RNA–Protein interactions for RNA: ENST00000613098.4

PPARGC1A-217, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1A, Length 3,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-217ENST00000613098 ROCK2O75116 1388 aaKnown RBP10.07□□□□□ -0.8
PPARGC1A-217ENST00000613098 NUP155O75694 1391 aa10.07□□□□□ -0.8
PPARGC1A-217ENST00000613098 ZNF777Q9ULD5 760 aaPredicted RBP10.07□□□□□ -0.8
PPARGC1A-217ENST00000613098 BRD4O60885 1362 aaPredicted RBP10.07□□□□□ -0.8
PPARGC1A-217ENST00000613098 KIF15Q9NS87 1388 aa10.07□□□□□ -0.8
PPARGC1A-217ENST00000613098 DEKP35659 375 aaKnown RBP10.06□□□□□ -0.8
PPARGC1A-217ENST00000613098 PLA2R1Q13018 1463 aa10.06□□□□□ -0.8
PPARGC1A-217ENST00000613098 TRPM1Q7Z4N2 1603 aa10.06□□□□□ -0.8
PPARGC1A-217ENST00000613098 PARD3Q8TEW0 1356 aa10.06□□□□□ -0.8
PPARGC1A-217ENST00000613098 CARD11Q9BXL7 1154 aa10.06□□□□□ -0.8
PPARGC1A-217ENST00000613098 POLR3GLQ9BT43 218 aa10.05□□□□□ -0.8
PPARGC1A-217ENST00000613098 CCDC136Q96JN2 1154 aa10.05□□□□□ -0.8
PPARGC1A-217ENST00000613098 MYBBP1AQ9BQG0 1328 aaKnown RBP10.05□□□□□ -0.8
PPARGC1A-217ENST00000613098 PPRC1Q5VV67 1664 aaKnown RBP10.05□□□□□ -0.8
PPARGC1A-217ENST00000613098 IPO9Q96P70 1041 aaKnown RBP10.04□□□□□ -0.8
PPARGC1A-217ENST00000613098 EXOC6Q8TAG9 804 aa10.04□□□□□ -0.8
PPARGC1A-217ENST00000613098 TMC1Q8TDI8 760 aa10.04□□□□□ -0.8
PPARGC1A-217ENST00000613098 PRAG1Q86YV5 1406 aa10.04□□□□□ -0.8
PPARGC1A-217ENST00000613098 RRP1P56182 461 aaKnown RBP10.03□□□□□ -0.8
PPARGC1A-217ENST00000613098 ARHGEF5Q12774 1597 aa10.03□□□□□ -0.8
PPARGC1A-217ENST00000613098 ERICH6Q7L0X2 663 aa10.03□□□□□ -0.8
PPARGC1A-217ENST00000613098 DCAF11Q8TEB1 546 aa10.03□□□□□ -0.8
PPARGC1A-217ENST00000613098 KDM2AQ9Y2K7 1162 aa10.03□□□□□ -0.8
PPARGC1A-217ENST00000613098 FAM135AQ9P2D6 1515 aa10.03□□□□□ -0.8
PPARGC1A-217ENST00000613098 SAMD9LQ8IVG5 1584 aa10.02□□□□□ -0.8
PPARGC1A-217ENST00000613098 KTN1Q86UP2 1357 aaKnown RBP10.02□□□□□ -0.8
PPARGC1A-217ENST00000613098 NBPF1Q3BBV0 1214 aa10.02□□□□□ -0.81
PPARGC1A-217ENST00000613098 RALBP1Q15311 655 aa10.02□□□□□ -0.81
PPARGC1A-217ENST00000613098 CDCA7LQ96GN5 454 aa10.02□□□□□ -0.81
PPARGC1A-217ENST00000613098 JPH4Q96JJ6 628 aa10.02□□□□□ -0.81
PPARGC1A-217ENST00000613098 GPRASP1Q5JY77 1395 aa10.02□□□□□ -0.81
PPARGC1A-217ENST00000613098 HNRNPMP52272 730 aaKnown RBP eCLIP10.01□□□□□ -0.81
PPARGC1A-217ENST00000613098 TESK2Q96S53 571 aa10.01□□□□□ -0.81
PPARGC1A-217ENST00000613098 CDC42BPBQ9Y5S2 1711 aa10.01□□□□□ -0.81
PPARGC1A-217ENST00000613098 NBR1Q14596 966 aa10.01□□□□□ -0.81
PPARGC1A-217ENST00000613098 A2MP01023 1474 aa10□□□□□ -0.81
PPARGC1A-217ENST00000613098 DISP3Q9P2K9 1392 aa10□□□□□ -0.81
PPARGC1A-217ENST00000613098 PRDM15P57071 1507 aaPredicted RBP10□□□□□ -0.81
PPARGC1A-217ENST00000613098 BLMP54132 1417 aaPredicted RBP9.99□□□□□ -0.81
PPARGC1A-217ENST00000613098 COL17A1Q9UMD9 1497 aaPredicted RBP9.99□□□□□ -0.81
PPARGC1A-217ENST00000613098 SKAP1Q86WV1 359 aa9.99□□□□□ -0.81
PPARGC1A-217ENST00000613098 RCAN3Q9UKA8 241 aa9.99□□□□□ -0.81
PPARGC1A-217ENST00000613098 MYT1LQ9UL68 1186 aa9.98□□□□□ -0.81
PPARGC1A-217ENST00000613098 LAMC1P11047 1609 aa9.98□□□□□ -0.81
PPARGC1A-217ENST00000613098 MAP3K4Q9Y6R4 1608 aa9.98□□□□□ -0.81
PPARGC1A-217ENST00000613098 UNC13BO14795 1591 aa9.98□□□□□ -0.81
PPARGC1A-217ENST00000613098 NLRP13Q86W25 1043 aa9.97□□□□□ -0.81
PPARGC1A-217ENST00000613098 CHMP7Q8WUX9 453 aaPredicted RBP9.97□□□□□ -0.81
PPARGC1A-217ENST00000613098 PLEKHD1A6NEE1 506 aa9.97□□□□□ -0.81
PPARGC1A-217ENST00000613098 BACH2Q9BYV9 841 aa9.97□□□□□ -0.81
PPARGC1A-217ENST00000613098 PREX2Q70Z35 1606 aa9.97□□□□□ -0.81
PPARGC1A-217ENST00000613098 IQSEC2Q5JU85 1478 aa9.97□□□□□ -0.81
PPARGC1A-217ENST00000613098 CARMIL2Q6F5E8 1435 aa9.96□□□□□ -0.81
PPARGC1A-217ENST00000613098 SALL2Q9Y467 1007 aaPredicted RBP9.96□□□□□ -0.81
PPARGC1A-217ENST00000613098 INSRP06213 1382 aa9.96□□□□□ -0.81
PPARGC1A-217ENST00000613098 ZMYM4Q5VZL5 1548 aa9.96□□□□□ -0.82
PPARGC1A-217ENST00000613098 PLIN1O60240 522 aa9.96□□□□□ -0.82
PPARGC1A-217ENST00000613098 PDE4AP27815 886 aa9.96□□□□□ -0.82
PPARGC1A-217ENST00000613098 CCDC141Q6ZP82 1450 aa9.95□□□□□ -0.82
PPARGC1A-217ENST00000613098 HECW2Q9P2P5 1572 aa9.95□□□□□ -0.82
PPARGC1A-217ENST00000613098 MYO5CQ9NQX4 1742 aa9.95□□□□□ -0.82
PPARGC1A-217ENST00000613098 UHRF1BP1LA0JNW5 1464 aa9.94□□□□□ -0.82
PPARGC1A-217ENST00000613098 MAST1Q9Y2H9 1570 aa9.94□□□□□ -0.82
PPARGC1A-217ENST00000613098 MAGI2Q86UL8 1455 aa9.94□□□□□ -0.82
PPARGC1A-217ENST00000613098 PDE3BQ13370 1112 aa9.94□□□□□ -0.82
PPARGC1A-217ENST00000613098 C20orf194Q5TEA3 1177 aa9.94□□□□□ -0.82
PPARGC1A-217ENST00000613098 IQGAP3Q86VI3 1631 aa9.94□□□□□ -0.82
PPARGC1A-217ENST00000613098 TCERG1O14776 1098 aaKnown RBP9.94□□□□□ -0.82
PPARGC1A-217ENST00000613098 TSPY4P0CV99 314 aa9.94□□□□□ -0.82
PPARGC1A-217ENST00000613098 TSPY10P0CW01 314 aa9.94□□□□□ -0.82
PPARGC1A-217ENST00000613098 ANP32AP39687 249 aaKnown RBP9.94□□□□□ -0.82
PPARGC1A-217ENST00000613098 SYCP2Q9BX26 1530 aa9.93□□□□□ -0.82
PPARGC1A-217ENST00000613098 RNF17Q9BXT8 1623 aaKnown RBP9.93□□□□□ -0.82
PPARGC1A-217ENST00000613098 ZBTB47Q9UFB7 747 aaPredicted RBP9.93□□□□□ -0.82
PPARGC1A-217ENST00000613098 ATP10AO60312 1499 aa9.93□□□□□ -0.82
PPARGC1A-217ENST00000613098 WDR7Q9Y4E6 1490 aa9.93□□□□□ -0.82
PPARGC1A-217ENST00000613098 TTC37Q6PGP7 1564 aa9.93□□□□□ -0.82
PPARGC1A-217ENST00000613098 CCDC144AA2RUR9 1427 aa9.93□□□□□ -0.82
PPARGC1A-217ENST00000613098 PANK3Q9H999 370 aa9.92□□□□□ -0.82
PPARGC1A-217ENST00000613098 KDM2BQ8NHM5 1336 aa9.92□□□□□ -0.82
PPARGC1A-217ENST00000613098 RGL3Q3MIN7 710 aa9.92□□□□□ -0.82
PPARGC1A-217ENST00000613098 ERBINQ96RT1 1412 aa9.92□□□□□ -0.82
PPARGC1A-217ENST00000613098 WASHC2CQ9Y4E1 1318 aa9.92□□□□□ -0.82
PPARGC1A-217ENST00000613098 PLEKHH2Q8IVE3 1493 aa9.92□□□□□ -0.82
PPARGC1A-217ENST00000613098 FBLN2P98095 1184 aa9.92□□□□□ -0.82
PPARGC1A-217ENST00000613098 CC2D1BQ5T0F9 858 aaKnown RBP9.92□□□□□ -0.82
PPARGC1A-217ENST00000613098 ZNF521Q96K83 1311 aa9.91□□□□□ -0.82
PPARGC1A-217ENST00000613098 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.91□□□□□ -0.82
PPARGC1A-217ENST00000613098 PLEKHH1Q9ULM0 1364 aa9.91□□□□□ -0.82
PPARGC1A-217ENST00000613098 CRBNQ96SW2 442 aa9.91□□□□□ -0.82
PPARGC1A-217ENST00000613098 MS4A1P11836 297 aa9.91□□□□□ -0.82
PPARGC1A-217ENST00000613098 PLXNC1O60486 1568 aa9.9□□□□□ -0.82
PPARGC1A-217ENST00000613098 ILDR1Q86SU0 546 aaPredicted RBP9.9□□□□□ -0.82
PPARGC1A-217ENST00000613098 ADAMTS8Q9UP79 889 aa9.9□□□□□ -0.83
PPARGC1A-217ENST00000613098 DUSP27Q5VZP5 1158 aa9.88□□□□□ -0.83
PPARGC1A-217ENST00000613098 IQGAP1P46940 1657 aa9.88□□□□□ -0.83
PPARGC1A-217ENST00000613098 MADDQ8WXG6 1647 aa9.88□□□□□ -0.83
PPARGC1A-217ENST00000613098 AMER1Q5JTC6 1135 aaPredicted RBP9.88□□□□□ -0.83
PPARGC1A-217ENST00000613098 NPM2Q86SE8 214 aaKnown RBP9.88□□□□□ -0.83
PPARGC1A-217ENST00000613098 ADAMTSL3P82987 1691 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms