RNA–Protein interactions for RNA: ENST00000614778.4

PDCD6-212, Transcript of programmed cell death 6, humanhuman

TSL 2 BASIC

Gene PDCD6, Length 1,050 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-212ENST00000614778 CHIC2Q9UKJ5 165 aa24.25■■□□□ 1.47
PDCD6-212ENST00000614778 DUOX2Q9NRD8 1548 aa24.25■■□□□ 1.47
PDCD6-212ENST00000614778 RNF17Q9BXT8 1623 aaKnown RBP24.24■■□□□ 1.47
PDCD6-212ENST00000614778 EIF2AK4Q9P2K8 1649 aaKnown RBP24.24■■□□□ 1.47
PDCD6-212ENST00000614778 UHRF1BP1Q6BDS2 1440 aa24.22■■□□□ 1.47
PDCD6-212ENST00000614778 MROH1Q8NDA8 1641 aa24.21■■□□□ 1.47
PDCD6-212ENST00000614778 KDM5DQ9BY66 1539 aa24.21■■□□□ 1.47
PDCD6-212ENST00000614778 NPATQ14207 1427 aa24.21■■□□□ 1.47
PDCD6-212ENST00000614778 PTPRKQ15262 1439 aa24.21■■□□□ 1.47
PDCD6-212ENST00000614778 FAM135AQ9P2D6 1515 aa24.19■■□□□ 1.46
PDCD6-212ENST00000614778 NCOA1Q15788 1441 aa24.18■■□□□ 1.46
PDCD6-212ENST00000614778 WASHC2CQ9Y4E1 1318 aa24.18■■□□□ 1.46
PDCD6-212ENST00000614778 ANKRD30AQ9BXX3 1397 aa24.17■■□□□ 1.46
PDCD6-212ENST00000614778 ADGRL2O95490 1459 aa24.17■■□□□ 1.46
PDCD6-212ENST00000614778 ERBINQ96RT1 1412 aa24.17■■□□□ 1.46
PDCD6-212ENST00000614778 ABCC3O15438 1527 aa24.15■■□□□ 1.46
PDCD6-212ENST00000614778 FBXO31Q5XUX0 539 aaPredicted RBP24.13■■□□□ 1.45
PDCD6-212ENST00000614778 MYO3AQ8NEV4 1616 aa24.13■■□□□ 1.45
PDCD6-212ENST00000614778 PZPP20742 1482 aa24.13■■□□□ 1.45
PDCD6-212ENST00000614778 CEP152O94986 1710 aa24.13■■□□□ 1.45
PDCD6-212ENST00000614778 ZC3H13Q5T200 1668 aaKnown RBP24.11■■□□□ 1.45
PDCD6-212ENST00000614778 STRCQ7RTU9 1775 aa24.11■■□□□ 1.45
PDCD6-212ENST00000614778 PRDM15P57071 1507 aaPredicted RBP24.1■■□□□ 1.45
PDCD6-212ENST00000614778 DEPDC5O75140 1603 aa24.1■■□□□ 1.45
PDCD6-212ENST00000614778 ZNF142P52746 1687 aaPredicted RBP24.08■■□□□ 1.44
PDCD6-212ENST00000614778 CAMSAP1Q5T5Y3 1602 aa24.06■■□□□ 1.44
PDCD6-212ENST00000614778 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.06■■□□□ 1.442e-7■■■■■ 43.8
PDCD6-212ENST00000614778 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.06■■□□□ 1.449e-7■■■■□ 21.2
PDCD6-212ENST00000614778 CEP170BQ9Y4F5 1589 aaPredicted RBP24.06■■□□□ 1.44
PDCD6-212ENST00000614778 TNRQ92752 1358 aa24.05■■□□□ 1.44
PDCD6-212ENST00000614778 ITGAEP38570 1179 aa24.05■■□□□ 1.44
PDCD6-212ENST00000614778 RRBP1Q9P2E9 1410 aaKnown RBP24.04■■□□□ 1.44
PDCD6-212ENST00000614778 ANKRD50Q9ULJ7 1429 aa24.03■■□□□ 1.44
PDCD6-212ENST00000614778 CFAP65Q6ZU64 1925 aaKnown RBP24.03■■□□□ 1.44
PDCD6-212ENST00000614778 VWDEQ8N2E2 1590 aa24.01■■□□□ 1.43
PDCD6-212ENST00000614778 ROCK1Q13464 1354 aa24.01■■□□□ 1.43
PDCD6-212ENST00000614778 A2ML1A8K2U0 1454 aa24■■□□□ 1.43
PDCD6-212ENST00000614778 SPATA31D1Q6ZQQ2 1576 aa23.99■■□□□ 1.43
PDCD6-212ENST00000614778 ERVK-7P63135 1459 aa23.99■■□□□ 1.43
PDCD6-212ENST00000614778 KANK1Q14678 1352 aa23.97■■□□□ 1.43
PDCD6-212ENST00000614778 ARHGAP31Q2M1Z3 1444 aa23.96■■□□□ 1.43
PDCD6-212ENST00000614778 LMTK2Q8IWU2 1503 aa23.95■■□□□ 1.43
PDCD6-212ENST00000614778 NLRP1Q9C000 1473 aa23.94■■□□□ 1.42
PDCD6-212ENST00000614778 NCKAP5LQ9HCH0 1330 aa23.93■■□□□ 1.42
PDCD6-212ENST00000614778 PLA2R1Q13018 1463 aa23.93■■□□□ 1.42
PDCD6-212ENST00000614778 UNC13BO14795 1591 aa23.91■■□□□ 1.42
PDCD6-212ENST00000614778 DMRT2Q9Y5R5 561 aa23.91■■□□□ 1.42
PDCD6-212ENST00000614778 PTPRTO14522 1441 aa23.91■■□□□ 1.42
PDCD6-212ENST00000614778 EFCAB6Q5THR3 1501 aa23.89■■□□□ 1.42
PDCD6-212ENST00000614778 UGGT1Q9NYU2 1555 aa23.88■■□□□ 1.41
PDCD6-212ENST00000614778 TET3O43151 1660 aa23.84■■□□□ 1.41
PDCD6-212ENST00000614778 PKD2Q13563 968 aa23.84■■□□□ 1.41
PDCD6-212ENST00000614778 SYNMO15061 1565 aa23.83■■□□□ 1.41
PDCD6-212ENST00000614778 UBR1Q8IWV7 1749 aa23.83■■□□□ 1.41
PDCD6-212ENST00000614778 POLR1AO95602 1720 aaPredicted RBP23.82■■□□□ 1.4
PDCD6-212ENST00000614778 ILDR1Q86SU0 546 aaPredicted RBP23.82■■□□□ 1.4
PDCD6-212ENST00000614778 THEMISQ8N1K5 641 aaPredicted RBP23.82■■□□□ 1.4
PDCD6-212ENST00000614778 NOS1P29475 1434 aa23.82■■□□□ 1.4
PDCD6-212ENST00000614778 NEURL4Q96JN8 1562 aa23.82■■□□□ 1.4
PDCD6-212ENST00000614778 IQGAP3Q86VI3 1631 aa23.81■■□□□ 1.4
PDCD6-212ENST00000614778 GCC2Q8IWJ2 1684 aa23.81■■□□□ 1.4
PDCD6-212ENST00000614778 NAIPQ13075 1403 aa23.81■■□□□ 1.4
PDCD6-212ENST00000614778 PIK3C2BO00750 1634 aa23.8■■□□□ 1.4
PDCD6-212ENST00000614778 NUP155O75694 1391 aa23.78■■□□□ 1.4
PDCD6-212ENST00000614778 RPRD2Q5VT52 1461 aaKnown RBP23.78■■□□□ 1.4
PDCD6-212ENST00000614778 E9PCH4 1651 aa23.78■■□□□ 1.4
PDCD6-212ENST00000614778 IDI1Q13907 227 aa23.76■■□□□ 1.39
PDCD6-212ENST00000614778 ANKLE2Q86XL3 938 aa23.76■■□□□ 1.39
PDCD6-212ENST00000614778 CERKQ8TCT0 537 aa23.76■■□□□ 1.39
PDCD6-212ENST00000614778 LTBP4Q8N2S1 1624 aa23.76■■□□□ 1.39
PDCD6-212ENST00000614778 HFM1A2PYH4 1435 aa23.73■■□□□ 1.39
PDCD6-212ENST00000614778 ZNF335Q9H4Z2 1342 aaPredicted RBP23.72■■□□□ 1.39
PDCD6-212ENST00000614778 MED14O60244 1454 aa23.71■■□□□ 1.39
PDCD6-212ENST00000614778 ARHGAP23Q9P227 1491 aa23.71■■□□□ 1.39
PDCD6-212ENST00000614778 SLIT1O75093 1534 aa23.7■■□□□ 1.38
PDCD6-212ENST00000614778 KDM5AP29375 1690 aaKnown RBP23.7■■□□□ 1.38
PDCD6-212ENST00000614778 NPHP4O75161 1426 aaPredicted RBP23.69■■□□□ 1.38
PDCD6-212ENST00000614778 LTKP29376 864 aa23.69■■□□□ 1.38
PDCD6-212ENST00000614778 FBXO41Q8TF61 875 aa23.69■■□□□ 1.38
PDCD6-212ENST00000614778 ADGRB3O60242 1522 aa23.68■■□□□ 1.38
PDCD6-212ENST00000614778 IQGAP1P46940 1657 aa23.67■■□□□ 1.38
PDCD6-212ENST00000614778 SLC52A1Q9NWF4 448 aa23.67■■□□□ 1.38
PDCD6-212ENST00000614778 SCAF11Q99590 1463 aaKnown RBP23.67■■□□□ 1.38
PDCD6-212ENST00000614778 STAG3Q9UJ98 1225 aa23.66■■□□□ 1.38
PDCD6-212ENST00000614778 MYO5BQ9ULV0 1848 aa23.66■■□□□ 1.38
PDCD6-212ENST00000614778 TMEM2Q9UHN6 1383 aa23.65■■□□□ 1.38
PDCD6-212ENST00000614778 TXNDC2Q86VQ3 553 aa23.64■■□□□ 1.37
PDCD6-212ENST00000614778 TMEM131LA2VDJ0 1609 aa23.62■■□□□ 1.37
PDCD6-212ENST00000614778 SPHKAPQ2M3C7 1700 aa23.6■■□□□ 1.37
PDCD6-212ENST00000614778 TRIM52Q96A61 297 aa23.59■■□□□ 1.37
PDCD6-212ENST00000614778 EID1Q9Y6B2 187 aa23.58■■□□□ 1.37
PDCD6-212ENST00000614778 STRCP1A6NGW2 1772 aa23.55■■□□□ 1.36
PDCD6-212ENST00000614778 ZFYVE9O95405 1425 aa23.55■■□□□ 1.36
PDCD6-212ENST00000614778 CHGAP10645 457 aaKnown RBP23.54■■□□□ 1.36
PDCD6-212ENST00000614778 IQSEC2Q5JU85 1478 aa23.53■■□□□ 1.36
PDCD6-212ENST00000614778 RIMS2Q9UQ26 1411 aa23.51■■□□□ 1.35
PDCD6-212ENST00000614778 CPS1P31327 1500 aa23.51■■□□□ 1.35
PDCD6-212ENST00000614778 SLC4A1APQ9BWU0 796 aaKnown RBP23.51■■□□□ 1.35
PDCD6-212ENST00000614778 CLTCL1P53675 1640 aa23.51■■□□□ 1.35
PDCD6-212ENST00000614778 TRPM2O94759 1503 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms