RNA–Protein interactions for RNA: ENST00000613060.4

SLC6A6-204, Transcript of solute carrier family 6 member 6, humanhuman

TSL 1 (best) BASIC

Gene SLC6A6, Length 6,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-204ENST00000613060 SCRIBQ14160 1630 aa14.99□□□□□ -0.01
SLC6A6-204ENST00000613060 SPAG9O60271 1321 aaKnown RBP14.99□□□□□ -0.01
SLC6A6-204ENST00000613060 CA8P35219 290 aa14.99□□□□□ -0.01
SLC6A6-204ENST00000613060 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.99□□□□□ -0.01
SLC6A6-204ENST00000613060 FAM177BA6PVY3 158 aa14.98□□□□□ -0.01
SLC6A6-204ENST00000613060 GBP4Q96PP9 640 aa14.98□□□□□ -0.01
SLC6A6-204ENST00000613060 ODF2Q5BJF6 829 aa14.98□□□□□ -0.01
SLC6A6-204ENST00000613060 PCMTD1Q96MG8 357 aaPredicted RBP14.98□□□□□ -0.01
SLC6A6-204ENST00000613060 SUPT16HQ9Y5B9 1047 aaKnown RBP14.98□□□□□ -0.01
SLC6A6-204ENST00000613060 TNNT3P45378 269 aaPredicted RBP14.97□□□□□ -0.01
SLC6A6-204ENST00000613060 CSPP1Q1MSJ5 1256 aa14.97□□□□□ -0.01
SLC6A6-204ENST00000613060 CLIP1P30622 1438 aa14.96□□□□□ -0.01
SLC6A6-204ENST00000613060 MIER1Q8N108 512 aa14.96□□□□□ -0.02
SLC6A6-204ENST00000613060 KIF3AQ9Y496 699 aa14.95□□□□□ -0.02
SLC6A6-204ENST00000613060 C1orf141Q5JVX7 400 aa14.94□□□□□ -0.02
SLC6A6-204ENST00000613060 NOP58Q9Y2X3 529 aaKnown RBP14.94□□□□□ -0.02
SLC6A6-204ENST00000613060 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.93□□□□□ -0.02
SLC6A6-204ENST00000613060 HMMRO75330 724 aa14.93□□□□□ -0.02
SLC6A6-204ENST00000613060 CT47A1Q5JQC4 288 aaPredicted RBP14.93□□□□□ -0.02
SLC6A6-204ENST00000613060 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.93□□□□□ -0.02
SLC6A6-204ENST00000613060 APPP05067 770 aa14.93□□□□□ -0.02
SLC6A6-204ENST00000613060 TPM2P07951 284 aa14.92□□□□□ -0.02
SLC6A6-204ENST00000613060 CCDC27Q2M243 656 aa14.92□□□□□ -0.02
SLC6A6-204ENST00000613060 TSR1Q2NL82 804 aaKnown RBP14.92□□□□□ -0.02
SLC6A6-204ENST00000613060 DCAF11Q8TEB1 546 aa14.91□□□□□ -0.02
SLC6A6-204ENST00000613060 TTLL12Q14166 644 aaPredicted RBP14.91□□□□□ -0.02
SLC6A6-204ENST00000613060 B4GALNT3Q6L9W6 998 aa14.91□□□□□ -0.02
SLC6A6-204ENST00000613060 ZCCHC6Q5VYS8 1495 aaKnown RBP14.91□□□□□ -0.02
SLC6A6-204ENST00000613060 TTC5Q8N0Z6 440 aa14.91□□□□□ -0.02
SLC6A6-204ENST00000613060 CCNB3Q8WWL7 1395 aa14.9□□□□□ -0.02
SLC6A6-204ENST00000613060 RWDD1Q9H446 243 aaPredicted RBP14.9□□□□□ -0.02
SLC6A6-204ENST00000613060 RBM5P52756 815 aaKnown RBP eCLIP14.9□□□□□ -0.02
SLC6A6-204ENST00000613060 CHMP4CQ96CF2 233 aa14.9□□□□□ -0.02
SLC6A6-204ENST00000613060 RTN4Q9NQC3 1192 aaKnown RBP14.9□□□□□ -0.02
SLC6A6-204ENST00000613060 ITPRIPQ8IWB1 547 aa14.89□□□□□ -0.03
SLC6A6-204ENST00000613060 C16orf71Q8IYS4 520 aaPredicted RBP14.89□□□□□ -0.03
SLC6A6-204ENST00000613060 CYB5RLQ6IPT4 315 aa14.89□□□□□ -0.03
SLC6A6-204ENST00000613060 SF3A1Q15459 793 aaKnown RBP14.88□□□□□ -0.03
SLC6A6-204ENST00000613060 U2AF1L5P0DN76 240 aaPredicted RBP14.88□□□□□ -0.03
SLC6A6-204ENST00000613060 U2AF1Q01081 240 aaKnown RBP eCLIP14.88□□□□□ -0.03
SLC6A6-204ENST00000613060 ATF3P18847 181 aa14.87□□□□□ -0.03
SLC6A6-204ENST00000613060 KDM4AO75164 1064 aa14.87□□□□□ -0.03
SLC6A6-204ENST00000613060 SYNE3Q6ZMZ3 975 aa14.87□□□□□ -0.03
SLC6A6-204ENST00000613060 TCERG1O14776 1098 aaKnown RBP14.86□□□□□ -0.03
SLC6A6-204ENST00000613060 PLIN1O60240 522 aa14.86□□□□□ -0.03
SLC6A6-204ENST00000613060 SETQ01105 290 aaPredicted RBP14.86□□□□□ -0.03
SLC6A6-204ENST00000613060 ATP2B2Q01814 1243 aa14.86□□□□□ -0.03
SLC6A6-204ENST00000613060 STAC3Q96MF2 364 aa14.85□□□□□ -0.03
SLC6A6-204ENST00000613060 MPHOSPH10O00566 681 aaKnown RBP14.85□□□□□ -0.03
SLC6A6-204ENST00000613060 RSPH4AQ5TD94 716 aa14.84□□□□□ -0.03
SLC6A6-204ENST00000613060 TPM1P09493 284 aa14.84□□□□□ -0.03
SLC6A6-204ENST00000613060 PSME1Q06323 249 aa14.84□□□□□ -0.03
SLC6A6-204ENST00000613060 FOXD4L5Q5VV16 416 aaPredicted RBP14.84□□□□□ -0.03
SLC6A6-204ENST00000613060 CCDC70Q6NSX1 233 aa14.84□□□□□ -0.03
SLC6A6-204ENST00000613060 FOXD4L4Q8WXT5 416 aaPredicted RBP14.84□□□□□ -0.03
SLC6A6-204ENST00000613060 KIF16BQ96L93 1317 aa14.83□□□□□ -0.03
SLC6A6-204ENST00000613060 CCAR2Q8N163 923 aaKnown RBP14.83□□□□□ -0.03
SLC6A6-204ENST00000613060 NECTIN2Q92692 538 aa14.83□□□□□ -0.04
SLC6A6-204ENST00000613060 PODXL2Q9NZ53 605 aa14.83□□□□□ -0.04
SLC6A6-204ENST00000613060 LMOD3Q0VAK6 560 aa14.83□□□□□ -0.04
SLC6A6-204ENST00000613060 CCDC47Q96A33 483 aaKnown RBP14.83□□□□□ -0.04
SLC6A6-204ENST00000613060 EIF2S2P20042 333 aaKnown RBP14.82□□□□□ -0.04
SLC6A6-204ENST00000613060 ECM2O94769 699 aaPredicted RBP14.82□□□□□ -0.04
SLC6A6-204ENST00000613060 STRN4Q9NRL3 753 aa14.81□□□□□ -0.04
SLC6A6-204ENST00000613060 WDHD1O75717 1129 aaPredicted RBP14.81□□□□□ -0.04
SLC6A6-204ENST00000613060 TERF2IPQ9NYB0 399 aa14.81□□□□□ -0.04
SLC6A6-204ENST00000613060 WASHC2AQ641Q2 1341 aa14.81□□□□□ -0.04
SLC6A6-204ENST00000613060 LRRFIP1Q32MZ4 808 aaKnown RBP14.81□□□□□ -0.04
SLC6A6-204ENST00000613060 HSP90AB2PQ58FF8 381 aa14.8□□□□□ -0.04
SLC6A6-204ENST00000613060 H3BQV1 296 aa14.8□□□□□ -0.04
SLC6A6-204ENST00000613060 IFFO2Q5TF58 517 aa14.8□□□□□ -0.04
SLC6A6-204ENST00000613060 TTC16Q8NEE8 873 aa14.8□□□□□ -0.04
SLC6A6-204ENST00000613060 EIF4G1Q04637 1599 aaKnown RBP14.8□□□□□ -0.04
SLC6A6-204ENST00000613060 KTN1Q86UP2 1357 aaKnown RBP14.79□□□□□ -0.04
SLC6A6-204ENST00000613060 PHF14O94880 888 aa14.79□□□□□ -0.04
SLC6A6-204ENST00000613060 RRP12Q5JTH9 1297 aaKnown RBP14.79□□□□□ -0.04
SLC6A6-204ENST00000613060 FOXD4L1Q9NU39 408 aa14.79□□□□□ -0.04
SLC6A6-204ENST00000613060 NEBLO76041 1014 aa14.79□□□□□ -0.04
SLC6A6-204ENST00000613060 PMFBP1Q8TBY8 1022 aa14.79□□□□□ -0.04
SLC6A6-204ENST00000613060 NAP1L1P55209 391 aaKnown RBP14.78□□□□□ -0.04
SLC6A6-204ENST00000613060 NFXL1Q6ZNB6 911 aa14.78□□□□□ -0.04
SLC6A6-204ENST00000613060 RFX1P22670 979 aa14.78□□□□□ -0.04
SLC6A6-204ENST00000613060 WDR78Q5VTH9 848 aa14.78□□□□□ -0.04
SLC6A6-204ENST00000613060 MCTP1Q6DN14 999 aa14.78□□□□□ -0.04
SLC6A6-204ENST00000613060 CPLX2Q6PUV4 134 aaKnown RBP14.77□□□□□ -0.04
SLC6A6-204ENST00000613060 FOSBP53539 338 aa14.77□□□□□ -0.04
SLC6A6-204ENST00000613060 MATR3P43243 847 aaKnown RBP eCLIP14.77□□□□□ -0.04
SLC6A6-204ENST00000613060 IPO7O95373 1038 aaKnown RBP14.77□□□□□ -0.05
SLC6A6-204ENST00000613060 CRBNQ96SW2 442 aa14.76□□□□□ -0.05
SLC6A6-204ENST00000613060 FAM184AQ8NB25 1140 aa14.76□□□□□ -0.05
SLC6A6-204ENST00000613060 SMC4Q9NTJ3 1288 aa14.75□□□□□ -0.05
SLC6A6-204ENST00000613060 EIF3AQ14152 1382 aaKnown RBP14.75□□□□□ -0.05
SLC6A6-204ENST00000613060 EPS15P42566 896 aa14.75□□□□□ -0.05
SLC6A6-204ENST00000613060 ANKRD20A12PQ8NF67 263 aa14.75□□□□□ -0.05
SLC6A6-204ENST00000613060 CBX1P83916 185 aa14.74□□□□□ -0.05
SLC6A6-204ENST00000613060 GPS2Q13227 327 aa14.74□□□□□ -0.05
SLC6A6-204ENST00000613060 RBM42Q9BTD8 480 aaKnown RBP14.74□□□□□ -0.05
SLC6A6-204ENST00000613060 ST18O60284 1047 aa14.74□□□□□ -0.05
SLC6A6-204ENST00000613060 TRIM29Q14134 588 aa14.74□□□□□ -0.05
SLC6A6-204ENST00000613060 SLKQ9H2G2 1235 aaPredicted RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms