RNA–Protein interactions for RNA: ENST00000616568.4

PHF19-214, Transcript of PHD finger protein 19, humanhuman

TSL 1 (best) BASIC

Gene PHF19, Length 4,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF19-214ENST00000616568 LMOD2Q6P5Q4 547 aa12.98□□□□□ -0.33
PHF19-214ENST00000616568 NBPF1Q3BBV0 1214 aa12.97□□□□□ -0.33
PHF19-214ENST00000616568 WASHC2AQ641Q2 1341 aa12.97□□□□□ -0.33
PHF19-214ENST00000616568 NUDCQ9Y266 331 aa12.97□□□□□ -0.33
PHF19-214ENST00000616568 GPATCH8Q9UKJ3 1502 aaKnown RBP12.97□□□□□ -0.33
PHF19-214ENST00000616568 NPM2Q86SE8 214 aaKnown RBP12.96□□□□□ -0.34
PHF19-214ENST00000616568 CCDC141Q6ZP82 1450 aa12.96□□□□□ -0.34
PHF19-214ENST00000616568 AKNAQ7Z591 1439 aa12.95□□□□□ -0.34
PHF19-214ENST00000616568 RAPGEF6Q8TEU7 1601 aa12.95□□□□□ -0.34
PHF19-214ENST00000616568 CCDC7Q96M83 1385 aa12.95□□□□□ -0.34
PHF19-214ENST00000616568 TARBP1Q13395 1621 aaKnown RBP12.94□□□□□ -0.34
PHF19-214ENST00000616568 KIF14Q15058 1648 aa12.94□□□□□ -0.34
PHF19-214ENST00000616568 MAPK8IP3Q9UPT6 1336 aa12.94□□□□□ -0.34
PHF19-214ENST00000616568 KIAA0556O60303 1618 aa12.94□□□□□ -0.34
PHF19-214ENST00000616568 DISP1Q96F81 1524 aa12.94□□□□□ -0.34
PHF19-214ENST00000616568 NUTM2FA1L443 756 aa12.94□□□□□ -0.34
PHF19-214ENST00000616568 NLRP13Q86W25 1043 aa12.94□□□□□ -0.34
PHF19-214ENST00000616568 CFAP70Q5T0N1 1121 aa12.94□□□□□ -0.34
PHF19-214ENST00000616568 HDGFL2Q7Z4V5 671 aaPredicted RBP12.94□□□□□ -0.34
PHF19-214ENST00000616568 NUP160Q12769 1436 aa12.94□□□□□ -0.34
PHF19-214ENST00000616568 WDR97A6NE52 1622 aa12.93□□□□□ -0.34
PHF19-214ENST00000616568 TMEM132EQ6IEE7 984 aa12.93□□□□□ -0.34
PHF19-214ENST00000616568 CD109Q6YHK3 1445 aa12.92□□□□□ -0.34
PHF19-214ENST00000616568 ANKRD30BQ9BXX2 1392 aa12.92□□□□□ -0.34
PHF19-214ENST00000616568 LAS1LQ9Y4W2 734 aaKnown RBP12.92□□□□□ -0.34
PHF19-214ENST00000616568 EID1Q9Y6B2 187 aa12.92□□□□□ -0.34
PHF19-214ENST00000616568 MINK1Q8N4C8 1332 aaPredicted RBP12.9□□□□□ -0.34
PHF19-214ENST00000616568 PBRM1Q86U86 1689 aa12.9□□□□□ -0.34
PHF19-214ENST00000616568 U2AF1L5P0DN76 240 aaPredicted RBP12.89□□□□□ -0.35
PHF19-214ENST00000616568 U2AF1Q01081 240 aaKnown RBP eCLIP12.89□□□□□ -0.35
PHF19-214ENST00000616568 TERF2IPQ9NYB0 399 aa12.88□□□□□ -0.35
PHF19-214ENST00000616568 B4GALNT3Q6L9W6 998 aa12.88□□□□□ -0.35
PHF19-214ENST00000616568 STAC3Q96MF2 364 aa12.88□□□□□ -0.35
PHF19-214ENST00000616568 ANP32AP39687 249 aaKnown RBP12.88□□□□□ -0.35
PHF19-214ENST00000616568 MYBBP1AQ9BQG0 1328 aaKnown RBP12.87□□□□□ -0.35
PHF19-214ENST00000616568 FRAT1Q92837 279 aaPredicted RBP12.87□□□□□ -0.35
PHF19-214ENST00000616568 ADGRL1O94910 1474 aa12.87□□□□□ -0.35
PHF19-214ENST00000616568 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.87□□□□□ -0.35
PHF19-214ENST00000616568 ANP32EQ9BTT0 268 aa12.87□□□□□ -0.35
PHF19-214ENST00000616568 CCDC146Q8IYE0 955 aa12.86□□□□□ -0.35
PHF19-214ENST00000616568 CENPJQ9HC77 1338 aaPredicted RBP12.86□□□□□ -0.35
PHF19-214ENST00000616568 PPP4R2Q9NY27 417 aa12.85□□□□□ -0.35
PHF19-214ENST00000616568 EVC2Q86UK5 1308 aa12.85□□□□□ -0.35
PHF19-214ENST00000616568 FANCAO15360 1455 aa12.85□□□□□ -0.35
PHF19-214ENST00000616568 PAK3O75914 559 aaPredicted RBP12.84□□□□□ -0.35
PHF19-214ENST00000616568 HAP1P54257 671 aaPredicted RBP12.84□□□□□ -0.35
PHF19-214ENST00000616568 RTL5Q5HYW3 569 aaPredicted RBP12.84□□□□□ -0.35
PHF19-214ENST00000616568 CNTLNQ9NXG0 1405 aa12.83□□□□□ -0.36
PHF19-214ENST00000616568 SAMD9Q5K651 1589 aa12.83□□□□□ -0.36
PHF19-214ENST00000616568 CEP170Q5SW79 1584 aa12.83□□□□□ -0.36
PHF19-214ENST00000616568 CFAP43Q8NDM7 1665 aa12.83□□□□□ -0.36
PHF19-214ENST00000616568 ASXL2Q76L83 1435 aa12.82□□□□□ -0.36
PHF19-214ENST00000616568 PLCH2O75038 1416 aa12.82□□□□□ -0.36
PHF19-214ENST00000616568 C11orf95C9JLR9 678 aaPredicted RBP12.82□□□□□ -0.36
PHF19-214ENST00000616568 MAPKBP1O60336 1514 aa12.81□□□□□ -0.36
PHF19-214ENST00000616568 NGDNQ8NEJ9 315 aaKnown RBP12.81□□□□□ -0.36
PHF19-214ENST00000616568 A0A0G2JS52 829 aa12.81□□□□□ -0.36
PHF19-214ENST00000616568 FTSJ3Q8IY81 847 aaKnown RBP12.81□□□□□ -0.36
PHF19-214ENST00000616568 RCAN3Q9UKA8 241 aa12.8□□□□□ -0.36
PHF19-214ENST00000616568 PNNQ9H307 717 aaKnown RBP12.8□□□□□ -0.36
PHF19-214ENST00000616568 CABP2Q9NPB3 220 aa12.79□□□□□ -0.36
PHF19-214ENST00000616568 SLC52A1Q9NWF4 448 aa12.79□□□□□ -0.36
PHF19-214ENST00000616568 TCOF1Q13428 1488 aaKnown RBP12.79□□□□□ -0.36
PHF19-214ENST00000616568 CGNL1Q0VF96 1302 aa12.78□□□□□ -0.36
PHF19-214ENST00000616568 RPRD2Q5VT52 1461 aaKnown RBP12.78□□□□□ -0.36
PHF19-214ENST00000616568 MAGI3Q5TCQ9 1506 aa12.78□□□□□ -0.36
PHF19-214ENST00000616568 RRP7AQ9Y3A4 280 aaKnown RBP12.77□□□□□ -0.36
PHF19-214ENST00000616568 ERBINQ96RT1 1412 aa12.77□□□□□ -0.36
PHF19-214ENST00000616568 TRAPPC8Q9Y2L5 1435 aa12.77□□□□□ -0.36
PHF19-214ENST00000616568 SYCP2Q9BX26 1530 aa12.77□□□□□ -0.36
PHF19-214ENST00000616568 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.76□□□□□ -0.37
PHF19-214ENST00000616568 GOLGA2Q08379 1002 aa12.76□□□□□ -0.37
PHF19-214ENST00000616568 CCDC184Q52MB2 194 aa12.76□□□□□ -0.37
PHF19-214ENST00000616568 WDR7Q9Y4E6 1490 aa12.75□□□□□ -0.37
PHF19-214ENST00000616568 DHX29Q7Z478 1369 aaKnown RBP12.75□□□□□ -0.37
PHF19-214ENST00000616568 FBXO31Q5XUX0 539 aaPredicted RBP12.75□□□□□ -0.37
PHF19-214ENST00000616568 SLC12A5Q9H2X9 1139 aa12.75□□□□□ -0.37
PHF19-214ENST00000616568 PRAM1Q96QH2 718 aa12.74□□□□□ -0.37
PHF19-214ENST00000616568 UPF2Q9HAU5 1272 aaKnown RBP12.74□□□□□ -0.37
PHF19-214ENST00000616568 ZBED9Q6R2W3 1325 aa12.74□□□□□ -0.37
PHF19-214ENST00000616568 ABCC2Q92887 1545 aa12.74□□□□□ -0.37
PHF19-214ENST00000616568 MYH16Q9H6N6 1097 aa12.74□□□□□ -0.37
PHF19-214ENST00000616568 APAF1O14727 1248 aa12.73□□□□□ -0.37
PHF19-214ENST00000616568 TXNDC2Q86VQ3 553 aa12.73□□□□□ -0.37
PHF19-214ENST00000616568 DENND4BO75064 1496 aaPredicted RBP12.73□□□□□ -0.37
PHF19-214ENST00000616568 RGS3P49796 1198 aa12.73□□□□□ -0.37
PHF19-214ENST00000616568 GGNBP2Q9H3C7 697 aa12.73□□□□□ -0.37
PHF19-214ENST00000616568 IDI1Q13907 227 aa12.73□□□□□ -0.37
PHF19-214ENST00000616568 ADGRF5Q8IZF2 1346 aa12.72□□□□□ -0.37
PHF19-214ENST00000616568 ITSN2Q9NZM3 1697 aa12.72□□□□□ -0.37
PHF19-214ENST00000616568 PDE3BQ13370 1112 aa12.71□□□□□ -0.37
PHF19-214ENST00000616568 LTV1Q96GA3 475 aaPredicted RBP12.7□□□□□ -0.38
PHF19-214ENST00000616568 COG3Q96JB2 828 aa12.7□□□□□ -0.38
PHF19-214ENST00000616568 SLC26A8Q96RN1 970 aa12.7□□□□□ -0.38
PHF19-214ENST00000616568 AMPHP49418 695 aa12.69□□□□□ -0.38
PHF19-214ENST00000616568 RTF1Q92541 710 aaKnown RBP12.69□□□□□ -0.38
PHF19-214ENST00000616568 RPGRIP1LQ68CZ1 1315 aa12.68□□□□□ -0.38
PHF19-214ENST00000616568 ADAMTS8Q9UP79 889 aa12.68□□□□□ -0.38
PHF19-214ENST00000616568 PLIN1O60240 522 aa12.67□□□□□ -0.38
PHF19-214ENST00000616568 PPP2R1AP30153 589 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms