RNA–Protein interactions for RNA: ENST00000614478.1

GEN1-208, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

Gene GEN1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-208ENST00000614478 PZPP20742 1482 aa25.65■■□□□ 1.7
GEN1-208ENST00000614478 FOXD1Q16676 465 aa25.62■■□□□ 1.69
GEN1-208ENST00000614478 NUP155O75694 1391 aa25.6■■□□□ 1.69
GEN1-208ENST00000614478 DUOX2Q9NRD8 1548 aa25.6■■□□□ 1.69
GEN1-208ENST00000614478 A2MP01023 1474 aa25.59■■□□□ 1.69
GEN1-208ENST00000614478 SIGLEC1Q9BZZ2 1709 aa25.58■■□□□ 1.69
GEN1-208ENST00000614478 KDM5DQ9BY66 1539 aa25.57■■□□□ 1.68
GEN1-208ENST00000614478 ZNF316A6NFI3 1004 aaPredicted RBP25.56■■□□□ 1.68
GEN1-208ENST00000614478 DHX29Q7Z478 1369 aaKnown RBP25.56■■□□□ 1.68
GEN1-208ENST00000614478 TONSLQ96HA7 1378 aa25.56■■□□□ 1.68
GEN1-208ENST00000614478 ANKRD30BQ9BXX2 1392 aa25.56■■□□□ 1.68
GEN1-208ENST00000614478 AGLP35573 1532 aa25.54■■□□□ 1.68
GEN1-208ENST00000614478 ERBINQ96RT1 1412 aa25.54■■□□□ 1.68
GEN1-208ENST00000614478 PKD2Q13563 968 aa25.53■■□□□ 1.68
GEN1-208ENST00000614478 BCORL1Q5H9F3 1711 aa25.52■■□□□ 1.68
GEN1-208ENST00000614478 EIF2AK4Q9P2K8 1649 aaKnown RBP25.51■■□□□ 1.67
GEN1-208ENST00000614478 UNC13BO14795 1591 aa25.5■■□□□ 1.67
GEN1-208ENST00000614478 PPP1R15AO75807 674 aaPredicted RBP25.5■■□□□ 1.67
GEN1-208ENST00000614478 ARID4BQ4LE39 1312 aaPredicted RBP25.47■■□□□ 1.67
GEN1-208ENST00000614478 FAM135AQ9P2D6 1515 aa25.46■■□□□ 1.67
GEN1-208ENST00000614478 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.45■■□□□ 1.67
GEN1-208ENST00000614478 RPRD2Q5VT52 1461 aaKnown RBP25.44■■□□□ 1.66
GEN1-208ENST00000614478 RNF17Q9BXT8 1623 aaKnown RBP25.42■■□□□ 1.66
GEN1-208ENST00000614478 IQGAP3Q86VI3 1631 aa25.41■■□□□ 1.66
GEN1-208ENST00000614478 KIF3BO15066 747 aa25.4■■□□□ 1.66
GEN1-208ENST00000614478 DEPDC5O75140 1603 aa25.39■■□□□ 1.65
GEN1-208ENST00000614478 ADAMTSL3P82987 1691 aa25.37■■□□□ 1.65
GEN1-208ENST00000614478 FER1L4A9Z1Z3 1794 aa25.36■■□□□ 1.65
GEN1-208ENST00000614478 MLECQ14165 292 aa25.35■■□□□ 1.65
GEN1-208ENST00000614478 L3MBTL2Q969R5 705 aa25.35■■□□□ 1.65
GEN1-208ENST00000614478 MROH1Q8NDA8 1641 aa25.35■■□□□ 1.65
GEN1-208ENST00000614478 PRDM15P57071 1507 aaPredicted RBP25.34■■□□□ 1.65
GEN1-208ENST00000614478 GGT6Q6P531 493 aa25.34■■□□□ 1.65
GEN1-208ENST00000614478 DIEXFQ68CQ4 756 aaKnown RBP25.32■■□□□ 1.64
GEN1-208ENST00000614478 PPP6R1Q9UPN7 881 aa25.32■■□□□ 1.64
GEN1-208ENST00000614478 MADDQ8WXG6 1647 aa25.31■■□□□ 1.64
GEN1-208ENST00000614478 ZC3H13Q5T200 1668 aaKnown RBP25.3■■□□□ 1.64
GEN1-208ENST00000614478 CLTCQ00610 1675 aaKnown RBP25.26■■□□□ 1.63
GEN1-208ENST00000614478 CEP152O94986 1710 aa25.26■■□□□ 1.63
GEN1-208ENST00000614478 VWDEQ8N2E2 1590 aa25.26■■□□□ 1.63
GEN1-208ENST00000614478 RIMS1Q86UR5 1692 aaKnown RBP25.25■■□□□ 1.63
GEN1-208ENST00000614478 KANK1Q14678 1352 aa25.25■■□□□ 1.63
GEN1-208ENST00000614478 CNTLNQ9NXG0 1405 aa25.25■■□□□ 1.63
GEN1-208ENST00000614478 MROH2AA6NES4 1674 aa25.25■■□□□ 1.63
GEN1-208ENST00000614478 ESF1Q9H501 851 aaKnown RBP25.25■■□□□ 1.63
GEN1-208ENST00000614478 ABCC3O15438 1527 aa25.23■■□□□ 1.63
GEN1-208ENST00000614478 WASHC2CQ9Y4E1 1318 aa25.22■■□□□ 1.63
GEN1-208ENST00000614478 PLA2R1Q13018 1463 aa25.22■■□□□ 1.63
GEN1-208ENST00000614478 KDM4FA0A1W2PPD8 638 aa25.21■■□□□ 1.63
GEN1-208ENST00000614478 CCDC144AA2RUR9 1427 aa25.2■■□□□ 1.62
GEN1-208ENST00000614478 E9PCH4 1651 aa25.19■■□□□ 1.62
GEN1-208ENST00000614478 LMTK2Q8IWU2 1503 aa25.19■■□□□ 1.62
GEN1-208ENST00000614478 TET3O43151 1660 aa25.19■■□□□ 1.62
GEN1-208ENST00000614478 CAMSAP1Q5T5Y3 1602 aa25.18■■□□□ 1.62
GEN1-208ENST00000614478 C3P01024 1663 aa25.17■■□□□ 1.62
GEN1-208ENST00000614478 NBPF8Q3BBV2 869 aa25.16■■□□□ 1.62
GEN1-208ENST00000614478 PTPRMP28827 1452 aa25.15■■□□□ 1.62
GEN1-208ENST00000614478 ZMYM3Q14202 1370 aa25.13■■□□□ 1.61
GEN1-208ENST00000614478 EFCAB6Q5THR3 1501 aa25.12■■□□□ 1.61
GEN1-208ENST00000614478 CFAP65Q6ZU64 1925 aaKnown RBP25.12■■□□□ 1.61
GEN1-208ENST00000614478 ARHGAP31Q2M1Z3 1444 aa25.1■■□□□ 1.61
GEN1-208ENST00000614478 HIRIP3Q9BW71 556 aaPredicted RBP25.1■■□□□ 1.61
GEN1-208ENST00000614478 PTPRTO14522 1441 aa25.09■■□□□ 1.61
GEN1-208ENST00000614478 SPHKAPQ2M3C7 1700 aa25.09■■□□□ 1.61
GEN1-208ENST00000614478 TRPM2O94759 1503 aa25.07■■□□□ 1.6
GEN1-208ENST00000614478 SETD1BQ9UPS6 1966 aaKnown RBP25.07■■□□□ 1.6
GEN1-208ENST00000614478 DCAF11Q8TEB1 546 aa25.06■■□□□ 1.6
GEN1-208ENST00000614478 NPATQ14207 1427 aa25.05■■□□□ 1.6
GEN1-208ENST00000614478 UHRF1BP1Q6BDS2 1440 aa25.05■■□□□ 1.6
GEN1-208ENST00000614478 ZNF326Q5BKZ1 582 aaKnown RBP25.05■■□□□ 1.6
GEN1-208ENST00000614478 RGL3Q3MIN7 710 aa25.04■■□□□ 1.6
GEN1-208ENST00000614478 PREX1Q8TCU6 1659 aa25.04■■□□□ 1.6
GEN1-208ENST00000614478 CEBPAP49715 358 aaPredicted RBP25.04■■□□□ 1.6
GEN1-208ENST00000614478 KDM2AQ9Y2K7 1162 aa25.04■■□□□ 1.6
GEN1-208ENST00000614478 EIF4G2P78344 907 aaKnown RBP eCLIP25.02■■□□□ 1.6
GEN1-208ENST00000614478 HSPA5P11021 654 aaKnown RBP25■■□□□ 1.59
GEN1-208ENST00000614478 SPATA31D1Q6ZQQ2 1576 aa25■■□□□ 1.59
GEN1-208ENST00000614478 CLTCL1P53675 1640 aa24.99■■□□□ 1.59
GEN1-208ENST00000614478 PLPPR3Q6T4P5 718 aa24.99■■□□□ 1.59
GEN1-208ENST00000614478 ERVK-7P63135 1459 aa24.99■■□□□ 1.59
GEN1-208ENST00000614478 SPATA31E1Q6ZUB1 1445 aa24.98■■□□□ 1.59
GEN1-208ENST00000614478 FBXO31Q5XUX0 539 aaPredicted RBP24.96■■□□□ 1.59
GEN1-208ENST00000614478 NOS1P29475 1434 aa24.95■■□□□ 1.58
GEN1-208ENST00000614478 RALGAPBQ86X10 1494 aa24.94■■□□□ 1.58
GEN1-208ENST00000614478 PRAG1Q86YV5 1406 aa24.92■■□□□ 1.58
GEN1-208ENST00000614478 TNRQ92752 1358 aa24.92■■□□□ 1.58
GEN1-208ENST00000614478 MIER1Q8N108 512 aa24.92■■□□□ 1.58
GEN1-208ENST00000614478 SYNMO15061 1565 aa24.91■■□□□ 1.58
GEN1-208ENST00000614478 MYO3AQ8NEV4 1616 aa24.91■■□□□ 1.58
GEN1-208ENST00000614478 UGGT1Q9NYU2 1555 aa24.9■■□□□ 1.58
GEN1-208ENST00000614478 DDX10Q13206 875 aaKnown RBP24.89■■□□□ 1.58
GEN1-208ENST00000614478 NLRP1Q9C000 1473 aa24.87■■□□□ 1.57
GEN1-208ENST00000614478 PIK3C2BO00750 1634 aa24.87■■□□□ 1.57
GEN1-208ENST00000614478 ZNF142P52746 1687 aaPredicted RBP24.87■■□□□ 1.57
GEN1-208ENST00000614478 KIF1BO60333 1816 aa24.87■■□□□ 1.57
GEN1-208ENST00000614478 NEURL4Q96JN8 1562 aa24.87■■□□□ 1.57
GEN1-208ENST00000614478 TRPM1Q7Z4N2 1603 aa24.86■■□□□ 1.57
GEN1-208ENST00000614478 CARD11Q9BXL7 1154 aa24.85■■□□□ 1.57
GEN1-208ENST00000614478 USP47Q96K76 1375 aa24.85■■□□□ 1.57
GEN1-208ENST00000614478 SLC52A1Q9NWF4 448 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms