RNA–Protein interactions for RNA: ENST00000615116.1

SCAND1-203, Transcript of SCAN domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAND1, Length 1,371 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAND1-203ENST00000615116 TRIM52Q96A61 297 aa27.39■■□□□ 1.98
SCAND1-203ENST00000615116 UNC13BO14795 1591 aa27.38■■□□□ 1.97
SCAND1-203ENST00000615116 DEPDC5O75140 1603 aa27.36■■□□□ 1.97
SCAND1-203ENST00000615116 AGLP35573 1532 aa27.36■■□□□ 1.97
SCAND1-203ENST00000615116 RNF17Q9BXT8 1623 aaKnown RBP27.35■■□□□ 1.97
SCAND1-203ENST00000615116 MLECQ14165 292 aa27.33■■□□□ 1.97
SCAND1-203ENST00000615116 NUP155O75694 1391 aa27.32■■□□□ 1.96
SCAND1-203ENST00000615116 KDM5DQ9BY66 1539 aa27.31■■□□□ 1.96
SCAND1-203ENST00000615116 SIGLEC1Q9BZZ2 1709 aa27.31■■□□□ 1.96
SCAND1-203ENST00000615116 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.31■■□□□ 1.96
SCAND1-203ENST00000615116 PRDM15P57071 1507 aaPredicted RBP27.29■■□□□ 1.96
SCAND1-203ENST00000615116 ADAMTSL3P82987 1691 aa27.29■■□□□ 1.96
SCAND1-203ENST00000615116 MROH1Q8NDA8 1641 aa27.28■■□□□ 1.96
SCAND1-203ENST00000615116 KANK1Q14678 1352 aa27.28■■□□□ 1.96
SCAND1-203ENST00000615116 PTPRMP28827 1452 aa27.28■■□□□ 1.96
SCAND1-203ENST00000615116 IQGAP3Q86VI3 1631 aa27.28■■□□□ 1.96
SCAND1-203ENST00000615116 GGT6Q6P531 493 aa27.26■■□□□ 1.95
SCAND1-203ENST00000615116 DHX57Q6P158 1386 aaKnown RBP27.25■■□□□ 1.95
SCAND1-203ENST00000615116 MADDQ8WXG6 1647 aa27.25■■□□□ 1.95
SCAND1-203ENST00000615116 PZPP20742 1482 aa27.24■■□□□ 1.95
SCAND1-203ENST00000615116 FAM135AQ9P2D6 1515 aa27.24■■□□□ 1.95
SCAND1-203ENST00000615116 MPHOSPH9Q99550 1183 aa27.23■■□□□ 1.95
SCAND1-203ENST00000615116 VWDEQ8N2E2 1590 aa27.23■■□□□ 1.95
SCAND1-203ENST00000615116 SLC4A1APQ9BWU0 796 aaKnown RBP27.22■■□□□ 1.95
SCAND1-203ENST00000615116 PLPPR3Q6T4P5 718 aa27.22■■□□□ 1.95
SCAND1-203ENST00000615116 CCER1Q8TC90 406 aaPredicted RBP27.2■■□□□ 1.94
SCAND1-203ENST00000615116 PPP6R1Q9UPN7 881 aa27.19■■□□□ 1.94
SCAND1-203ENST00000615116 CEP152O94986 1710 aa27.18■■□□□ 1.94
SCAND1-203ENST00000615116 ZC3H13Q5T200 1668 aaKnown RBP27.17■■□□□ 1.94
SCAND1-203ENST00000615116 TET3O43151 1660 aa27.16■■□□□ 1.94
SCAND1-203ENST00000615116 LMTK2Q8IWU2 1503 aa27.16■■□□□ 1.94
SCAND1-203ENST00000615116 WASHC2CQ9Y4E1 1318 aa27.15■■□□□ 1.94
SCAND1-203ENST00000615116 ABCC3O15438 1527 aa27.14■■□□□ 1.94
SCAND1-203ENST00000615116 RIMS1Q86UR5 1692 aaKnown RBP27.14■■□□□ 1.94
SCAND1-203ENST00000615116 PKD2Q13563 968 aa27.13■■□□□ 1.93
SCAND1-203ENST00000615116 CLSPNQ9HAW4 1339 aa27.09■■□□□ 1.93
SCAND1-203ENST00000615116 EFCAB6Q5THR3 1501 aa27.09■■□□□ 1.93
SCAND1-203ENST00000615116 CAMSAP1Q5T5Y3 1602 aa27.09■■□□□ 1.93
SCAND1-203ENST00000615116 ESF1Q9H501 851 aaKnown RBP27.09■■□□□ 1.93
SCAND1-203ENST00000615116 CLTCQ00610 1675 aaKnown RBP27.08■■□□□ 1.93
SCAND1-203ENST00000615116 E9PCH4 1651 aa27.08■■□□□ 1.92
SCAND1-203ENST00000615116 FOXD1Q16676 465 aa27.05■■□□□ 1.92
SCAND1-203ENST00000615116 FER1L4A9Z1Z3 1794 aa27.04■■□□□ 1.92
SCAND1-203ENST00000615116 CNTLNQ9NXG0 1405 aa27.03■■□□□ 1.92
SCAND1-203ENST00000615116 RPRD2Q5VT52 1461 aaKnown RBP27.02■■□□□ 1.92
SCAND1-203ENST00000615116 ARHGAP31Q2M1Z3 1444 aa27.01■■□□□ 1.92
SCAND1-203ENST00000615116 CEBPAP49715 358 aaPredicted RBP27.01■■□□□ 1.91
SCAND1-203ENST00000615116 CFAP65Q6ZU64 1925 aaKnown RBP27.01■■□□□ 1.91
SCAND1-203ENST00000615116 MROH2AA6NES4 1674 aa27■■□□□ 1.91
SCAND1-203ENST00000615116 ANKRD30BQ9BXX2 1392 aa26.99■■□□□ 1.91
SCAND1-203ENST00000615116 NPATQ14207 1427 aa26.99■■□□□ 1.91
SCAND1-203ENST00000615116 SPHKAPQ2M3C7 1700 aa26.98■■□□□ 1.91
SCAND1-203ENST00000615116 ZMYM3Q14202 1370 aa26.94■■□□□ 1.9
SCAND1-203ENST00000615116 LMTK3Q96Q04 1460 aa26.93■■□□□ 1.9
SCAND1-203ENST00000615116 PTPRTO14522 1441 aa26.93■■□□□ 1.9
SCAND1-203ENST00000615116 PREX1Q8TCU6 1659 aa26.91■■□□□ 1.9
SCAND1-203ENST00000615116 TRPM2O94759 1503 aa26.91■■□□□ 1.9
SCAND1-203ENST00000615116 PLA2R1Q13018 1463 aa26.91■■□□□ 1.9
SCAND1-203ENST00000615116 HSPA2P54652 639 aa26.89■■□□□ 1.9
SCAND1-203ENST00000615116 SIN3AQ96ST3 1273 aa26.88■■□□□ 1.89
SCAND1-203ENST00000615116 CCDC144AA2RUR9 1427 aa26.87■■□□□ 1.89
SCAND1-203ENST00000615116 NOS1P29475 1434 aa26.87■■□□□ 1.89
SCAND1-203ENST00000615116 C3P01024 1663 aa26.87■■□□□ 1.89
SCAND1-203ENST00000615116 ERVK-7P63135 1459 aa26.86■■□□□ 1.89
SCAND1-203ENST00000615116 NEUROD1Q13562 356 aa26.85■■□□□ 1.89
SCAND1-203ENST00000615116 SPATA31D1Q6ZQQ2 1576 aa26.84■■□□□ 1.89
SCAND1-203ENST00000615116 FBXO31Q5XUX0 539 aaPredicted RBP26.83■■□□□ 1.88
SCAND1-203ENST00000615116 SYNMO15061 1565 aa26.82■■□□□ 1.88
SCAND1-203ENST00000615116 CLTCL1P53675 1640 aa26.81■■□□□ 1.88
SCAND1-203ENST00000615116 UHRF1BP1Q6BDS2 1440 aa26.79■■□□□ 1.88
SCAND1-203ENST00000615116 ZEB1P37275 1124 aaPredicted RBP26.78■■□□□ 1.88
SCAND1-203ENST00000615116 KIF1BO60333 1816 aa26.77■■□□□ 1.88
SCAND1-203ENST00000615116 PIK3C2BO00750 1634 aa26.77■■□□□ 1.88
SCAND1-203ENST00000615116 SLC52A1Q9NWF4 448 aa26.77■■□□□ 1.88
SCAND1-203ENST00000615116 UGGT1Q9NYU2 1555 aa26.77■■□□□ 1.88
SCAND1-203ENST00000615116 TNRQ92752 1358 aa26.75■■□□□ 1.87
SCAND1-203ENST00000615116 TIMELESSQ9UNS1 1208 aa26.73■■□□□ 1.87
SCAND1-203ENST00000615116 TONSLQ96HA7 1378 aa26.73■■□□□ 1.87
SCAND1-203ENST00000615116 IDI1Q13907 227 aa26.71■■□□□ 1.87
SCAND1-203ENST00000615116 SETD1BQ9UPS6 1966 aaKnown RBP26.7■■□□□ 1.86
SCAND1-203ENST00000615116 NEURL4Q96JN8 1562 aa26.69■■□□□ 1.86
SCAND1-203ENST00000615116 SPATA31E1Q6ZUB1 1445 aa26.67■■□□□ 1.86
SCAND1-203ENST00000615116 ADGRB3O60242 1522 aa26.65■■□□□ 1.86
SCAND1-203ENST00000615116 NLRP1Q9C000 1473 aa26.65■■□□□ 1.86
SCAND1-203ENST00000615116 CHGAP10645 457 aaKnown RBP26.65■■□□□ 1.86
SCAND1-203ENST00000615116 RGL3Q3MIN7 710 aa26.63■■□□□ 1.85
SCAND1-203ENST00000615116 TMEM131LA2VDJ0 1609 aa26.63■■□□□ 1.85
SCAND1-203ENST00000615116 MYO5BQ9ULV0 1848 aa26.63■■□□□ 1.85
SCAND1-203ENST00000615116 L3MBTL2Q969R5 705 aa26.62■■□□□ 1.85
SCAND1-203ENST00000615116 MYO3AQ8NEV4 1616 aa26.61■■□□□ 1.85
SCAND1-203ENST00000615116 STAG3Q9UJ98 1225 aa26.61■■□□□ 1.85
SCAND1-203ENST00000615116 KDM5AP29375 1690 aaKnown RBP26.6■■□□□ 1.85
SCAND1-203ENST00000615116 ZNF326Q5BKZ1 582 aaKnown RBP26.58■■□□□ 1.84
SCAND1-203ENST00000615116 UBR1Q8IWV7 1749 aa26.57■■□□□ 1.84
SCAND1-203ENST00000615116 DCAF11Q8TEB1 546 aa26.55■■□□□ 1.84
SCAND1-203ENST00000615116 A2ML1A8K2U0 1454 aa26.55■■□□□ 1.84
SCAND1-203ENST00000615116 IFT172Q9UG01 1749 aa26.54■■□□□ 1.84
SCAND1-203ENST00000615116 RPGRIP1LQ68CZ1 1315 aa26.54■■□□□ 1.84
SCAND1-203ENST00000615116 ZNF142P52746 1687 aaPredicted RBP26.53■■□□□ 1.84
SCAND1-203ENST00000615116 PPP1R15AO75807 674 aaPredicted RBP26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms