 RBM10P98175 930 aaKnown RBP12.54□□□□□ -0.4
TNFAIP3-210ENST00000620204 RALBP1Q15311 655 aa12.54□□□□□ -0.4
TNFAIP3-210ENST00000620204 MAP3K1Q13233 1512 aa12.54□□□□□ -0.4
TNFAIP3-210ENST00000620204 ZBTB7CA1YPR0 619 aa12.54□□□□□ -0.4
TNFAIP3-210ENST00000620204 SUPT6HQ7KZ85 1726 aaKnown RBP12.54□□□□□ -0.4
TNFAIP3-210ENST00000620204 RGL3Q3MIN7 710 aa12.53□□□□□ -0.4
TNFAIP3-210ENST00000620204 RAPGEF6Q8TEU7 1601 aa12.53□□□□□ -0.4
TNFAIP3-210ENST00000620204 KIF15Q9NS87 1388 aa12.52□□□□□ -0.4
TNFAIP3-210ENST00000620204 SEC24BO95487 1268 aa12.51□□□□□ -0.41
TNFAIP3-210ENST00000620204 TROQ12816 1431 aaPredicted RBP12.51□□□□□ -0.41
TNFAIP3-210ENST00000620204 ERCC6L2Q5T890 1561 aa12.5□□□□□ -0.41
TNFAIP3-210ENST00000620204 DHX29Q7Z478 1369 aaKnown RBP12.5□□□□□ -0.41
TNFAIP3-210ENST00000620204 PKD2Q13563 968 aa12.5□□□□□ -0.41
TNFAIP3-210ENST00000620204 FAM13BQ9NYF5 915 aa12.5□□□□□ -0.41
TNFAIP3-210ENST00000620204 ARHGEF11O15085 1522 aa12.5□□□□□ -0.41
TNFAIP3-210ENST00000620204 ESPNB1AK53 854 aa12.49□□□□□ -0.41
TNFAIP3-210ENST00000620204 CCDC146Q8IYE0 955 aa12.49□□□□□ -0.41
TNFAIP3-210ENST00000620204 NEUROD2Q15784 382 aa12.49□□□□□ -0.41
TNFAIP3-210ENST00000620204 ANP32BQ92688 251 aaKnown RBP12.49□□□□□ -0.41
TNFAIP3-210ENST00000620204 ATP10BO94823 1461 aa12.48□□□□□ -0.41
TNFAIP3-210ENST00000620204 CLCN1P35523 988 aa12.48□□□□□ -0.41
TNFAIP3-210ENST00000620204 TRAK2O60296 914 aa12.48□□□□□ -0.41
TNFAIP3-210ENST00000620204 LRRIQ1Q96JM4 1722 aa12.47□□□□□ -0.41
TNFAIP3-210ENST00000620204 FOXD4L1Q9NU39 408 aa12.47□□□□□ -0.41
TNFAIP3-210ENST00000620204 BRD4O60885 1362 aaPredicted RBP12.47□□□□□ -0.41
TNFAIP3-210ENST00000620204 PTPN23Q9H3S7 1636 aa12.46□□□□□ -0.41
TNFAIP3-210ENST00000620204 ADAMTS8Q9UP79 889 aa12.46□□□□□ -0.41
TNFAIP3-210ENST00000620204 COG6Q9Y2V7 657 aa12.46□□□□□ -0.41
TNFAIP3-210ENST00000620204 MFAP1P55081 439 aaKnown RBP12.46□□□□□ -0.42
TNFAIP3-210ENST00000620204 BCAR3O75815 825 aa12.45□□□□□ -0.42
TNFAIP3-210ENST00000620204 NCLP19338 710 aaKnown RBP12.45□□□□□ -0.42
TNFAIP3-210ENST00000620204 MCM4P33991 863 aa12.45□□□□□ -0.42
TNFAIP3-210ENST00000620204 GOLGA2Q08379 1002 aa12.45□□□□□ -0.42
TNFAIP3-210ENST00000620204 KIAA1211Q6ZU35 1233 aa12.44□□□□□ -0.42
TNFAIP3-210ENST00000620204 MRE11P49959 708 aa12.44□□□□□ -0.42
TNFAIP3-210ENST00000620204 CLUAP1Q96AJ1 413 aa12.44□□□□□ -0.42
TNFAIP3-210ENST00000620204 SENP3Q9H4L4 574 aaPredicted RBP12.43□□□□□ -0.42
TNFAIP3-210ENST00000620204 GRPEL1Q9HAV7 217 aa12.43□□□□□ -0.42
TNFAIP3-210ENST00000620204 MSNP26038 577 aaKnown RBP12.43□□□□□ -0.42
TNFAIP3-210ENST00000620204 PANK1Q8TE04 598 aa12.43□□□□□ -0.42
TNFAIP3-210ENST00000620204 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.43□□□□□ -0.42
TNFAIP3-210ENST00000620204 IGHDP01880 384 aa12.42□□□□□ -0.42
TNFAIP3-210ENST00000620204 EFCAB2Q5VUJ9 269 aa12.42□□□□□ -0.42
TNFAIP3-210ENST00000620204 TBC1D2Q9BYX2 928 aa12.42□□□□□ -0.42
TNFAIP3-210ENST00000620204 PANK3Q9H999 370 aa12.42□□□□□ -0.42
TNFAIP3-210ENST00000620204 KIF14Q15058 1648 aa12.42□□□□□ -0.42
TNFAIP3-210ENST00000620204 ROCK2O75116 1388 aaKnown RBP12.41□□□□□ -0.42
TNFAIP3-210ENST00000620204 AFAP1Q8N556 730 aa12.41□□□□□ -0.42
TNFAIP3-210ENST00000620204 BCL2L13Q9BXK5 485 aa12.41□□□□□ -0.42
TNFAIP3-210ENST00000620204 KDM2BQ8NHM5 1336 aa12.41□□□□□ -0.42
TNFAIP3-210ENST00000620204 DAPK1P53355 1430 aa12.4□□□□□ -0.42
TNFAIP3-210ENST00000620204 ANKRD30BQ9BXX2 1392 aa12.4□□□□□ -0.42
TNFAIP3-210ENST00000620204 AMER1Q5JTC6 1135 aaPredicted RBP12.4□□□□□ -0.42
TNFAIP3-210ENST00000620204 R3HCC1Q9Y3T6 440 aaKnown RBP12.4□□□□□ -0.42
TNFAIP3-210ENST00000620204 KDM5BQ9UGL1 1544 aa12.4□□□□□ -0.42
TNFAIP3-210ENST00000620204 PRDM10Q9NQV6 1147 aa12.4□□□□□ -0.42
TNFAIP3-210ENST00000620204 NUP155O75694 1391 aa12.39□□□□□ -0.43
TNFAIP3-210ENST00000620204 ANKRD30AQ9BXX3 1397 aa12.39□□□□□ -0.43
TNFAIP3-210ENST00000620204 ARHGAP5Q13017 1502 aa12.39□□□□□ -0.43
TNFAIP3-210ENST00000620204 GPATCH8Q9UKJ3 1502 aaKnown RBP12.39□□□□□ -0.43
TNFAIP3-210ENST00000620204 HSCBQ8IWL3 235 aa12.39□□□□□ -0.43
TNFAIP3-210ENST00000620204 CAMSAP2Q08AD1 1489 aa12.39□□□□□ -0.43
TNFAIP3-210ENST00000620204 ABCC5O15440 1437 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms