RNA–Protein interactions for RNA: ENST00000613941.4

SRSF3-204, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 4

Gene SRSF3, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-204ENST00000613941 DEPDC5O75140 1603 aa17.58■□□□□ 0.41
SRSF3-204ENST00000613941 HNRNPMP52272 730 aaKnown RBP eCLIP17.58■□□□□ 0.4
SRSF3-204ENST00000613941 CCDC18Q5T9S5 1454 aa17.56■□□□□ 0.4
SRSF3-204ENST00000613941 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.56■□□□□ 0.4
SRSF3-204ENST00000613941 LRRC7Q96NW7 1537 aa17.55■□□□□ 0.4
SRSF3-204ENST00000613941 NPHP4O75161 1426 aaPredicted RBP17.55■□□□□ 0.4
SRSF3-204ENST00000613941 TNRQ92752 1358 aa17.54■□□□□ 0.4
SRSF3-204ENST00000613941 UBTFP17480 764 aaKnown RBP17.54■□□□□ 0.4
SRSF3-204ENST00000613941 GPATCH8Q9UKJ3 1502 aaKnown RBP17.53■□□□□ 0.4
SRSF3-204ENST00000613941 ZC3H13Q5T200 1668 aaKnown RBP17.53■□□□□ 0.4
SRSF3-204ENST00000613941 FBXO31Q5XUX0 539 aaPredicted RBP17.53■□□□□ 0.4
SRSF3-204ENST00000613941 CFAP65Q6ZU64 1925 aaKnown RBP17.52■□□□□ 0.4
SRSF3-204ENST00000613941 UGGT1Q9NYU2 1555 aa17.52■□□□□ 0.39
SRSF3-204ENST00000613941 MED14O60244 1454 aa17.51■□□□□ 0.39
SRSF3-204ENST00000613941 POTEAQ6S8J7 498 aa17.5■□□□□ 0.39
SRSF3-204ENST00000613941 ANKLE2Q86XL3 938 aa17.5■□□□□ 0.39
SRSF3-204ENST00000613941 PZPP20742 1482 aa17.5■□□□□ 0.39
SRSF3-204ENST00000613941 KDM5DQ9BY66 1539 aa17.49■□□□□ 0.39
SRSF3-204ENST00000613941 CASKIN1Q8WXD9 1431 aa17.48■□□□□ 0.39
SRSF3-204ENST00000613941 PLEKHH2Q8IVE3 1493 aa17.47■□□□□ 0.39
SRSF3-204ENST00000613941 FAM135AQ9P2D6 1515 aa17.47■□□□□ 0.39
SRSF3-204ENST00000613941 KIAA1107Q9UPP5 1409 aa17.47■□□□□ 0.39
SRSF3-204ENST00000613941 NLRP1Q9C000 1473 aa17.44■□□□□ 0.38
SRSF3-204ENST00000613941 ROBO1Q9Y6N7 1651 aa17.42■□□□□ 0.38
SRSF3-204ENST00000613941 UBR1Q8IWV7 1749 aa17.42■□□□□ 0.38
SRSF3-204ENST00000613941 THEMISQ8N1K5 641 aaPredicted RBP17.42■□□□□ 0.38
SRSF3-204ENST00000613941 FYCO1Q9BQS8 1478 aa17.42■□□□□ 0.38
SRSF3-204ENST00000613941 MIA2Q96PC5 1412 aa17.41■□□□□ 0.38
SRSF3-204ENST00000613941 CFDP1Q9UEE9 299 aaPredicted RBP17.41■□□□□ 0.38
SRSF3-204ENST00000613941 TIAM1Q13009 1591 aa17.4■□□□□ 0.38
SRSF3-204ENST00000613941 CCNB3Q8WWL7 1395 aa17.39■□□□□ 0.37
SRSF3-204ENST00000613941 KIF3BO15066 747 aa17.38■□□□□ 0.37
SRSF3-204ENST00000613941 ZNF644Q9H582 1327 aaPredicted RBP17.38■□□□□ 0.37
SRSF3-204ENST00000613941 DHX29Q7Z478 1369 aaKnown RBP17.38■□□□□ 0.37
SRSF3-204ENST00000613941 CEP152O94986 1710 aa17.38■□□□□ 0.37
SRSF3-204ENST00000613941 MBD5Q9P267 1494 aa17.37■□□□□ 0.37
SRSF3-204ENST00000613941 PHLPP1O60346 1717 aa17.35■□□□□ 0.37
SRSF3-204ENST00000613941 WASHC2CQ9Y4E1 1318 aa17.35■□□□□ 0.37
SRSF3-204ENST00000613941 RTEL1-TNFRSF6BF6WH68 1400 aa17.34■□□□□ 0.37
SRSF3-204ENST00000613941 SCAF11Q99590 1463 aaKnown RBP17.31■□□□□ 0.36
SRSF3-204ENST00000613941 CHIC1Q5VXU3 224 aa17.31■□□□□ 0.36
SRSF3-204ENST00000613941 FAM135BQ49AJ0 1406 aa17.3■□□□□ 0.36
SRSF3-204ENST00000613941 ERVK-7P63135 1459 aa17.3■□□□□ 0.36
SRSF3-204ENST00000613941 ABCC3O15438 1527 aa17.29■□□□□ 0.36
SRSF3-204ENST00000613941 CCDC141Q6ZP82 1450 aa17.28■□□□□ 0.36
SRSF3-204ENST00000613941 MAP3K1Q13233 1512 aa17.27■□□□□ 0.36
SRSF3-204ENST00000613941 NCOA2Q15596 1464 aa17.27■□□□□ 0.36
SRSF3-204ENST00000613941 MTUS2Q5JR59 1369 aa17.27■□□□□ 0.35
SRSF3-204ENST00000613941 UPF1Q92900 1129 aaKnown RBP eCLIP17.26■□□□□ 0.35
SRSF3-204ENST00000613941 SLIT1O75093 1534 aa17.25■□□□□ 0.35
SRSF3-204ENST00000613941 MROH1Q8NDA8 1641 aa17.25■□□□□ 0.35
SRSF3-204ENST00000613941 CAMSAP2Q08AD1 1489 aa17.24■□□□□ 0.35
SRSF3-204ENST00000613941 EHBP1L1Q8N3D4 1523 aa17.24■□□□□ 0.35
SRSF3-204ENST00000613941 PIK3C2BO00750 1634 aa17.24■□□□□ 0.35
SRSF3-204ENST00000613941 ARHGAP23Q9P227 1491 aa17.24■□□□□ 0.35
SRSF3-204ENST00000613941 LTKP29376 864 aa17.23■□□□□ 0.35
SRSF3-204ENST00000613941 TMEM94Q12767 1356 aa17.23■□□□□ 0.35
SRSF3-204ENST00000613941 COL16A1Q07092 1604 aaPredicted RBP17.22■□□□□ 0.35
SRSF3-204ENST00000613941 TRIM52Q96A61 297 aa17.22■□□□□ 0.35
SRSF3-204ENST00000613941 RBM33Q96EV2 1170 aaKnown RBP17.22■□□□□ 0.35
SRSF3-204ENST00000613941 LRP6O75581 1613 aa17.21■□□□□ 0.35
SRSF3-204ENST00000613941 EIF2AK4Q9P2K8 1649 aaKnown RBP17.21■□□□□ 0.35
SRSF3-204ENST00000613941 SRCAPQ6ZRS2 3230 aa17.21■□□□□ 0.34
SRSF3-204ENST00000613941 LRRC9Q6ZRR7 1453 aa17.2■□□□□ 0.34
SRSF3-204ENST00000613941 TXNDC2Q86VQ3 553 aa17.2■□□□□ 0.34
SRSF3-204ENST00000613941 ARHGEF5Q12774 1597 aa17.18■□□□□ 0.34
SRSF3-204ENST00000613941 JCADQ9P266 1359 aa17.16■□□□□ 0.34
SRSF3-204ENST00000613941 SHPRHQ149N8 1683 aa17.16■□□□□ 0.34
SRSF3-204ENST00000613941 NWD1Q149M9 1564 aa17.15■□□□□ 0.34
SRSF3-204ENST00000613941 CEP162Q5TB80 1403 aa17.14■□□□□ 0.33
SRSF3-204ENST00000613941 KDM5AP29375 1690 aaKnown RBP17.14■□□□□ 0.33
SRSF3-204ENST00000613941 PRDM15P57071 1507 aaPredicted RBP17.14■□□□□ 0.33
SRSF3-204ENST00000613941 PROSER2Q86WR7 435 aaPredicted RBP17.13■□□□□ 0.33
SRSF3-204ENST00000613941 CHD2O14647 1828 aaKnown RBP17.12■□□□□ 0.33
SRSF3-204ENST00000613941 MYO5BQ9ULV0 1848 aa17.12■□□□□ 0.33
SRSF3-204ENST00000613941 MAST1Q9Y2H9 1570 aa17.12■□□□□ 0.33
SRSF3-204ENST00000613941 TET3O43151 1660 aa17.12■□□□□ 0.33
SRSF3-204ENST00000613941 MEX3CQ5U5Q3 659 aaKnown RBP17.11■□□□□ 0.33
SRSF3-204ENST00000613941 EID1Q9Y6B2 187 aa17.11■□□□□ 0.33
SRSF3-204ENST00000613941 NKTRP30414 1462 aaKnown RBP17.11■□□□□ 0.33
SRSF3-204ENST00000613941 KCNA6P17658 529 aa17.09■□□□□ 0.33
SRSF3-204ENST00000613941 SLC26A8Q96RN1 970 aa17.09■□□□□ 0.33
SRSF3-204ENST00000613941 MSH6P52701 1360 aa17.09■□□□□ 0.33
SRSF3-204ENST00000613941 TMEM2Q9UHN6 1383 aa17.09■□□□□ 0.33
SRSF3-204ENST00000613941 EFCAB6Q5THR3 1501 aa17.09■□□□□ 0.33
SRSF3-204ENST00000613941 ZNF772Q68DY9 489 aaPredicted RBP17.08■□□□□ 0.32
SRSF3-204ENST00000613941 SLAIN2Q9P270 581 aa17.06■□□□□ 0.32
SRSF3-204ENST00000613941 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.05■□□□□ 0.32
SRSF3-204ENST00000613941 TSPY4P0CV99 314 aa17.05■□□□□ 0.32
SRSF3-204ENST00000613941 TSPY10P0CW01 314 aa17.05■□□□□ 0.32
SRSF3-204ENST00000613941 RSPH4AQ5TD94 716 aa17.05■□□□□ 0.32
SRSF3-204ENST00000613941 AHDC1Q5TGY3 1603 aaPredicted RBP17.05■□□□□ 0.32
SRSF3-204ENST00000613941 FGD6Q6ZV73 1430 aa17.04■□□□□ 0.32
SRSF3-204ENST00000613941 SPATA31A6Q5VVP1 1343 aa17.04■□□□□ 0.32
SRSF3-204ENST00000613941 RXRBP28702 533 aa17.04■□□□□ 0.32
SRSF3-204ENST00000613941 CDK12Q9NYV4 1490 aaPredicted RBP17.04■□□□□ 0.32
SRSF3-204ENST00000613941 STAG3Q9UJ98 1225 aa17.03■□□□□ 0.32
SRSF3-204ENST00000613941 DIP2AQ14689 1571 aa17.02■□□□□ 0.32
SRSF3-204ENST00000613941 ARHGAP31Q2M1Z3 1444 aa17.02■□□□□ 0.31
SRSF3-204ENST00000613941 DUOX2Q9NRD8 1548 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms