RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 ACIN1Q9UKV3 1341 aaKnown RBP13.09□□□□□ -0.31
CCDC47-207ENST00000612558 GCC2Q8IWJ2 1684 aa13.09□□□□□ -0.31
CCDC47-207ENST00000612558 TSPY4P0CV99 314 aa13.08□□□□□ -0.32
CCDC47-207ENST00000612558 TSPY10P0CW01 314 aa13.08□□□□□ -0.32
CCDC47-207ENST00000612558 EFCAB2Q5VUJ9 269 aa13.08□□□□□ -0.32
CCDC47-207ENST00000612558 ARHGEF5Q12774 1597 aa13.08□□□□□ -0.32
CCDC47-207ENST00000612558 SAMD9LQ8IVG5 1584 aa13.08□□□□□ -0.32
CCDC47-207ENST00000612558 PLEKHH2Q8IVE3 1493 aa13.08□□□□□ -0.32
CCDC47-207ENST00000612558 HNRNPMP52272 730 aaKnown RBP eCLIP13.07□□□□□ -0.32
CCDC47-207ENST00000612558 RIMBP3CA6NJZ7 1639 aa13.07□□□□□ -0.32
CCDC47-207ENST00000612558 RIMBP3BA6NNM3 1639 aa13.07□□□□□ -0.32
CCDC47-207ENST00000612558 RIMBP3Q9UFD9 1639 aa13.07□□□□□ -0.32
CCDC47-207ENST00000612558 ADGRL2O95490 1459 aa13.07□□□□□ -0.32
CCDC47-207ENST00000612558 MBD5Q9P267 1494 aa13.07□□□□□ -0.32
CCDC47-207ENST00000612558 SHANK2Q9UPX8 1470 aa13.07□□□□□ -0.32
CCDC47-207ENST00000612558 CROCC2H7BZ55 1655 aa13.07□□□□□ -0.32
CCDC47-207ENST00000612558 NCOA1Q15788 1441 aa13.07□□□□□ -0.32
CCDC47-207ENST00000612558 KIAA1107Q9UPP5 1409 aa13.07□□□□□ -0.32
CCDC47-207ENST00000612558 CYB5RLQ6IPT4 315 aa13.07□□□□□ -0.32
CCDC47-207ENST00000612558 ARAP3Q8WWN8 1544 aa13.06□□□□□ -0.32
CCDC47-207ENST00000612558 ANKRD30AQ9BXX3 1397 aa13.06□□□□□ -0.32
CCDC47-207ENST00000612558 ADGBQ8N7X0 1667 aa13.06□□□□□ -0.32
CCDC47-207ENST00000612558 ABCA9Q8IUA7 1624 aa13.05□□□□□ -0.32
CCDC47-207ENST00000612558 C9orf84Q5VXU9 1444 aa13.04□□□□□ -0.32
CCDC47-207ENST00000612558 CCDC141Q6ZP82 1450 aa13.04□□□□□ -0.32
CCDC47-207ENST00000612558 TSPYL2Q9H2G4 693 aaPredicted RBP13.04□□□□□ -0.32
CCDC47-207ENST00000612558 MAPKBP1O60336 1514 aa13.04□□□□□ -0.32
CCDC47-207ENST00000612558 SLC39A7Q92504 469 aa13.03□□□□□ -0.32
CCDC47-207ENST00000612558 MS4A3Q96HJ5 214 aa13.03□□□□□ -0.32
CCDC47-207ENST00000612558 SYCP2Q9BX26 1530 aa13.02□□□□□ -0.32
CCDC47-207ENST00000612558 KDM6BO15054 1643 aa13.01□□□□□ -0.33
CCDC47-207ENST00000612558 C7P10643 843 aa13.01□□□□□ -0.33
CCDC47-207ENST00000612558 ASTLQ6HA08 431 aaPredicted RBP13.01□□□□□ -0.33
CCDC47-207ENST00000612558 TRIM52Q96A61 297 aa13.01□□□□□ -0.33
CCDC47-207ENST00000612558 OTUD5Q96G74 571 aa13.01□□□□□ -0.33
CCDC47-207ENST00000612558 MIER1Q8N108 512 aa12.99□□□□□ -0.33
CCDC47-207ENST00000612558 MAST1Q9Y2H9 1570 aa12.99□□□□□ -0.33
CCDC47-207ENST00000612558 ABCC1P33527 1531 aa12.99□□□□□ -0.33
CCDC47-207ENST00000612558 ARHGEF12Q9NZN5 1544 aa12.99□□□□□ -0.33
CCDC47-207ENST00000612558 FANCAO15360 1455 aa12.99□□□□□ -0.33
CCDC47-207ENST00000612558 ANKRD50Q9ULJ7 1429 aa12.98□□□□□ -0.33
CCDC47-207ENST00000612558 PELP1Q8IZL8 1130 aaKnown RBP12.98□□□□□ -0.33
CCDC47-207ENST00000612558 KIF15Q9NS87 1388 aa12.97□□□□□ -0.33
CCDC47-207ENST00000612558 ATMINO43313 823 aaPredicted RBP12.97□□□□□ -0.33
CCDC47-207ENST00000612558 MPHOSPH9Q99550 1183 aa12.97□□□□□ -0.33
CCDC47-207ENST00000612558 METRNQ9UJH8 293 aa12.97□□□□□ -0.33
CCDC47-207ENST00000612558 POTEB2H3BUK9 544 aa12.96□□□□□ -0.33
CCDC47-207ENST00000612558 CD109Q6YHK3 1445 aa12.96□□□□□ -0.34
CCDC47-207ENST00000612558 MAMSTRQ6ZN01 415 aa12.95□□□□□ -0.34
CCDC47-207ENST00000612558 TIMELESSQ9UNS1 1208 aa12.95□□□□□ -0.34
CCDC47-207ENST00000612558 CCDC61Q9Y6R9 512 aa12.95□□□□□ -0.34
CCDC47-207ENST00000612558 TRAPPC8Q9Y2L5 1435 aa12.95□□□□□ -0.34
CCDC47-207ENST00000612558 SIN3AQ96ST3 1273 aa12.94□□□□□ -0.34
CCDC47-207ENST00000612558 ADGRL1O94910 1474 aa12.93□□□□□ -0.34
CCDC47-207ENST00000612558 RTEL1-TNFRSF6BF6WH68 1400 aa12.93□□□□□ -0.34
CCDC47-207ENST00000612558 NEUROD1Q13562 356 aa12.93□□□□□ -0.34
CCDC47-207ENST00000612558 SPAG9O60271 1321 aaKnown RBP12.92□□□□□ -0.34
CCDC47-207ENST00000612558 PLXNC1O60486 1568 aa12.92□□□□□ -0.34
CCDC47-207ENST00000612558 SCAPERQ9BY12 1400 aa12.92□□□□□ -0.34
CCDC47-207ENST00000612558 AFAP1Q8N556 730 aa12.92□□□□□ -0.34
CCDC47-207ENST00000612558 DENND4BO75064 1496 aaPredicted RBP12.92□□□□□ -0.34
CCDC47-207ENST00000612558 CFAP74Q9C0B2 1584 aa12.91□□□□□ -0.34
CCDC47-207ENST00000612558 KIF12Q96FN5 646 aa12.9□□□□□ -0.34
CCDC47-207ENST00000612558 PLSCR2Q9NRY7 297 aa12.9□□□□□ -0.34
CCDC47-207ENST00000612558 GLI2P10070 1586 aa12.9□□□□□ -0.34
CCDC47-207ENST00000612558 DUOX2Q9NRD8 1548 aa12.89□□□□□ -0.35
CCDC47-207ENST00000612558 PZPP20742 1482 aa12.89□□□□□ -0.35
CCDC47-207ENST00000612558 NUP155O75694 1391 aa12.89□□□□□ -0.35
CCDC47-207ENST00000612558 ZBTB47Q9UFB7 747 aaPredicted RBP12.88□□□□□ -0.35
CCDC47-207ENST00000612558 NEO1Q92859 1461 aa12.88□□□□□ -0.35
CCDC47-207ENST00000612558 KDM5DQ9BY66 1539 aa12.87□□□□□ -0.35
CCDC47-207ENST00000612558 PLCD3Q8N3E9 789 aa12.87□□□□□ -0.35
CCDC47-207ENST00000612558 ERBINQ96RT1 1412 aa12.87□□□□□ -0.35
CCDC47-207ENST00000612558 MAP3K4Q9Y6R4 1608 aa12.87□□□□□ -0.35
CCDC47-207ENST00000612558 ANKRD30BQ9BXX2 1392 aa12.87□□□□□ -0.35
CCDC47-207ENST00000612558 FAM69CQ0P6D2 419 aa12.86□□□□□ -0.35
CCDC47-207ENST00000612558 ZNF518AQ6AHZ1 1483 aa12.86□□□□□ -0.35
CCDC47-207ENST00000612558 ZFYVE16Q7Z3T8 1539 aa12.86□□□□□ -0.35
CCDC47-207ENST00000612558 ATP7AQ04656 1500 aa12.85□□□□□ -0.35
CCDC47-207ENST00000612558 TONSLQ96HA7 1378 aa12.85□□□□□ -0.35
CCDC47-207ENST00000612558 INO80Q9ULG1 1556 aaPredicted RBP12.84□□□□□ -0.35
CCDC47-207ENST00000612558 ATN1P54259 1190 aaPredicted RBP12.84□□□□□ -0.35
CCDC47-207ENST00000612558 PKD2Q13563 968 aa12.84□□□□□ -0.35
CCDC47-207ENST00000612558 SCUBE2Q9NQ36 999 aa12.84□□□□□ -0.35
CCDC47-207ENST00000612558 MYT1LQ9UL68 1186 aa12.84□□□□□ -0.35
CCDC47-207ENST00000612558 DIP2BQ9P265 1576 aa12.84□□□□□ -0.35
CCDC47-207ENST00000612558 POGZQ7Z3K3 1410 aa12.83□□□□□ -0.35
CCDC47-207ENST00000612558 ZNF316A6NFI3 1004 aaPredicted RBP12.83□□□□□ -0.36
CCDC47-207ENST00000612558 PPP1R15AO75807 674 aaPredicted RBP12.83□□□□□ -0.36
CCDC47-207ENST00000612558 UNC13BO14795 1591 aa12.82□□□□□ -0.36
CCDC47-207ENST00000612558 TIE1P35590 1138 aa12.82□□□□□ -0.36
CCDC47-207ENST00000612558 KDM5CP41229 1560 aa12.81□□□□□ -0.36
CCDC47-207ENST00000612558 POTEMA6NI47 508 aa12.81□□□□□ -0.36
CCDC47-207ENST00000612558 MAP3K13O43283 966 aa12.81□□□□□ -0.36
CCDC47-207ENST00000612558 RASEFQ8IZ41 740 aa12.81□□□□□ -0.36
CCDC47-207ENST00000612558 DHX29Q7Z478 1369 aaKnown RBP12.81□□□□□ -0.36
CCDC47-207ENST00000612558 MLH3Q9UHC1 1453 aa12.81□□□□□ -0.36
CCDC47-207ENST00000612558 FAM135AQ9P2D6 1515 aa12.81□□□□□ -0.36
CCDC47-207ENST00000612558 MAGI2Q86UL8 1455 aa12.8□□□□□ -0.36
CCDC47-207ENST00000612558 KIDINS220Q9ULH0 1771 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 940.8 ms