RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 STRCQ7RTU9 1775 aa21.5■■□□□ 1.03
NOP56-220ENST00000616692 ZNF316A6NFI3 1004 aaPredicted RBP21.5■■□□□ 1.03
NOP56-220ENST00000616692 TRAPPC8Q9Y2L5 1435 aa21.49■■□□□ 1.03
NOP56-220ENST00000616692 TIMELESSQ9UNS1 1208 aa21.49■■□□□ 1.03
NOP56-220ENST00000616692 C3P01024 1663 aa21.49■■□□□ 1.03
NOP56-220ENST00000616692 NPATQ14207 1427 aa21.49■■□□□ 1.03
NOP56-220ENST00000616692 PLEKHH2Q8IVE3 1493 aa21.48■■□□□ 1.03
NOP56-220ENST00000616692 CDC42BPAQ5VT25 1732 aa21.47■■□□□ 1.03
NOP56-220ENST00000616692 KIDINS220Q9ULH0 1771 aa21.47■■□□□ 1.03
NOP56-220ENST00000616692 KIAA1107Q9UPP5 1409 aa21.46■■□□□ 1.03
NOP56-220ENST00000616692 SAMD9LQ8IVG5 1584 aa21.44■■□□□ 1.02
NOP56-220ENST00000616692 ESF1Q9H501 851 aaKnown RBP21.43■■□□□ 1.02
NOP56-220ENST00000616692 CEBPAP49715 358 aaPredicted RBP21.41■■□□□ 1.02
NOP56-220ENST00000616692 PPP6R1Q9UPN7 881 aa21.4■■□□□ 1.02
NOP56-220ENST00000616692 GPATCH8Q9UKJ3 1502 aaKnown RBP21.39■■□□□ 1.01
NOP56-220ENST00000616692 NCOA1Q15788 1441 aa21.39■■□□□ 1.01
NOP56-220ENST00000616692 CCER1Q8TC90 406 aaPredicted RBP21.38■■□□□ 1.01
NOP56-220ENST00000616692 PLXNC1O60486 1568 aa21.37■■□□□ 1.01
NOP56-220ENST00000616692 INO80Q9ULG1 1556 aaPredicted RBP21.36■■□□□ 1.01
NOP56-220ENST00000616692 LOC105371045A0A1W2PR82 267 aa21.35■■□□□ 1.01
NOP56-220ENST00000616692 RSPH6AQ9H0K4 717 aa21.34■■□□□ 1.01
NOP56-220ENST00000616692 ATP7AQ04656 1500 aa21.34■■□□□ 1.01
NOP56-220ENST00000616692 LTBP4Q8N2S1 1624 aa21.34■■□□□ 1.01
NOP56-220ENST00000616692 SPAG9O60271 1321 aaKnown RBP21.34■■□□□ 1.01
NOP56-220ENST00000616692 SYCP2Q9BX26 1530 aa21.33■■□□□ 1.01
NOP56-220ENST00000616692 ZNF142P52746 1687 aaPredicted RBP21.33■■□□□ 1.01
NOP56-220ENST00000616692 FAM135AQ9P2D6 1515 aa21.33■■□□□ 1
NOP56-220ENST00000616692 PLA2R1Q13018 1463 aa21.33■■□□□ 1
NOP56-220ENST00000616692 A2MP01023 1474 aa21.3■■□□□ 1
NOP56-220ENST00000616692 ADGBQ8N7X0 1667 aa21.3■■□□□ 1
NOP56-220ENST00000616692 ZMYM3Q14202 1370 aa21.29■■□□□ 1
NOP56-220ENST00000616692 RTEL1-TNFRSF6BF6WH68 1400 aa21.29■■□□□ 1
NOP56-220ENST00000616692 CCNB3Q8WWL7 1395 aa21.29■■□□□ 1
NOP56-220ENST00000616692 BCANQ96GW7 911 aa21.27■■□□□ 1
NOP56-220ENST00000616692 PKD2Q13563 968 aa21.27■■□□□ 1
NOP56-220ENST00000616692 CAMSAP1Q5T5Y3 1602 aa21.26■□□□□ 0.99
NOP56-220ENST00000616692 CFDP1Q9UEE9 299 aaPredicted RBP21.25■□□□□ 0.99
NOP56-220ENST00000616692 PTPRKQ15262 1439 aa21.25■□□□□ 0.99
NOP56-220ENST00000616692 EHBP1L1Q8N3D4 1523 aa21.25■□□□□ 0.99
NOP56-220ENST00000616692 SUPT6HQ7KZ85 1726 aaKnown RBP21.24■□□□□ 0.99
NOP56-220ENST00000616692 MYO3AQ8NEV4 1616 aa21.23■□□□□ 0.99
NOP56-220ENST00000616692 CLTCQ00610 1675 aaKnown RBP21.22■□□□□ 0.99
NOP56-220ENST00000616692 TCOF1Q13428 1488 aaKnown RBP21.22■□□□□ 0.99
NOP56-220ENST00000616692 CEP162Q5TB80 1403 aa21.22■□□□□ 0.99
NOP56-220ENST00000616692 HNRNPMP52272 730 aaKnown RBP eCLIP21.21■□□□□ 0.99
NOP56-220ENST00000616692 MTUS2Q5JR59 1369 aa21.21■□□□□ 0.99
NOP56-220ENST00000616692 CEP170BQ9Y4F5 1589 aaPredicted RBP21.21■□□□□ 0.99
NOP56-220ENST00000616692 ZNF777Q9ULD5 760 aaPredicted RBP21.2■□□□□ 0.98
NOP56-220ENST00000616692 NBR1Q14596 966 aa21.2■□□□□ 0.98
NOP56-220ENST00000616692 MBD5Q9P267 1494 aa21.19■□□□□ 0.98
NOP56-220ENST00000616692 RSPH4AQ5TD94 716 aa21.19■□□□□ 0.98
NOP56-220ENST00000616692 TIAM1Q13009 1591 aa21.19■□□□□ 0.98
NOP56-220ENST00000616692 A2ML1A8K2U0 1454 aa21.17■□□□□ 0.98
NOP56-220ENST00000616692 C11orf95C9JLR9 678 aaPredicted RBP21.17■□□□□ 0.98
NOP56-220ENST00000616692 DHX29Q7Z478 1369 aaKnown RBP21.17■□□□□ 0.98
NOP56-220ENST00000616692 SPATA31D1Q6ZQQ2 1576 aa21.15■□□□□ 0.98
NOP56-220ENST00000616692 DISP3Q9P2K9 1392 aa21.14■□□□□ 0.97
NOP56-220ENST00000616692 RTL5Q5HYW3 569 aaPredicted RBP21.12■□□□□ 0.97
NOP56-220ENST00000616692 SOCS7O14512 581 aa21.11■□□□□ 0.97
NOP56-220ENST00000616692 CCDC141Q6ZP82 1450 aa21.1■□□□□ 0.97
NOP56-220ENST00000616692 ARHGEF5Q12774 1597 aa21.1■□□□□ 0.97
NOP56-220ENST00000616692 KDM5DQ9BY66 1539 aa21.09■□□□□ 0.97
NOP56-220ENST00000616692 FKBP8Q14318 412 aa21.09■□□□□ 0.97
NOP56-220ENST00000616692 PZPP20742 1482 aa21.09■□□□□ 0.97
NOP56-220ENST00000616692 DNMT1P26358 1616 aaKnown RBP21.09■□□□□ 0.97
NOP56-220ENST00000616692 NCKAP5LQ9HCH0 1330 aa21.08■□□□□ 0.97
NOP56-220ENST00000616692 CPS1P31327 1500 aa21.08■□□□□ 0.97
NOP56-220ENST00000616692 PAXIP1Q6ZW49 1069 aaPredicted RBP21.07■□□□□ 0.96
NOP56-220ENST00000616692 HOMEZQ8IX15 550 aa21.07■□□□□ 0.96
NOP56-220ENST00000616692 GGT6Q6P531 493 aa21.06■□□□□ 0.96
NOP56-220ENST00000616692 NLRP1Q9C000 1473 aa21.05■□□□□ 0.96
NOP56-220ENST00000616692 TNRQ92752 1358 aa21.05■□□□□ 0.96
NOP56-220ENST00000616692 POLR1AO95602 1720 aaPredicted RBP21.04■□□□□ 0.96
NOP56-220ENST00000616692 NOP58Q9Y2X3 529 aaKnown RBP21.03■□□□□ 0.96
NOP56-220ENST00000616692 MAST1Q9Y2H9 1570 aa21.02■□□□□ 0.96
NOP56-220ENST00000616692 CAMSAP2Q08AD1 1489 aa21.02■□□□□ 0.96
NOP56-220ENST00000616692 NCOA2Q15596 1464 aa21.02■□□□□ 0.96
NOP56-220ENST00000616692 DEPDC5O75140 1603 aa21.02■□□□□ 0.96
NOP56-220ENST00000616692 ZNF335Q9H4Z2 1342 aaPredicted RBP21.02■□□□□ 0.95
NOP56-220ENST00000616692 BRD2P25440 801 aaKnown RBP21.01■□□□□ 0.95
NOP56-220ENST00000616692 ZNF644Q9H582 1327 aaPredicted RBP21■□□□□ 0.95
NOP56-220ENST00000616692 MED14O60244 1454 aa21■□□□□ 0.95
NOP56-220ENST00000616692 ZC3H13Q5T200 1668 aaKnown RBP21■□□□□ 0.95
NOP56-220ENST00000616692 ILDR2Q71H61 639 aa21■□□□□ 0.95
NOP56-220ENST00000616692 CHMP4AQ9BY43 222 aa21■□□□□ 0.95
NOP56-220ENST00000616692 RNF17Q9BXT8 1623 aaKnown RBP21■□□□□ 0.95
NOP56-220ENST00000616692 NEURL4Q96JN8 1562 aa20.99■□□□□ 0.95
NOP56-220ENST00000616692 DHX37Q8IY37 1157 aaKnown RBP20.99■□□□□ 0.95
NOP56-220ENST00000616692 TULP1O00294 542 aaPredicted RBP20.99■□□□□ 0.95
NOP56-220ENST00000616692 MAP3K1Q13233 1512 aa20.98■□□□□ 0.95
NOP56-220ENST00000616692 EIF2AK4Q9P2K8 1649 aaKnown RBP20.98■□□□□ 0.95
NOP56-220ENST00000616692 UBAP1LF5GYI3 381 aa20.98■□□□□ 0.95
NOP56-220ENST00000616692 MIA2Q96PC5 1412 aa20.97■□□□□ 0.95
NOP56-220ENST00000616692 ZNF326Q5BKZ1 582 aaKnown RBP20.97■□□□□ 0.95
NOP56-220ENST00000616692 SHANK2Q9UPX8 1470 aa20.96■□□□□ 0.95
NOP56-220ENST00000616692 THEMISQ8N1K5 641 aaPredicted RBP20.96■□□□□ 0.95
NOP56-220ENST00000616692 KIF3BO15066 747 aa20.95■□□□□ 0.94
NOP56-220ENST00000616692 ITGAEP38570 1179 aa20.94■□□□□ 0.94
NOP56-220ENST00000616692 ANKLE2Q86XL3 938 aa20.93■□□□□ 0.94
NOP56-220ENST00000616692 WASHC2CQ9Y4E1 1318 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms